| scholarly article | Q13442814 |
| P50 | author | Júlia Viladoms | Q83139729 |
| P2093 | author name string | Martha J Fedor | |
| Lincoln G Scott | |||
| P2860 | cites work | Self-sustained replication of an RNA enzyme | Q22065854 |
| New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control | Q24564877 | ||
| Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme | Q24594199 | ||
| Riboswitch effectors as protein enzyme cofactors | Q24652676 | ||
| Structural investigation of the GlmS ribozyme bound to Its catalytic cofactor | Q24670513 | ||
| Mechanism of mRNA destabilization by the glmS ribozyme | Q24680823 | ||
| Core requirements for glmS ribozyme self-cleavage reveal a putative pseudoknot structure | Q25257465 | ||
| Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis | Q27631159 | ||
| Requirement of Helix P2.2 and Nucleotide G1 for Positioning the Cleavage Site and Cofactor of the glmS Ribozyme | Q27647856 | ||
| Essential role of an active-site guanine in glmS ribozyme catalysis | Q27648983 | ||
| A 1.9 A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage | Q27663796 | ||
| Ribonuclease A | Q28201882 | ||
| Backbone and nucleobase contacts to glucosamine-6-phosphate in the glmS ribozyme | Q28240090 | ||
| Control of gene expression by a natural metabolite-responsive ribozyme | Q28251218 | ||
| Structural basis of glmS ribozyme activation by glucosamine-6-phosphate | Q28264810 | ||
| Catalytic strategies of self-cleaving ribozymes | Q28288343 | ||
| TheglmSribozyme: use of a small molecule coenzyme by a gene-regulatory RNA | Q28728642 | ||
| Small Self-cleaving Ribozymes | Q28749189 | ||
| Synthesis of small RNAs using T7 RNA polymerase | Q29615997 | ||
| Relationship between internucleotide linkage geometry and the stability of RNA. | Q34362161 | ||
| Deciphering the role of glucosamine-6-phosphate in the riboswitch action of glmS ribozyme | Q34370143 | ||
| Glucosamine-6-phosphate synthase--the multi-facets enzyme. | Q34666978 | ||
| The pH dependence of hairpin ribozyme catalysis reflects ionization of an active site adenine | Q34978942 | ||
| Mechanistic considerations for general acid-base catalysis by RNA: revisiting the mechanism of the hairpin ribozyme | Q35071324 | ||
| Ribozyme speed limits | Q35180337 | ||
| The glmS ribozyme tunes the catalytically critical pK(a) of its coenzyme glucosamine-6-phosphate | Q35217480 | ||
| Analysis of metal ion dependence in glmS ribozyme self-cleavage and coenzyme binding | Q35650668 | ||
| 'In-line attack' conformational effect plays a modest role in an enzyme-catalyzed RNA cleavage: a free energy simulation study | Q35891634 | ||
| Nucleobase catalysis in ribozyme mechanism | Q36578719 | ||
| Synthesis of RNA probes by the direct in vitro transcription of PCR-generated DNA templates | Q36784840 | ||
| Comparative enzymology and structural biology of RNA self-cleavage | Q37470678 | ||
| 1 Phosphoribosylprophosphate synthetase (ribose-5-phosphate pyrophosphokinase) from Salmonella typhimurium | Q40172913 | ||
| A pseudoknot in the 3' non-core region of the glmS ribozyme enhances self-cleavage activity | Q40346444 | ||
| Tertiary structure stabilization promotes hairpin ribozyme ligation | Q41686849 | ||
| Preparation of specifically 2H- and 13C-labeled ribonucleotides | Q41738202 | ||
| Protonation states of the key active site residues and structural dynamics of the glmS riboswitch as revealed by molecular dynamics | Q41809931 | ||
| An expanded collection and refined consensus model of glmS ribozymes | Q42052505 | ||
| Trans-acting glmS catalytic riboswitch: locked and loaded | Q42094848 | ||
| Rapid steps in the glmS ribozyme catalytic pathway: cation and ligand requirements | Q42726378 | ||
| glmS Riboswitch binding to the glucosamine-6-phosphate α-anomer shifts the pKa toward neutrality | Q42869072 | ||
| Direct measurement of the ionization state of an essential guanine in the hairpin ribozyme | Q43143817 | ||
| Characteristics of the glmS ribozyme suggest only structural roles for divalent metal ions. | Q43256741 | ||
| 8-Aza-2'-deoxyguanosine: base pairing, mismatch discrimination and nucleobase anion fluorescence sensing in single-stranded and duplex DNA. | Q43292707 | ||
| Catalytic roles for proton transfer and protonation in ribozymes | Q43722704 | ||
| Model substrates for an RNA enzyme | Q45167887 | ||
| A rate-limiting conformational step in the catalytic pathway of the glmS ribozyme. | Q45902451 | ||
| 8-Azaguanine reporter of purine ionization states in structured RNAs | Q46411889 | ||
| Ligand requirements for glmS ribozyme self-cleavage | Q46812332 | ||
| Ribokinase from Escherichia coli K12. Nucleotide sequence and overexpression of the rbsK gene and purification of ribokinase | Q47598146 | ||
| Fluorescence emission properties of 8-azapurines and their nucleosides, and application to the kinetics of the reverse synthetic reaction of purine nucleoside phosphorylase. | Q50539406 | ||
| Evidence for the role of solvated metal hydroxide in the hammerhead cleavage mechanism | Q72609634 | ||
| Integration of PCR fragments at any specific site within cloning vectors without the use of restriction enzymes and DNA ligase | Q74238681 | ||
| Two-stage polymerase chain reaction protocol allowing introduction of multiple mutations, deletions, and insertions, using QuikChange site-directed mutagenesis | Q77426888 | ||
| P4510 | describes a project that uses | ImageQuant | Q112270642 |
| P433 | issue | 45 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | ribozyme | Q205858 |
| P304 | page(s) | 18388-18396 | |
| P577 | publication date | 2011-10-20 | |
| P1433 | published in | Journal of the American Chemical Society | Q898902 |
| P1476 | title | An active-site guanine participates in glmS ribozyme catalysis in its protonated state | |
| P478 | volume | 133 |
| Q38240046 | 8-Azapurines as isosteric purine fluorescent probes for nucleic acid and enzymatic research. |
| Q27680143 | An in vitro evolved glmS ribozyme has the wild-type fold but loses coenzyme dependence |
| Q41675293 | Assessing the Potential Effects of Active Site Mg2+ Ions in the glmS Ribozyme-Cofactor Complex |
| Q41095160 | Chemical feasibility of the general acid/base mechanism of glmS ribozyme self-cleavage |
| Q38296308 | Direct observation of multiple tautomers of oxythiamine and their recognition by the thiamine pyrophosphate riboswitch |
| Q38238136 | Excited-state proton transfer and phototautomerism in nucleobase and nucleoside analogs: a mini-review |
| Q39093016 | Experimental approaches for measuring pKa's in RNA and DNA. |
| Q42193020 | Identification of the catalytic Mg²⁺ ion in the hepatitis delta virus ribozyme |
| Q36684866 | Lewis acid catalysis of phosphoryl transfer from a copper(II)-NTP complex in a kinase ribozyme |
| Q35197136 | Linear free energy relationships in RNA transesterification: theoretical models to aid experimental interpretations |
| Q36540017 | Multiscale methods for computational RNA enzymology. |
| Q38204496 | Nucleic acid catalysis: metals, nucleobases, and other cofactors |
| Q34756866 | Phosphatase-inert glucosamine 6-phosphate mimics serve as actuators of the glmS riboswitch |
| Q56763268 | Phosphonylated 8-Azahypoxantines as Acyclic Nucleotide Analogs |
| Q38896499 | Probing fast ribozyme reactions under biological conditions with rapid quench-flow kinetics |
| Q36997163 | Ribozyme Catalysis with a Twist: Active State of the Twister Ribozyme in Solution Predicted from Molecular Simulation |
| Q34761573 | Role of tautomerism in RNA biochemistry |
| Q35020704 | Role of the active site guanine in the glmS ribozyme self-cleavage mechanism: quantum mechanical/molecular mechanical free energy simulations |
| Q86600031 | Synthesis of 2'-O-photocaged ribonucleoside phosphoramidites |
| Q51139880 | The GlcN6P cofactor plays multiple catalytic roles in the glmS ribozyme. |
| Q28278331 | The glmS ribozyme cofactor is a general acid-base catalyst |
| Q36697198 | Towards Accurate Prediction of Protonation Equilibrium of Nucleic Acids |
| Q36697118 | pH-dependent dynamics of complex RNA macromolecules |
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