| scholarly article | Q13442814 |
| review article | Q7318358 |
| P356 | DOI | 10.1021/AR800050C |
| P8608 | Fatcat ID | release_p6zgnrvznnd27o6uki35drbiay |
| P3181 | OpenCitations bibliographic resource ID | 4595972 |
| P698 | PubMed publication ID | 18652494 |
| P2093 | author name string | Jesse C Cochrane | |
| Scott A Strobel | |||
| P433 | issue | 8 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | ribozyme | Q205858 |
| P304 | page(s) | 1027-35 | |
| P577 | publication date | 2008-08-01 | |
| P1433 | published in | Accounts of Chemical Research | Q899474 |
| P1476 | title | Catalytic strategies of self-cleaving ribozymes | |
| P478 | volume | 41 |
| Q85194938 | 2′-Amino-Modified Ribonucleotides as Probes for Local Interactions Within RNA |
| Q34385600 | A widespread self-cleaving ribozyme class is revealed by bioinformatics. |
| Q37004094 | Ambient-Potential Composite Ewald Method for ab Initio Quantum Mechanical/Molecular Mechanical Molecular Dynamics Simulation |
| Q39016303 | An active-site guanine participates in glmS ribozyme catalysis in its protonated state |
| Q84854706 | Behavior of a hammerhead ribozyme in aqueous solution at medium to high temperatures |
| Q34494793 | Biochemical analysis of pistol self-cleaving ribozymes. |
| Q36561838 | Bridging the gap between theory and experiment to derive a detailed understanding of hammerhead ribozyme catalysis |
| Q47389545 | Capreomycin and hygromycin B modulate the catalytic activity of the delta ribozyme in a manner that depends on the protonation and complexation with Cu2+ ions of these antibiotics |
| Q39298283 | Cas6 processes tight and relaxed repeat RNA via multiple mechanisms: A hypothesis |
| Q92745933 | Catalytic Nucleic Acids: Biochemistry, Chemical Biology, Biosensors, and Nanotechnology |
| Q41095160 | Chemical feasibility of the general acid/base mechanism of glmS ribozyme self-cleavage |
| Q37498611 | Cobalt(III)hexaammine-dependent photocrosslinks in the hairpin ribozyme |
| Q91719478 | Crucial Roles of Two Hydrated Mg2+ Ions in Reaction Catalysis of the Pistol Ribozyme |
| Q34496044 | Crystal structure of the Varkud satellite ribozyme |
| Q27678649 | Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA |
| Q36984202 | DNA catalysis of a normally disfavored RNA hydrolysis reaction. |
| Q42602688 | Developing three-dimensional models of putative-folding intermediates of the HDV ribozyme |
| Q43143817 | Direct measurement of the ionization state of an essential guanine in the hairpin ribozyme |
| Q38296308 | Direct observation of multiple tautomers of oxythiamine and their recognition by the thiamine pyrophosphate riboswitch |
| Q33774434 | Efficient inhibition of hepatitis B virus replication by hepatitis delta virus ribozymes delivered by targeting retrovirus |
| Q37545363 | Engineering ligand-responsive gene-control elements: lessons learned from natural riboswitches |
| Q33475296 | Exploring ribozyme conformational changes with X-ray crystallography |
| Q40623105 | Extensive molecular dynamics simulations showing that canonical G8 and protonated A38H+ forms are most consistent with crystal structures of hairpin ribozyme |
| Q91651366 | From general base to general acid catalysis in a sodium-specific DNAzyme by a guanine-to-adenine mutation |
| Q40982529 | Hammerhead Ribozymes in Archaeal Genomes: A Computational Hunt. |
| Q36960961 | High-throughput SHAPE and hydroxyl radical analysis of RNA structure and ribonucleoprotein assembly |
| Q34991122 | Hydrolysis of bulged nucleotides in hybrids formed by RNA and imidazole-derivatized oligo-2'-O-methylribonucleotides |
| Q27654589 | Identification of an Imino Group Indispensable for Cleavage by a Small Ribozyme |
| Q24635279 | Identification of an hepatitis delta virus-like ribozyme at the mRNA 5'-end of the L1Tc retrotransposon from Trypanosoma cruzi |
| Q21145325 | Identification of hammerhead ribozymes in all domains of life reveals novel structural variations |
| Q42317916 | In vitro selection of glmS ribozymes |
| Q34448630 | In-line alignment and Mg²⁺ coordination at the cleavage site of the env22 twister ribozyme |
| Q38734268 | Insights into RNA structure and dynamics from recent NMR and X-ray studies of the Neurospora Varkud satellite ribozyme. |
| Q36901778 | Intermolecular domain docking in the hairpin ribozyme: metal dependence, binding kinetics and catalysis |
| Q45114970 | Intramolecular participation of amino groups in the cleavage and isomerization of ribonucleoside 3'-phosphodiesters: the role in stabilization of the phosphorane intermediate |
| Q38316764 | Mapping the interactions of selected antibiotics and their Cu2+ complexes with the antigenomic δ ribozyme. |
| Q37264379 | Mechanism of endonuclease cleavage by the HigB toxin |
| Q35608554 | Mechanistic insights into RNA transphosphorylation from kinetic isotope effects and linear free energy relationships of model reactions. |
| Q41834871 | Metal binding and substrate positioning by evolutionarily invariant U6 sequences in catalytically active protein-free snRNAs |
| Q34225437 | Metal ions: supporting actors in the playbook of small ribozymes |
| Q38649173 | Model for the Functional Active State of the TS Ribozyme from Molecular Simulation |
| Q37455511 | Model systems: how chemical biologists study RNA. |
| Q37589504 | Modulating RNA structure and catalysis: lessons from small cleaving ribozymes |
| Q37450797 | Molecular Dynamics Study of Twister Ribozyme: Role of Mg(2+) Ions and the Hydrogen-Bonding Network in the Active Site |
| Q37142097 | Molecular dynamics suggest multifunctionality of an adenine imino group in acid-base catalysis of the hairpin ribozyme. |
| Q36540017 | Multiscale methods for computational RNA enzymology. |
| Q27681056 | NMR Localization of Divalent Cations at the Active Site of the Neurospora VS Ribozyme Provides Insights into RNA–Metal-Ion Interactions |
| Q27666728 | NMR structure of the A730 loop of the Neurospora VS ribozyme: insights into the formation of the active site |
| Q90029453 | Novel ribozymes: discovery, catalytic mechanisms, and the quest to understand biological function |
| Q37790458 | Nucleases: diversity of structure, function and mechanism. |
| Q33799139 | On the role of Hoogsteen:Hoogsteen interactions in RNA: ab initio investigations of structures and energies |
| Q59113204 | Perspectives on the Emerging Applications of Multifaceted Biomedical Polymeric Nanomaterials |
| Q34533725 | Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage |
| Q24598064 | Pr77 and L1TcRz |
| Q42292919 | Pressure modulates the self-cleavage step of the hairpin ribozyme |
| Q34059491 | Protein and RNA engineering to customize microbial molecular reporting |
| Q41809931 | Protonation states of the key active site residues and structural dynamics of the glmS riboswitch as revealed by molecular dynamics |
| Q39354341 | QM/MM studies of hairpin ribozyme self-cleavage suggest the feasibility of multiple competing reaction mechanisms |
| Q60952047 | Quantum Mechanical/Molecular Mechanical Analysis of the Catalytic Mechanism of Phosphoserine Phosphatase |
| Q24619572 | R2 retrotransposons encode a self-cleaving ribozyme for processing from an rRNA cotranscript |
| Q40309869 | RNA self-cleavage activated by ultraviolet light-induced oxidation |
| Q27022554 | RNA tectonics (tectoRNA) for RNA nanostructure design and its application in synthetic biology |
| Q27676664 | Recognition and Cleavage of a Nonstructured CRISPR RNA by Its Processing Endoribonuclease Cas6 |
| Q34761573 | Role of tautomerism in RNA biochemistry |
| Q40913394 | Sequence-controlled RNA self-processing: computational design, biochemical analysis, and visualization by AFM. |
| Q24594199 | Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme |
| Q92921442 | Tautomerism of Guanine Analogues |
| Q39068213 | The Hammerhead Ribozyme: A Long History for a Short RNA. |
| Q42531422 | The NMR structure of the II-III-VI three-way junction from the Neurospora VS ribozyme reveals a critical tertiary interaction and provides new insights into the global ribozyme structure |
| Q27646567 | The Structural Basis for mRNA Recognition and Cleavage by the Ribosome-Dependent Endonuclease RelE |
| Q42177302 | The shape-shifting quasispecies of RNA: one sequence, many functional folds |
| Q37366654 | Theoretical studies of RNA catalysis: hybrid QM/MM methods and their comparison with MD and QM. |
| Q42224370 | Unfolding of in planta activity of anti-rep ribozyme in presence of a RNA silencing suppressor |
| Q33614080 | Unwinding the twister ribozyme: from structure to mechanism |
| Q42151745 | Visualizing transient Watson-Crick-like mispairs in DNA and RNA duplexes |
| Q42869072 | glmS Riboswitch binding to the glucosamine-6-phosphate α-anomer shifts the pKa toward neutrality |
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