Microbial diversity and function in soil: from genes to ecosystems

scientific article

Microbial diversity and function in soil: from genes to ecosystems is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1016/S1369-5274(02)00324-7
P698PubMed publication ID12057676

P50authorLise ØvreåsQ87738056
P2093author name stringVigdis Torsvik
P2860cites workNumerical analysis of grassland bacterial community structure under different land management regimens by using 16S ribosomal DNA sequence data and denaturing gradient gel electrophoresis banding patternsQ30661266
Nitrification in sequencing biofilm batch reactors: lessons from molecular approaches.Q30671370
The Diversity of Archaea and Bacteria in Association with the Roots of Zea mays L.Q30674593
In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plantsQ30756686
Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganismsQ33180451
Stable-isotope probing as a tool in microbial ecologyQ33891203
Bacterial functional redundancy along a soil reclamation gradientQ33987805
Use of combined microautoradiography and fluorescence in situ hybridization to determine carbon metabolism in mixed natural communities of uncultured bacteria from the genus Achromatium.Q33987882
Novel bacterial lineages at the (sub)division level as detected by signature nucleotide-targeted recovery of 16S rRNA genes from bulk soil and rice roots of flooded rice microcosmsQ33988811
Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methodsQ33989506
Microbial population structures in soil particle size fractions of a long-term fertilizer field experimentQ33990294
Gene cassette PCR: sequence-independent recovery of entire genes from environmental DNA.Q33990713
Development and evaluation of functional gene arrays for detection of selected genes in the environmentQ33990933
Structural diversity of microorganisms in chemically perturbed soil assessed by molecular and cytochemical approachesQ34105433
The species concept for prokaryotesQ34127826
Cultivation-independent techniques for studying methanotroph ecologyQ34147003
Linking genetic identity and function in communities of uncultured bacteria.Q34385793
Quantitative and qualitative microscale distribution of bacteria in soilQ34423623
Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA microarraysQ39492131
Microbial diversity, producer-decomposer interactions and ecosystem processes: a theoretical model.Q55646295
Linking microbial community composition to function in a tropical soilQ58078953
Detection and classification of atmospheric methane oxidizing bacteria in soilQ73814380
Novel techniques for analysing microbial diversity in natural and perturbed environmentsQ77584104
P433issue3
P921main subjectecosystemQ37813
biodiversityQ47041
microbial diversityQ124150969
P6104maintained by WikiProjectWikiProject EcologyQ10818384
P304page(s)240-245
P577publication date2002-06-01
P1433published inCurrent Opinion in MicrobiologyQ15752444
P1476titleMicrobial diversity and function in soil: from genes to ecosystems
P478volume5

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Q33809794Responses of the bacterial community to chronic gamma radiation in a rice paddy ecosystem
Q37030826Responsiveness of soil nitrogen fractions and bacterial communities to afforestation in the Loess Hilly Region (LHR) of China
Q34798550Rhizosphere bacterial communities associated with long-lived perennial prairie plants vary in diversity, composition, and structure.
Q36007269Rhizosphere bacterial signalling: a love parade beneath our feet
Q35216670Salt marsh sediment characteristics as key regulators on the efficiency of hydrocarbons bioremediation by Juncus maritimus rhizospheric bacterial community.
Q47435569Sampling strategy in molecular microbial ecology: influence of soil sample size on DNA fingerprinting analysis of fungal and bacterial communities
Q47158809Scientific Opinion addressing the state of the science on risk assessment of plant protection products for in‐soil organisms
Q35630882Screening, identification, and characterization of a GH43 family β-xylosidase/α-arabinofuranosidase from a compost microbial metagenome.
Q36111961Screening, identification, and characterization of a novel saccharide-stimulated β-glycosidase from a soil metagenomic library.
Q93188952Seasonal dynamics of microbial diversity in the rhizosphere of Ulmus pumila L. var. sabulosa in a steppe desert area of Northern China
Q34038130Seasonal effects in a lake sediment archaeal community of the Brazilian Savanna
Q30811039Self-Driven Jamming in Growing Microbial Populations
Q41879796Short-term response of soil bacteria to carbon enrichment in different soil microsites
Q33746437Size does matter: Application-driven approaches for soil metagenomics
Q64238024Soil Bacterial Communities From the Chilean Andean Highlands: Taxonomic Composition and Culturability
Q57170673Soil Properties Drive Microbial Community Structure in a Large Scale Transect in South Eastern Australia
Q34340932Soil bacterial community composition and diversity respond to cultivation in Karst ecosystems
Q34374561Soil bacterial diversity screening using single 16S rRNA gene V regions coupled with multi-million read generating sequencing technologies
Q28756010Soil health in agricultural systems
Q33949385Soil microbial community successional patterns during forest ecosystem restoration.
Q58991258Soil microbial diversity affects soil organic matter decomposition in a silty grassland soil
Q42006391Soil nitrate reducing processes - drivers, mechanisms for spatial variation, and significance for nitrous oxide production
Q46608929Soil water content and organic carbon availability are major determinants of soil microbial community composition
Q51413123Soil-borne microbial functional structure across different land uses.
Q43264942Spatial Heterogeneity of SOM Concentrations Associated with White-rot Versus Brown-rot Wood Decay
Q51697102Spatial and temporal changes in microbial community structure associated with recharge-influenced chemical gradients in a contaminated aquifer.
Q81371270Spatial variation in Streptomyces genetic composition and diversity in a prairie soil
Q34567837Speedy speciation in a bacterial microcosm: new species can arise as frequently as adaptations within a species
Q26827562Stable isotope probing in the metagenomics era: a bridge towards improved bioremediation
Q48099780Structural diversity of bacterial communities in a heavy metal mineralized granite outcrop
Q27320756Structure and evolution of Streptomyces interaction networks in soil and in silico
Q27642251Structure and mechanism of a bacterial haloalcohol dehalogenase: a new variation of the short-chain dehydrogenase/reductase fold without an NAD(P)H binding site
Q42019417Successive DNA extractions improve characterization of soil microbial communities
Q34340382Suppressive subtractive hybridization as a tool for identifying genetic diversity in an environmental metagenome: the rumen as a model
Q34009379Symbiotic effectiveness of rhizobial mutualists varies in interactions with native Australian legume genera
Q57279048Tag-encoded pyrosequencing analysis of bacterial diversity within different alpine grassland ecosystems of the Qinghai-Tibet Plateau, China
Q33972648Taxonomic and functional assignment of cloned sequences from high Andean forest soil metagenome
Q58848209Taxonomic and functional characterization of microbial communities in Technosols constructed for remediation of a contaminated industrial wasteland
Q64922940Technologies for the Selection, Culture and Metabolic Profiling of Unique Rhizosphere Microorganisms for Natural Product Discovery.
Q37111227Temporal Shifts in Microbial Communities in Nonpregnant African-American Women with and without Bacterial Vaginosis
Q41670396Temporal dynamics in microbial soil communities at anthrax carcass sites
Q38728792The 'known' genetic potential for microbial communities to degrade organic phosphorus is reduced in low-pH soils.
Q90461781The Structure and Diversity of Nitrogen Functional Groups from Different Cropping Systems in Yellow River Delta
Q37564500The composition and stability of the vaginal microbiota of normal pregnant women is different from that of non-pregnant women
Q36165551The effect of heavy metal contamination on the bacterial community structure at Jiaozhou Bay, China
Q84766272The effect of tetrahydrofuran on the enzymatic activity and microbial community in activated sludge from a sequencing batch reactor
Q98290564The effects of humic substances on DNA isolation from soils
Q34108191The great screen anomaly--a new frontier in product discovery through functional metagenomics
Q35621864The influence of surface soil physicochemistry on the edaphic bacterial communities in contrasting terrain types of the Central Namib Desert.
Q33253367The influence of tropical plant diversity and composition on soil microbial communities
Q33959392The large-scale organization of the bacterial network of ecological co-occurrence interactions.
Q33216317The metagenomics of soil
Q36353210The microbially mediated soil organic carbon loss under degenerative succession in an alpine meadow
Q50674757The modulating role of dissolved organic matter on spatial patterns of microbial metabolism in Lake Erie sediments.
Q36322025The preservation of microbial DNA in archived soils of various genetic types
Q36335897The rhizospheric microbial community structure and diversity of deciduous and evergreen forests in Taihu Lake area, China.
Q56895324Thermal characteristics and bacterial diversity of forest soil in the Haean basin of Korea
Q34577730Toward the development of microbial indicators for wetland assessment.
Q33789089Towards the co-ordination of terrestrial ecosystem protocols across European research infrastructures
Q41969266Transcriptional and antagonistic responses of Pseudomonas fluorescens Pf0-1 to phylogenetically different bacterial competitors
Q31154120Trends in Taxonomic and Functional Composition of Soil Microbiome Along a Precipitation Gradient in Israel
Q27313536Turing Patterning Using Gene Circuits with Gas-Induced Degradation of Quorum Sensing Molecules
Q57230920Understanding and managing soil biodiversity: a major challenge in agroecology
Q36217256Urban-development-induced Changes in the Diversity and Composition of the Soil Bacterial Community in Beijing
Q33281999Use of 16S rRNA gene based clone libraries to assess microbial communities potentially involved in anaerobic methane oxidation in a Mediterranean cold seep
Q37421924Using community analysis to explore bacterial indicators for disease suppression of tobacco bacterial wilt
Q34285005Vaginal microbiome: rethinking health and disease
Q28476926Validation and application of a PCR primer set to quantify fungal communities in the soil environment by real-time quantitative PCR.
Q33255613Variation in dissolved organic matter controls bacterial production and community composition
Q36901562Visualization, modelling and prediction in soil microbiology
Q57879488Volatile Organic Metabolites as Indicators of Soil Microbial Activity and Community Composition Shifts
Q28831502Wheat and Rice Growth Stages and Fertilization Regimes Alter Soil Bacterial Community Structure, But Not Diversity
Q38490450mVOC: a database of microbial volatiles
Q45067462nirS-type denitrifying bacterial assemblages respond to environmental conditions of a shallow estuary

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