Toward the development of microbial indicators for wetland assessment.

scientific article

Toward the development of microbial indicators for wetland assessment. is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

External links are
P356DOI10.1016/J.WATRES.2013.01.023
P698PubMed publication ID23384515

P50authorShashikanth GajarajQ43320050
P2093author name stringYanyan Zhang
Zhiqiang Hu
Atreyee Sims
Pamela B Brown
P2860cites workLateral gene transfer and the nature of bacterial innovationQ22122396
Marine algal toxins: origins, health effects, and their increased occurrenceQ24671426
Microbial diversity in the deep sea and the underexplored "rare biosphere"Q24685531
Rationale for a new generation of indicators for coastal watersQ24814945
Isolation of an autotrophic ammonia-oxidizing marine archaeonQ28273549
Analysis of bacterial and archaeal diversity in coastal microbial mats using massive parallel 16S rRNA gene tag sequencingQ28743732
Quantitative Phylogenetic Assessment of Microbial Communities in Diverse EnvironmentsQ30002324
Microbial diversity and function in soil: from genes to ecosystemsQ31073757
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cyclingQ33227862
Single-stranded conformational polymorphism for separation of mixed rRNAS (rRNA-SSCP): a new method for profiling microbial communitiesQ33233204
Comparison of bacterial communities in New England Sphagnum bogs using terminal restriction fragment length polymorphism (T-RFLP).Q33244868
Phylogenetic diversity and activity of aerobic heterotrophic bacteria from a hypersaline oil-polluted microbial mat.Q33261108
Micro-colony array based high throughput platform for enzyme library screeningQ33266859
Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function.Q33291043
Molecular analysis of enrichment cultures of ammonia oxidizers from the Salar de Huasco, a high altitude saline wetland in northern ChileQ33321581
Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptomeQ33346229
Microbial community structure and denitrification in a wetland mitigation bankQ33452518
Microbial community structure in the North Pacific oceanQ33485828
Achievements and new knowledge unraveled by metagenomic approachesQ33504227
Distribution and diversity of archaeal and bacterial ammonia oxidizers in salt marsh sedimentsQ33508392
GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activityQ33567621
Abundance of ammonia-oxidizing archaea and bacteria along an estuarine salinity gradient in relation to potential nitrification rates.Q33649041
Characterization ofProchlorococcusclades from iron-depleted oceanic regionsQ33669961
Relationship between bacterial diversity and function under biotic control: the soil pesticide degraders as a case studyQ33772509
Ammonium availability affects the ratio of ammonia-oxidizing bacteria to ammonia-oxidizing archaea in simulated creek ecosystemsQ33794736
Quantitative analyses of ammonia-oxidizing Archaea and bacteria in the sediments of four nitrogen-rich wetlands in ChinaQ33799352
Environmental conditions influence the plant functional diversity effect on potential denitrificationQ33818211
Does biodiversity of macroinvertebrates and genome response of Chironomidae larvae (Diptera) reflect heavy metal pollution in a small pond?Q33846085
Novel approach to quantitative detection of specific rRNA in a microbial community, using catalytic DNA.Q33913341
Ammonia-oxidizing bacteria dominates over ammonia-oxidizing archaea in a saline nitrification reactor under low DO and high nitrogen loadingQ33913759
Illumina-based analysis of microbial community diversityQ33934016
Metagenomic insights into the evolution, function, and complexity of the planktonic microbial community of Lake Lanier, a temperate freshwater ecosystemQ33963361
Changes in diversity and functional gene abundances of microbial communities involved in nitrogen fixation, nitrification, and denitrification in a tidal wetland versus paddy soils cultivated for different time periodsQ33963367
rRNA operon copy number reflects ecological strategies of bacteriaQ33986862
Diversity of nitrite reductase (nirK and nirS) gene fragments in forested upland and wetland soilsQ34051926
Archaea rather than bacteria control nitrification in two agricultural acidic soilsQ34147291
Biological Indicator Systems in Floodplains – a ReviewQ59269699
Effect of salinity on temporal and spatial dynamics of ammonia-oxidising bacteria from intertidal freshwater sedimentQ60169817
SEA-LEVEL RISE AND COASTAL FOREST RETREAT ON THE WEST COAST OF FLORIDA, USAQ60229199
Sediment microbial activities and physic-chemistry as progress indicators of salt marsh restoration processesQ60445276
Changes in microbial community structure and function following Sphagnum peatland restorationQ60469440
A benthic macroinvertebrate size spectra index for implementing the Water Framework Directive in coastal lagoons in Mediterranean and Black Sea ecoregionsQ60528267
Emission of N2O, N2, CH4, and CO2 from constructed wetlands for wastewater treatment and from riparian buffer zonesQ60645181
New DGGE strategies for the analyses of methanotrophic microbial communities using different combinations of existing 16S rRNA-based primersQ62084953
Temporal and spatial distributions of ammonia-oxidizing archaea and bacteria and their ratio as an indicator of oligotrophic conditions in natural wetlandsQ84310021
Generalized Linear ModelsQ105583240
Seasonal variation in the function and diversity of methanotrophs in the littoral wetland of a boreal eutrophic lakeQ34148025
Tapping into microbial diversity.Q34308289
Resolving functional diversity in relation to microbial community structure in soil: exploiting genomics and stable isotope probingQ35165311
Niche specialization of terrestrial archaeal ammonia oxidizersQ35641357
Distinct growth strategies of soil bacteria as revealed by large-scale colony trackingQ35804831
Structure and function of methanogens along a short-term restoration chronosequence in the Florida EvergladesQ35913224
Linking microbial community structure with function: fluorescence in situ hybridization-microautoradiography and isotope arraysQ36353132
Existing and emerging detection technologies for DNA (Deoxyribonucleic Acid) finger printing, sequencing, bio- and analytical chips: a multidisciplinary development unifying molecular biology, chemical and electronics engineeringQ36678097
Environmental and anthropogenic controls over bacterial communities in wetland soilsQ36976697
Witnessing the last supper of uncultivated microbial cells with Raman-FISH.Q37017102
Microbial diversity and the genetic nature of microbial speciesQ37156439
Ammonia-oxidizing archaea involved in nitrogen removalQ37397917
Environmental factors shaping the ecological niches of ammonia-oxidizing archaeaQ37488407
Environmental proteomics: analysis of structure and function of microbial communities.Q37642649
Detecting metabolic activities in single cells, with emphasis on nanoSIMS.Q37957210
Functional genomic signatures of sponge bacteria reveal unique and shared features of symbiosisQ39283190
Stable isotope probing analysis of interactions between ammonia oxidizersQ39890556
Physical integrity: the missing link in biological monitoring and TMDLsQ40010398
Disconnect of microbial structure and function: enzyme activities and bacterial communities in nascent stream corridors.Q41145036
Temporal and spatial development of surface soil conditions at two created riverine marshesQ42022074
Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosmsQ42790576
Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and BacteriaQ43027659
Effects of substratum on the diversity and stability of ammonia-oxidizing communities in a constructed wetland used for wastewater treatment.Q43353830
Role of sulfur-reducing bacteria in a wetland system treating acid mine drainageQ43358642
Molecular characterisation of bacteria in a wetland used to remove ammoniacal-N from landfill leachate.Q43360470
Analysis of the microbial functional diversity within water-stressed soil communities by flow cytometric analysis and CTC+ cell sortingQ44462878
Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuaryQ46226732
Fluorescence in situ hybridisation coupled to ultra small immunogold detection to identify prokaryotic cells using transmission and scanning electron microscopyQ46489835
Comparison of the community structures of ammonia-oxidizing bacteria and archaea in rhizoplanes of floating aquatic macrophytesQ48060558
A COMPOSITE RATING OF ALGAE TOLERATING ORGANIC POLLUTION(2).Q48579932
A prototype taxonomic microarray targeting the rpsA housekeeping gene permits species identification within the rhizobial genus EnsiferQ49061506
Ammonia oxidation: different niches for bacteria and archaea?Q51625713
Evidence for complete denitrification in a benthic foraminifer.Q51721507
Biogeochemistry of metalliferous peats: sulfur speciation and depth distributions of dsrAB genes and Cd, Fe, Mn, S, and Zn in soil cores.Q53563162
In search of biological indicators for soil health and disease suppressionQ56069224
Assessment of Biotic Integrity Using Fish CommunitiesQ56225024
The effects of adjacent land use on wetland species richness and community compositionQ56341042
WETLAND RESOURCES: Status, Trends, Ecosystem Services, and RestorabilityQ56699196
Diatom-based Weighted-averaging Transfer Functions for Great Lakes Coastal Water Quality: Relationships to Watershed CharacteristicsQ56985237
Ammonium supply rate influences archaeal and bacterial ammonia oxidizers in a wetland soil vertical profileQ57013887
Bacterial community responses to increasing ammonia concentrations in model recirculating vertical flow saline biofiltersQ57279090
AQUAFLORA: A predictive model based on diatoms and macrophytes for streams water quality assessmentQ57872835
P433issue5
P407language of work or nameEnglishQ1860
P1104number of pages15
P304page(s)1711-1725
P577publication date2013-01-23
P1433published inWater ResearchQ15708879
P1476titleToward the development of microbial indicators for wetland assessment
P478volume47

Reverse relations

cites work (P2860)
Q28598171Accumulation of microcystins in a dominant Chironomid Larvae (Tanypus chinensis) of a large, shallow and eutrophic Chinese lake, Lake Taihu
Q35626353Bacterial community responses to a gradient of alkaline mountaintop mine drainage in Central Appalachian streams
Q33743376Bacterial targets as potential indicators of diesel fuel toxicity in subantarctic soils
Q35658992Caspian Rapid Assessment Method: a localized procedure for assessment of wetlands at southern fringe of the Caspian Sea.
Q90723288Changes of Bacterial Communities in Response to Prolonged Hydrodynamic Disturbances in the Eutrophic Water-Sediment Systems
Q60935252Comparison of the Abundance and Community Structure of N-Cycling Bacteria in Paddy Rhizosphere Soil under Different Rice Cultivation Patterns
Q57536404Effects of Misgurnus anguillicaudatus and Cipangopaludina cathayensis on Pollutant Removal and Microbial Community in Constructed Wetlands
Q57456924Fine-scale spatial homogenization of microbial habitats: a multivariate index of headwater wetland complex condition
Q38831156Hydroponic root mats for wastewater treatment-a review.
Q39149670Identifying the microbial taxa that consistently respond to soil warming across time and space.
Q46945875Linking community tolerance and structure with low metallic contamination: a field study on 13 biofilms sampled across the Seine river basin.
Q35229233Metagenomic analysis reveals microbial diversity and function in the rhizosphere soil of a constructed wetland
Q35846554Microbial assemblages for environmental quality assessment: Knowledge, gaps and usefulness in the European Marine Strategy Framework Directive
Q46567554Microbial communities in riparian soils of a settling pond for mine drainage treatment
Q64107112Microbial community structure and microbial networks correspond to nutrient gradients within coastal wetlands of the Laurentian Great Lakes
Q47158591Myriophyllum aquaticum Constructed Wetland Effectively Removes Nitrogen in Swine Wastewater
Q39342327Rapid Reactivation of Deep Subsurface Microbes in the Presence of C-1 Compounds
Q38639862Salt marsh bacterial communities before and after the Deepwater Horizon oil spill
Q46256611Stratified Bacterial and Archaeal Community in Mangrove and Intertidal Wetland Mudflats Revealed by High Throughput 16S rRNA Gene Sequencing.

Search more.