Biochemical analysis of pistol self-cleaving ribozymes.

scientific article

Biochemical analysis of pistol self-cleaving ribozymes. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1261/RNA.052514.115
P932PMC publication ID4604425
P698PubMed publication ID26385507
P5875ResearchGate publication ID282048193

P50authorRonald BreakerQ2165727
Kimberly A HarrisQ57232771
P2093author name stringSanshu Li
Christina E Lünse
Kenneth I Brewer
P2860cites workEngineered allosteric ribozymes that respond to specific divalent metal ionsQ24801482
Crystal structure and mechanistic investigation of the twister ribozymeQ27694565
Autolytic processing of dimeric plant virus satellite RNAQ28247672
Catalytic strategies of self-cleaving ribozymesQ28288343
New classes of self-cleaving ribozymes revealed by comparative genomics analysisQ28314889
Small Self-cleaving RibozymesQ28749189
NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policyQ29617901
R2R--software to speed the depiction of aesthetic consensus RNA secondary structuresQ33785428
Ribozyme structures and mechanismsQ34019400
Widespread genetic switches and toxicity resistance proteins for fluorideQ34029970
A widespread self-cleaving ribozyme class is revealed by bioinformatics.Q34385600
Structural basis for the fast self-cleavage reaction catalyzed by the twister ribozymeQ34435180
In-line alignment and Mg²⁺ coordination at the cleavage site of the env22 twister ribozymeQ34448630
The role of metal ions in RNA catalysisQ34749886
Ribozyme speed limitsQ35180337
Diastereomers of the nucleoside phosphorothioates as probes of the structure of the metal nucleotide substrates and of the nucleotide binding site of yeast hexokinaseQ41119755
A common speed limit for RNA-cleaving ribozymes and deoxyribozymesQ41965801
Mechanisms of RNA catalysisQ42871879
Characterization of a DNA-cleaving deoxyribozymeQ43737764
Fast Cleavage Kinetics of a Natural Hammerhead RibozymeQ58044980
Cooperative disordering of single-stranded polynucleotides through copper crosslinkingQ67808388
Metallobiochemistry of RNA. Co(NH3)63+ as a probe for Mg2+(aq) binding sitesQ72070085
P4510describes a project that usesImageQuantQ112270642
P433issue11
P407language of work or nameEnglishQ1860
P921main subjectribozymeQ205858
P304page(s)1852-1858
P577publication date2015-09-18
P1433published inRNAQ7277164
P1476titleBiochemical analysis of pistol self-cleaving ribozymes
P478volume21

Reverse relations

cites work (P2860)
Q48351881An Exceptionally Selective DNA Cooperatively Binding Two Ca2+ Ions.
Q48369976Atom-Specific Mutagenesis Reveals Structural and Catalytic Roles for an Active-Site Adenosine and Hydrated Mg2+ in Pistol Ribozymes.
Q93135952Classification of the nucleolytic ribozymes based upon catalytic mechanism
Q64094589Comparison of the Structures and Mechanisms of the Pistol and Hammerhead Ribozymes
Q91719478Crucial Roles of Two Hydrated Mg2+ Ions in Reaction Catalysis of the Pistol Ribozyme
Q41862903Crystal structure of Pistol, a class of self-cleaving ribozyme
Q47375249Direct screening for ribozyme activity in mammalian cells.
Q42154094Facile synthesis of a 3-deazaadenosine phosphoramidite for RNA solid-phase synthesis
Q59806899Generation of 2',3'-Cyclic Phosphate-Containing RNAs as a Hidden Layer of the Transcriptome
Q38964415Mechanistic Debris Generated by Twister Ribozymes
Q37450797Molecular Dynamics Study of Twister Ribozyme: Role of Mg(2+) Ions and the Hydrogen-Bonding Network in the Active Site
Q45873878Multi-metal-dependent nucleic acid enzymes
Q90029453Novel ribozymes: discovery, catalytic mechanisms, and the quest to understand biological function
Q46242768Nucleic acids: function and potential for abiogenesis
Q50476242Numerous small hammerhead ribozyme variants associated with Penelope-like retrotransposons cleave RNA as dimers
Q34533725Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage
Q47235409RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.
Q26748796RNA systems biology: uniting functional discoveries and structural tools to understand global roles of RNAs
Q39776551Rational engineering of the Neurospora VS ribozyme to allow substrate recognition via different kissing-loop interactions
Q89165910SHAPE probing pictures Mg2+-dependent folding of small self-cleaving ribozymes
Q38820529Structural and Biochemical Properties of Novel Self-Cleaving Ribozymes
Q26740637Thirty-five years of research into ribozymes and nucleic acid catalysis: where do we stand today?

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