| scholarly article | Q13442814 |
| P50 | author | Tomas Macek | Q54852007 |
| Ondrej Uhlik | Q56635677 | ||
| Mary-Cathrine Leewis | Q59834876 | ||
| Mary Beth Leigh | Q89418684 | ||
| Michal Strejček | Q115247738 | ||
| P2093 | author name string | Martina Mackova | |
| Lucie Musilova | |||
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| The future of single-cell environmental microbiology | Q40251286 | ||
| Measuring unbiased metatranscriptomics in suboxic waters of the central Baltic Sea using a new in situ fixation system | Q40477850 | ||
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| Linking microbial community function to phylogeny of sulfate-reducing Deltaproteobacteria in marine sediments by combining stable isotope probing with magnetic-bead capture hybridization of 16S rRNA. | Q42097443 | ||
| Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics | Q36657499 | ||
| Linking microbial phylogeny to metabolic activity at the single-cell level by using enhanced element labeling-catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS | Q36672692 | ||
| Metagenomics, biotechnology with non-culturable microbes | Q36775351 | ||
| In situ bioremediation | Q36797648 | ||
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| Family shuffling of soil DNA to change the regiospecificity of Burkholderia xenovorans LB400 biphenyl dioxygenase | Q33265319 | ||
| Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function. | Q33291043 | ||
| Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics | Q33320873 | ||
| Field-based and laboratory stable isotope probing surveys of the identities of both aerobic and anaerobic benzene-metabolizing microorganisms in freshwater sediment | Q33330097 | ||
| Species divergence and the measurement of microbial diversity | Q33330731 | ||
| Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands. | Q33352295 | ||
| Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP). | Q33363399 | ||
| Metagenomics approaches in systems microbiology | Q33389336 | ||
| Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis | Q33479985 | ||
| DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment | Q33489375 | ||
| Accurate determination of microbial diversity from 454 pyrosequencing data | Q33492259 | ||
| Achievements and new knowledge unraveled by metagenomic approaches | Q33504227 | ||
| When metagenomics meets stable-isotope probing: progress and perspectives | Q33536929 | ||
| Ironing out the wrinkles in the rare biosphere through improved OTU clustering | Q33541671 | ||
| GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity | Q33567621 | ||
| Elucidating MTBE degradation in a mixed consortium using a multidisciplinary approach | Q33584027 | ||
| DNA Stable-Isotope Probing (DNA-SIP) | Q33668583 | ||
| Metagenomic analyses: past and future trends | Q33775254 | ||
| Microbial metatranscriptomics in a permanent marine oxygen minimum zone. | Q33787220 | ||
| Quantitative tracking of isotope flows in proteomes of microbial communities | Q33810145 | ||
| Stable-isotope probing as a tool in microbial ecology | Q33891203 | ||
| Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton | Q33946333 | ||
| Diversity of 16S rRNA genes within individual prokaryotic genomes. | Q33946493 | ||
| PCR amplification-independent methods for detection of microbial communities by the high-density microarray PhyloChip | Q33963322 | ||
| Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume | Q33981180 | ||
| Soluble methane monooxygenase gene clusters from trichloroethylene-degrading Methylomonas sp. strains and detection of methanotrophs during in situ bioremediation | Q33986100 | ||
| Progress in prokaryotic transcriptomics | Q33992374 | ||
| Bacterial community transcription patterns during a marine phytoplankton bloom | Q34045367 | ||
| Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products | Q34067905 | ||
| Metals, minerals and microbes: geomicrobiology and bioremediation. | Q34088795 | ||
| Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies | Q34109852 | ||
| Deep-sea oil plume enriches indigenous oil-degrading bacteria | Q34132984 | ||
| Towards a global historical emission inventory for selected PCB congeners--a mass balance approach. 1. Global production and consumption. | Q34135312 | ||
| Comparison of rRNA and polar-lipid-derived fatty acid biomarkers for assessment of 13C-substrate incorporation by microorganisms in marine sediments. | Q42142631 | ||
| 13C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing. | Q42975460 | ||
| DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment | Q43081264 | ||
| Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques | Q43232908 | ||
| Time resolved protein-based stable isotope probing (Protein-SIP) analysis allows quantification of induced proteins in substrate shift experiments | Q43834873 | ||
| Root turnover: an important source of microbial substrates in rhizosphere remediation of recalcitrant contaminants | Q43985218 | ||
| Isolation of small-subunit rRNA for stable isotopic characterization. | Q44086617 | ||
| Combination of microautoradiography and fluorescence in situ hybridization for identification of microorganisms degrading xenobiotic contaminants | Q44720267 | ||
| Bacteria and phytoremediation: new uses for endophytic bacteria in plants | Q45209843 | ||
| Plant exudates promote PCB degradation by a rhodococcal rhizobacteria. | Q45327952 | ||
| Electron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil-contaminated aquifer by Pyro-SIP. | Q45751169 | ||
| Identification of hexahydro-1,3,5-trinitro-1,3,5-triazine-degrading microorganisms via 15N-stable isotope probing. | Q46006038 | ||
| Stable isotope switching (SIS): a new stable isotope probing (SIP) approach to determine carbon flow in the soil food web and dynamics in organic matter pools. | Q46176003 | ||
| Biostimulation of PAH degradation with plants containing high concentrations of linoleic acid | Q46393538 | ||
| Hydroxy-PCBs, methoxy-PCBs and hydroxy-methoxy-PCBs: metabolites of polychlorinated biphenyls formed in vitro by tobacco cells. | Q46406177 | ||
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| Cloning the bacterial bphC gene into Nicotiana tabacum to improve the efficiency of PCB phytoremediation | Q46443560 | ||
| Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures | Q46532906 | ||
| In situ bioremediation of a cis-dichloroethylene-contaminated aquifer utilizing methane-rich groundwater from an uncontaminated aquifer | Q46546364 | ||
| Analysis of genes involved in methyl halide degradation in Aminobacter lissarensis CC495. | Q46652450 | ||
| Cultivation-independent in situ molecular analysis of bacteria involved in degradation of pentachlorophenol in soil | Q46653975 | ||
| Method for measuring substrate preferences by individual members of microbial consortia proposed for bioaugmentation | Q46850293 | ||
| Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs). | Q46878662 | ||
| Comparison of methods for simultaneous identification of bacterial species and determination of metabolic activity by protein-based stable isotope probing (Protein-SIP) experiments | Q47779724 | ||
| Endophytes and their potential to deal with co-contamination of organic contaminants (toluene) and toxic metals (nickel) during phytoremediation | Q48261995 | ||
| Identification of active methylotroph populations in an acidic forest soil by stable-isotope probing | Q48287891 | ||
| Bioremediation of trichloroethylene and cis-1,2-dichloroethylene-contaminated groundwater by methane-utilizing bacteria. | Q51444736 | ||
| High-resolution metagenomics targets specific functional types in complex microbial communities. | Q51680917 | ||
| DNA stable-isotope probing. | Q51710181 | ||
| Assimilation of benzene carbon through multiple trophic levels traced by different stable isotope probing methodologies. | Q52719309 | ||
| Enhancement of gene detection frequencies by combining DNA-based stable-isotope probing with the construction of metagenomic DNA libraries | Q58020040 | ||
| DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment | Q58815917 | ||
| Direct linking of microbial populations to specific biogeochemical processes by 13C-labelling of biomarkers | Q59098669 | ||
| Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis | Q59820853 | ||
| The role of root exudates and allelochemicals in the rhizosphere | Q60430571 | ||
| Microbial reductive dehalogenation of polychlorinated biphenyls | Q73708782 | ||
| Novel approach using substrate-mediated radiolabelling of RNA to link metabolic function with the structure of microbial communities | Q80523376 | ||
| Phytoremediation of organic and nutrient contaminants | Q84298056 | ||
| Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions | Q34156500 | ||
| Cleaning up with genomics: applying molecular biology to bioremediation | Q34308270 | ||
| Identification of bacteria utilizing biphenyl, benzoate, and naphthalene in long-term contaminated soil | Q34342232 | ||
| Anaerobic microbial dehalogenation | Q34359365 | ||
| Polychlorinated biphenyl (PCB)-degrading bacteria associated with trees in a PCB-contaminated site | Q34570615 | ||
| Respiration of 13C-labeled substrates added to soil in the field and subsequent 16S rRNA gene analysis of 13C-labeled soil DNA. | Q34766791 | ||
| Metatranscriptomic signature of exogenous polyamine utilization by coastal bacterioplankton | Q34769147 | ||
| Identification of bacterial micropredators distinctively active in a soil microbial food web. | Q34973884 | ||
| Novel biphenyl-oxidizing bacteria and dioxygenase genes from a korean tidal mudflat | Q35080656 | ||
| Validation of heavy-water stable isotope probing for the characterization of rapidly responding soil bacteria | Q35080945 | ||
| Secondary plant metabolites in phytoremediation and biotransformation | Q35082182 | ||
| Identification of nitrogen-incorporating bacteria in petroleum-contaminated arctic soils by using [15N]DNA-based stable isotope probing and pyrosequencing | Q35091979 | ||
| Resolving functional diversity in relation to microbial community structure in soil: exploiting genomics and stable isotope probing | Q35165311 | ||
| Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes | Q35165315 | ||
| Stable-isotope probing of nucleic acids: a window to the function of uncultured microorganisms | Q35172620 | ||
| Identification of a toluene-degrading bacterium from a soil sample through H(2)(18)O DNA stable isotope probing | Q35191744 | ||
| Identification and modification of biphenyl dioxygenase sequences that determine the specificity of polychlorinated biphenyl degradation | Q35203805 | ||
| Biodegradation of nitro-substituted explosives 2,4,6-trinitrotoluene, hexahydro-1,3,5-trinitro-1,3,5-triazine, and octahydro-1,3,5,7-tetranitro-1,3,5-tetrazocine by a phytosymbiotic Methylobacterium sp. associated with poplar tissues (Populus deltoi | Q35540158 | ||
| Exploitation of plants for the removal of organics in environmental remediation | Q35555208 | ||
| Rhizoremediation: a beneficial plant-microbe interaction | Q35625139 | ||
| Isolation and characterization of an N-methylcarbamate insecticide-degrading methylotrophic bacterium. | Q35682851 | ||
| Natural attenuation of contaminated soils | Q35697079 | ||
| Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability | Q35750876 | ||
| Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1. | Q35759397 | ||
| The tritrophic trinity: a source of pollutant-degrading enzymes and its implications for phytoremediation | Q35804667 | ||
| Stable isotope probing with 15N achieved by disentangling the effects of genome G+C content and isotope enrichment on DNA density | Q35869725 | ||
| Stable isotope probing with 15N2 reveals novel noncultivated diazotrophs in soil | Q35869730 | ||
| Bacterial degradation of aromatic pollutants: a paradigm of metabolic versatility | Q35922212 | ||
| Trichloroethylene biodegradation by a methane-oxidizing bacterium | Q36069823 | ||
| Stable isotope probing - linking microbial identity to function | Q36123641 | ||
| Linking microbial community structure with function: fluorescence in situ hybridization-microautoradiography and isotope arrays | Q36353132 | ||
| The use of stable isotope probing techniques in bioreactor and field studies on bioremediation | Q36354006 | ||
| Studying plant-microbe interactions using stable isotope technologies | Q36368744 | ||
| Simultaneous analysis of microbial identity and function using NanoSIMS. | Q36477484 | ||
| P433 | issue | 2 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | bioremediation | Q816441 |
| stable isotope | Q878130 | ||
| metagenomics | Q903778 | ||
| P304 | page(s) | 154-65 | |
| P577 | publication date | 2013-01-01 | |
| P1433 | published in | Biotechnology Advances | Q4915328 |
| P1476 | title | Stable isotope probing in the metagenomics era: a bridge towards improved bioremediation | |
| P478 | volume | 31 |
| Q35762301 | A review: what is the spermosphere and how can it be studied? |
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| Q40243374 | Hunting Down Frame Shifts: Ecological Analysis of Diverse Functional Gene Sequences |
| Q64092621 | Identification and Characterization of a Dominant Sulfolane-Degrading Rhodoferax sp. via Stable Isotope Probing Combined with Metagenomics |
| Q49718542 | Investigations of microbial degradation of polycyclic aromatic hydrocarbons based on 13C-labeled phenanthrene in a soil co-contaminated with trace elements using a plant assisted approach |
| Q92602737 | Metataxonomic analyses reveal differences in aquifer bacterial community as a function of creosote contamination and its potential for contaminant remediation |
| Q57842262 | Microbial communities biostimulated by ethanol during uranium (VI) bioremediation in contaminated sediment as shown by stable isotope probing |
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| Q36092961 | Phytoremediation: State-of-the-art and a key role for the plant microbiome in future trends and research prospects |
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