review article | Q7318358 |
scholarly article | Q13442814 |
P356 | DOI | 10.1016/S0959-437X(99)00029-5 |
P8608 | Fatcat ID | release_s2dq6mrk7jboxmrkhs2soybwni |
P698 | PubMed publication ID | 10607614 |
P50 | author | Johann Peter Gogarten | Q42699520 |
P2093 | author name string | L Olendzenski | |
P2860 | cites work | Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii | Q22065564 |
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs | Q24545170 | ||
Improved tools for biological sequence comparison | Q24652199 | ||
The universal ancestor | Q24655363 | ||
Basic local alignment search tool | Q25938991 | ||
Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins | Q27734676 | ||
Rapid and sensitive protein similarity searches | Q27860496 | ||
The nature of the last universal ancestor and the root of the tree of life, still open questions | Q28213521 | ||
Phylogenetic origins and adaptive evolution of avian and mammalian haemoglobin genes | Q28262279 | ||
Molecular evidence for an ancient duplication of the entire yeast genome | Q29547472 | ||
Phylogenetic classification and the universal tree | Q29547749 | ||
Distinguishing Homologous from Analogous Proteins | Q29617777 | ||
The hydrogen hypothesis for the first eukaryote | Q29618266 | ||
Gleaning non-trivial structural, functional and evolutionary information about proteins by iterative database searches | Q29622868 | ||
Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes | Q30004701 | ||
Beyond complete genomes: from sequence to structure and function | Q32053512 | ||
Salmonella typhimurium mutants defective in flagellar filament regrowth and sequence similarity of FliI to F0F1, vacuolar, and archaebacterial ATPase subunits | Q33233253 | ||
Phylogenetic characterization of novel transport protein families revealed by genome analyses | Q33542669 | ||
The early evolution of cellular life. | Q33794020 | ||
The TATA-binding protein: a general transcription factor in eukaryotes and archaebacteria | Q48082429 | ||
Early evolutionary relationships among known life forms inferred from elongation factor EF-2/EF-G sequences: phylogenetic coherence and structure of the archaeal domain. | Q52443950 | ||
Protein evolution viewed through Escherichia coli protein sequences: introducing the notion of a structural segment of homology, the module. | Q54565622 | ||
Which is the most conserved group of proteins? Homology-orthology, paralogy, xenology, and the fusion of independent lineages. | Q54625126 | ||
Gene Duplication and Gene Conversion in the Caenorhabditis elegans Genome | Q57252805 | ||
MICROBIAL DIVERSITY: Domains and Kingdoms | Q63364424 | ||
Evolution of HSP70 gene and its implications regarding relationships between archaebacteria, eubacteria, and eukaryotes | Q72256874 | ||
Vertebrate genome evolution and the zebrafish gene map | Q74428368 | ||
Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history | Q33858354 | ||
Redundant genes | Q34087630 | ||
How long did it take for life to begin and evolve to cyanobacteria? | Q34089406 | ||
Origins of Prokaryotes, Eukaryotes, Mitochondria, and Chloroplasts | Q34102135 | ||
Archaea: narrowing the gap between prokaryotes and eukaryotes | Q34150706 | ||
Evolution of the vacuolar H+-ATPase: implications for the origin of eukaryotes | Q34161454 | ||
Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications | Q34308020 | ||
Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse | Q34364325 | ||
Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea | Q34447405 | ||
The root of the universal tree of life inferred from anciently duplicated genes encoding components of the protein-targeting machinery | Q34478068 | ||
Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements | Q34482580 | ||
Comparison of the complete protein sets of worm and yeast: orthology and divergence | Q34670114 | ||
Protein sequence similarity searches using patterns as seeds | Q34675542 | ||
A common fold for peptide synthetases cleaving ATP to ADP: glutathione synthetase and D-alanine:d-alanine ligase of Escherichia coli | Q34699710 | ||
Was the nucleus the first endosymbiont? | Q35140886 | ||
Transcription factor IID in the Archaea: sequences in the Thermococcus celer genome would encode a product closely related to the TATA-binding protein of eukaryotes | Q35219798 | ||
Phylogenetic analysis of sequences from diverse bacteria with homology to the Escherichia coli rho gene | Q35968251 | ||
Cloning of the HSP70 gene from Halobacterium marismortui: relatedness of archaebacterial HSP70 to its eubacterial homologs and a model for the evolution of the HSP70 gene | Q36114051 | ||
Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species | Q36444499 | ||
Extent of genomic rearrangement after genome duplication in yeast | Q36474872 | ||
Fine-resolution analysis of products of intrachromosomal homeologous recombination in mammalian cells | Q36569027 | ||
Fine-resolution mapping of spontaneous and double-strand break-induced gene conversion tracts in Saccharomyces cerevisiae reveals reversible mitotic conversion polarity | Q36654609 | ||
Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships | Q37379451 | ||
The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny. | Q37437877 | ||
Widespread protein sequence similarities: origins of Escherichia coli genes | Q39836061 | ||
Convergent evolution: the need to be explicit | Q40731512 | ||
The evolution of the Calvin cycle from prokaryotic to eukaryotic chromosomes: a case study of functional redundancy in ancient pathways through endosymbiosis. | Q41600941 | ||
Vertebrate genome evolution--the decade ahead | Q41673731 | ||
The prokaryote-to-eukaryote transition reflected in the evolution of the V/F/A-ATPase catalytic and proteolipid subunits | Q42678406 | ||
Convergent evolution of amino acid usage in archaebacterial and eubacterial lineages adapted to high salt | Q43022308 | ||
Microbial genome analyses: global comparisons of transport capabilities based on phylogenies, bioenergetics and substrate specificities | Q44409666 | ||
Horizontal transfer of ATPase genes--the tree of life becomes a net of life | Q47275652 | ||
Evolution of proton pumping ATPases: Rooting the tree of life | Q47701067 | ||
Evidence for Ancient Tetraploidy and Conservation of Linkage Groups in Mammalian Chromosomes | Q47724944 | ||
Eukaryote genome duplication - where's the evidence? | Q47730493 | ||
The evolution of the type I interferons | Q47744095 | ||
Ancient large-scale genome duplications: phylogenetic and linkage analyses shed light on chordate genome evolution | Q47750405 | ||
Evidence of independent gene duplications during the evolution of archaeal and eukaryotic family B DNA polymerases | Q48025453 | ||
P433 | issue | 6 | |
P304 | page(s) | 630-636 | |
P577 | publication date | 1999-12-01 | |
P1433 | published in | Current Opinion in Genetics & Development | Q13505684 |
P1476 | title | Orthologs, paralogs and genome comparisons | |
P478 | volume | 9 |
Q34418441 | A comparative genomics approach for studying ancestral proteins and evolution. |
Q60400396 | A genomic duplication in Arabidopsis thaliana contains a sequence similar to the human gene coding for SAP130 |
Q28607498 | A phylogenomic data-driven exploration of viral origins and evolution |
Q38473816 | A tree of cellular life inferred from a genomic census of molecular functions |
Q24797719 | Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes |
Q26824361 | Archaea: the first domain of diversified life |
Q52004454 | Birth, life and death of developmental control genes: new challenges for the homology concept. |
Q24805023 | Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses |
Q38353081 | Characterization of multiple CYP9A genes in the silkworm, Bombyx mori |
Q41814238 | Cloning of an emopamil-binding protein (EBP)-like protein that lacks sterol delta8-delta7 isomerase activity |
Q35176069 | Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: a test case in the euasterid plant clade |
Q28710072 | Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa |
Q42862990 | Comparative genome analysis of Solanum lycopersicum and Solanum tuberosum |
Q60460328 | Comparative genome mapping among Picea glauca, P. mariana × P. rubens and P. abies, and correspondence with other Pinaceae |
Q24791651 | Comparative genomics of gene-family size in closely related bacteria |
Q30821302 | Comprehensive analysis of orthologous protein domains using the HOPS database |
Q62570588 | Concepts of the last eukaryotic common ancestor |
Q35004290 | Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA) |
Q63977523 | Current awareness |
Q30665057 | Distinctive features of homologous recombination in an 'old' microorganism, Lactococcus lactis. |
Q33612692 | Diverse alkane hydroxylase genes in microorganisms and environments |
Q33491777 | Do potatoes and tomatoes have a single evolutionary history, and what proportion of the genome supports this history? |
Q33315464 | Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce |
Q52637989 | Evolution of Melanoma Antigen-A11 (MAGEA11) During Primate Phylogeny. |
Q35038116 | Evolution of intron/exon structure of DEAD helicase family genes in Arabidopsis, Caenorhabditis, and Drosophila |
Q35213433 | Evolution of photosynthetic prokaryotes: a maximum-likelihood mapping approach |
Q36847723 | From manual curation to visualization of gene families and networks across Solanaceae plant species |
Q39678808 | Gene transfer between Salmonella enterica serovar Typhimurium inside epithelial cells |
Q34447824 | Horizontal gene transfer, genome innovation and evolution |
Q33479358 | Identifying concerted evolution and gene conversion in mammalian gene pairs lasting over 100 million years |
Q35586786 | Identifying single copy orthologs in Metazoa |
Q55344083 | Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola. |
Q33305446 | Leptospira interrogans endostatin-like outer membrane proteins bind host fibronectin, laminin and regulators of complement |
Q30351304 | Merging protein, gene and genomic data: the evolution of the MDR-ADH family. |
Q35008419 | Miocene-Pliocene speciation, introgression, and migration of Patis and Ptilagrostis (Poaceae: Stipeae). |
Q47982598 | Molecular clock and gene function |
Q28775659 | Molecular evolution of receptor-like kinase genes in hexaploid wheat. Independent evolution of orthologs after polyploidization and mechanisms of local rearrangements at paralogous loci |
Q34280166 | Multiple alignment of complete sequences (MACS) in the post-genomic era. |
Q41674375 | Mutation-prone points in KCNQ. |
Q80158522 | Mutation-prone points in thrombin receptor |
Q51628439 | Mutation-prone positions within the estrogen receptor. |
Q37490530 | On the origin and evolutionary history of NANOG. |
Q44813182 | Phylogenetic analysis of Ciona intestinalis gene superfamilies supports the hypothesis of successive gene expansions. |
Q33272850 | Phylogenetic signal and functional categories in Proteobacteria genomes |
Q34443578 | Phylogenomic study indicates widespread lateral gene transfer in Entamoeba and suggests a past intimate relationship with parabasalids. |
Q35000502 | Progress in bioinformatics and the importance of being earnest. |
Q29617350 | Prokaryotic evolution in light of gene transfer |
Q28141566 | The human cytochrome P450 3A locus. Gene evolution by capture of downstream exons |
Q24795433 | The intein of the Thermoplasma A-ATPase A subunit: structure, evolution and expression in E. coli |
Q47814074 | The murine DSCR1-like (Down syndrome candidate region 1) gene family: conserved synteny with the human orthologous genes. |
Q21296637 | The role of reticulate evolution in creating innovation and complexity |
Q24800474 | The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana |
Q41432832 | The two paralogue phoN (phosphinothricin acetyl transferase) genes of Pseudomonas putida encode functionally different proteins |
Q57258889 | Transfer RNA paralogs: evidence for genetic code-amino acid biosynthesis coevolution and an archaeal root of life |
Q30328440 | Which craft is best in bioinformatics? |
Q40414224 | Whole-genome trees based on the occurrence of folds and orthologs: implications for comparing genomes on different levels |
Q30002339 | eggNOG v4.0: nested orthology inference across 3686 organisms |
Search more.