| scholarly article | Q13442814 |
| P819 | ADS bibcode | 1995PNAS...92.2441B |
| P356 | DOI | 10.1073/PNAS.92.7.2441 |
| P932 | PMC publication ID | 42233 |
| P698 | PubMed publication ID | 7708661 |
| P5875 | ResearchGate publication ID | 15489846 |
| P2093 | author name string | Doolittle WF | |
| Brown JR | |||
| P2860 | cites work | Were the original eubacteria thermophiles? | Q43029321 |
| Horizontal transfer of ATPase genes--the tree of life becomes a net of life | Q47275652 | ||
| The TATA-binding protein: a general transcription factor in eukaryotes and archaebacteria | Q48082429 | ||
| A DNA fragment homologous to F1-ATPase beta subunit was amplified from genomic DNA of Methanosarcina barkeri. Indication of an archaebacterial F-type ATPase | Q48143411 | ||
| TFIIB, an evolutionary link between the transcription machineries of archaebacteria and eukaryotes | Q48153028 | ||
| Isolation and complete sequence of the yeast isoleucyl-tRNA synthetase gene (ILS1). | Q48304747 | ||
| Structure of the yeast valyl-tRNA synthetase gene (VASI) and the homology of its translated amino acid sequence with Escherichia coli isoleucyl-tRNA synthetase | Q48344324 | ||
| Primary structure of the alpha-subunit of vacuolar-type Na(+)-ATPase in Enterococcus hirae. Amplification of a 1000-bp fragment by polymerase chain reaction | Q67904723 | ||
| Simultaneous editing of multiple nucleic acid and protein sequences with ESEE | Q69693960 | ||
| DNA sequencing with chain-terminating inhibitors | Q22066207 | ||
| Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya | Q22066209 | ||
| Evidence that gene G7a in the human major histocompatibility complex encodes valyl-tRNA synthetase | Q24529584 | ||
| Phylogenetic structure of the prokaryotic domain: The primary kingdoms | Q24564821 | ||
| Multiple sequence alignment with hierarchical clustering | Q27860956 | ||
| The nature of the last universal ancestor and the root of the tree of life, still open questions | Q28213521 | ||
| Evolutionary relationships of bacterial and archaeal glutamine synthetase genes | Q28237950 | ||
| Comparative biochemistry of Archaea and Bacteria | Q28266085 | ||
| The sequence, and its evolutionary implications, of a Thermococcus celer protein associated with transcription | Q28775998 | ||
| Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs | Q29616422 | ||
| Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes | Q30004701 | ||
| Archaebacterial DNA-dependent RNA polymerases testify to the evolution of the eukaryotic nuclear genome | Q33862709 | ||
| Origin of the eukaryotic nucleus determined by rate-invariant analysis of rRNA sequences | Q34049657 | ||
| Evolution of the vacuolar H+-ATPase: implications for the origin of eukaryotes | Q34161454 | ||
| Recognition of tRNAs by aminoacyl-tRNA synthetases | Q34359502 | ||
| Evolution of translational elongation factor (EF) sequences: reliability of global phylogenies inferred from EF-1 alpha(Tu) and EF-2(G) proteins | Q35165063 | ||
| Transcription factor IID in the Archaea: sequences in the Thermococcus celer genome would encode a product closely related to the TATA-binding protein of eukaryotes | Q35219798 | ||
| Regulation of the nuclear genes encoding the cytoplasmic and mitochondrial leucyl-tRNA synthetases of Neurospora crassa | Q36794412 | ||
| Functional assembly of a randomly cleaved protein | Q36866599 | ||
| Early evolution and the origin of eukaryotes | Q37068338 | ||
| Evolution and relatedness in two aminoacyl-tRNA synthetase families | Q37594469 | ||
| The hydrogenosome | Q40724354 | ||
| Cognition, mechanism, and evolutionary relationships in aminoacyl-tRNA synthetases | Q40835301 | ||
| Molecular cloning of genes encoding major two subunits of a eubacterial V-type ATPase from Thermus thermophilus | Q41153410 | ||
| Isoleucyl-tRNA synthetase of Methanobacterium thermoautotrophicum Marburg. Cloning of the gene, nucleotide sequence, and localization of a base change conferring resistance to pseudomonic acid. | Q42628369 | ||
| A phylogenetic analysis of Aquifex pyrophilus | Q43029283 | ||
| P433 | issue | 7 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | gene duplication | Q746284 |
| P1104 | number of pages | 5 | |
| P304 | page(s) | 2441-2445 | |
| P577 | publication date | 1995-03-01 | |
| P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
| P1476 | title | Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications | |
| P478 | volume | 92 |
| Q35623949 | 3-hydroxy-3-methylglutaryl coenzyme A reductase of Sulfolobus solfataricus: DNA sequence, phylogeny, expression in Escherichia coli of the hmgA gene, and purification and kinetic characterization of the gene product |
| Q54134267 | A bacterial antibiotic resistance gene with eukaryotic origins. |
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| Q27663749 | A domain insertion in Escherichia coli GyrB adopts a novel fold that plays a critical role in gyrase function |
| Q28748516 | A duplicate gene rooting of seed plants and the phylogenetic position of flowering plants. |
| Q73616641 | A gene fusion event in the evolution of aminoacyl-tRNA synthetases |
| Q41016419 | A hot topic: the origin of hyperthermophiles |
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| Q41500207 | A present-day aminoacyl-tRNA synthetase with ancestral editing properties |
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| Q28728407 | Amino acid fermentation at the origin of the genetic code |
| Q38661414 | Aminoacyl-tRNA synthetases database |
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| Q36806192 | An archaebacterial homologue of the essential eubacterial cell division protein FtsZ. |
| Q33745975 | An autonomously replicating transforming vector for Sulfolobus solfataricus. |
| Q57220523 | An infB-Homolog in Sulfolobus acidocaldarius |
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| Q47230988 | Ancient gene duplications and the root(s) of the tree of life. |
| Q34174227 | Ancient horizontal gene transfer |
| Q24643523 | Archaea and the prokaryote-to-eukaryote transition |
| Q34150706 | Archaea: narrowing the gap between prokaryotes and eukaryotes |
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| Q28607624 | Changing ideas about eukaryotic origins |
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| Q36841973 | Complete genome sequences of cellular life forms: glimpses of theoretical evolutionary genomics |
| Q48251993 | Congruent evidence from alpha-tubulin and beta-tubulin gene phylogenies for a zygomycete origin of microsporidia |
| Q35950887 | Crystallization of leucyl-tRNA synthetase complexed with tRNALeu from the archaeon Pyrococcus horikoshii |
| Q41823780 | Decoding system for the AUA codon by tRNAIle with the UAU anticodon in Mycoplasma mobile. |
| Q28473043 | Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species |
| Q33685439 | Deep phylogeny--how a tree can help characterize early life on Earth. |
| Q24657492 | Determining divergence times with a protein clock: update and reevaluation |
| Q37879377 | Discontinuous occurrence of the hsp70 (dnaK) gene among Archaea and sequence features of HSP70 suggest a novel outlook on phylogenies inferred from this protein. |
| Q34556393 | Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism |
| Q22065289 | Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions |
| Q41100252 | Enzymes of central nitrogen metabolism from hyperthermophiles: characterization, thermostability, and genetics. |
| Q42661477 | Evidence for loss of mitochondria in Microsporidia from a mitochondrial-type HSP70 in Nosema locustae. |
| Q57263144 | Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles |
| Q38557234 | Evidence for the early divergence of tryptophanyl- and tyrosyl-tRNA synthetases |
| Q35994610 | Evidence that eukaryotic triosephosphate isomerase is of alpha-proteobacterial origin |
| Q28272750 | Evidence that two present-day components needed for the genetic code appeared after nucleated cells separated from eubacteria |
| Q33747061 | Evolution of the genetic code |
| Q35626017 | Evolutionary analysis of the hisCGABdFDEHI gene cluster from the archaeon Sulfolobus solfataricus P2 |
| Q46307159 | Evolutionary anomalies among the aminoacyl-tRNA synthetases |
| Q34383124 | Exchange of genetic markers at extremely high temperatures in the archaeon Sulfolobus acidocaldarius |
| Q28776201 | Fun with genealogy |
| Q30857265 | Generation of dominant selectable markers for resistance to pseudomonic acid by cloning and mutagenesis of the ileS gene from the archaeon Methanosarcina barkeri fusaro |
| Q24682727 | Genetic code origins: tRNAs older than their synthetases? |
| Q33970043 | Genetic recombination through double-strand break repair: shift from two-progeny mode to one-progeny mode by heterologous inserts. |
| Q33477246 | Genome beginnings: rooting the tree of life |
| Q28744447 | Genome networks root the tree of life between prokaryotic domains |
| Q34486185 | Genomewide comparison and novel ncRNAs of Aquificales. |
| Q43023816 | Higher-plant chloroplast and cytosolic 3-phosphoglycerate kinases: a case of endosymbiotic gene replacement. |
| Q28300405 | Higher-plant chloroplast and cytosolic fructose-1,6-bisphosphatase isoenzymes: origins via duplication rather than prokaryote-eukaryote divergence |
| Q52930706 | Horizontal gene transfer in aminoacyl-tRNA synthetases including leucine-specific subtypes. |
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| Q33643639 | Intracellular life |
| Q36869184 | Mapping of repetitive and non-repetitive DNA probes to chromosomes of the microsporidian Encephalitozoon cuniculi |
| Q38006475 | Microsporidia: Horizontal gene transfers in vicious parasites |
| Q30326996 | Microsporidia: emerging advances in understanding the basic biology of these unique organisms. |
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