Predicting biological networks from genomic data

scientific article (publication date: 21 February 2008)

Predicting biological networks from genomic data is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1016/J.FEBSLET.2008.02.033
P698PubMed publication ID18294967
P5875ResearchGate publication ID5557200

P50authorPeer BorkQ7160367
Lars Juhl JensenQ26837548
Eoghan HarringtonQ88414238
P2860cites workTowards a proteome-scale map of the human protein–protein interaction networkQ21735930
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STRING 7--recent developments in the integration and prediction of protein interactionsQ24675384
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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiaeQ27860755
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Quantitative monitoring of gene expression patterns with a complementary DNA microarrayQ27861102
Proteome survey reveals modularity of the yeast cell machineryQ27929510
Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteinsQ27932356
Global mapping of the yeast genetic interaction networkQ27934987
Global landscape of protein complexes in the yeast Saccharomyces cerevisiaeQ27938796
A protein interaction map of Drosophila melanogasterQ28131783
Genetic regulatory mechanisms in the synthesis of proteinsQ28186173
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Quantitative assessment of protein function prediction from metagenomics shotgun sequencesQ30002368
Analysis of genomic context: prediction of functional associations from conserved bidirectionally transcribed gene pairsQ30002374
Systematic Discovery of In Vivo Phosphorylation NetworksQ30002403
Connected gene neighborhoods in prokaryotic genomesQ31051729
Microbial diversity and function in soil: from genes to ecosystemsQ31073757
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Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction mapsQ33307182
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Regulation of adjacent yeast genesQ33846538
Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouthQ34005081
Gene context conservation of a higher order than operons.Q34069755
Sequencing genomes from single cells by polymerase cloningQ34531680
Genome evolution reveals biochemical networks and functional modulesQ34787866
The third dimension for protein interactions and complexes.Q35018019
Missing genes in metabolic pathways: a comparative genomics approachQ35114448
Computational approaches for the analysis of gene neighbourhoods in prokaryotic genomesQ35839566
Towards cellular systems in 4D.Q36134071
High-confidence prediction of global interactomes based on genome-wide coevolutionary networksQ36458869
Experimental approaches to identify genetic networksQ36589935
Current progress in network research: toward reference networks for key model organismsQ36922803
VisANT 3.0: new modules for pathway visualization, editing, prediction and constructionQ38440753
Comparing classical pathways and modern networks: towards the development of an edge ontologyQ38515977
The coevolution of gene family treesQ41150566
Co-evolution of proteins with their interaction partnersQ41742351
How complete are current yeast and human protein-interaction networks?Q41838577
Use of logic relationships to decipher protein network organizationQ43945901
Systematic discovery of analogous enzymes in thiamin biosynthesisQ44470521
Chromatin remodelling is a major source of coexpression of linked genes in yeastQ45870812
The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationshipsQ48482970
Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome.Q51965081
Efficient attenuation of stochasticity in gene expression through post-transcriptional control.Q52561212
Similarity of phylogenetic trees as indicator of protein-protein interaction.Q55035526
Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathwaysQ55554520
The coordinated evolution of yeast proteins is constrained by functional modularityQ57829300
P433issue8
P407language of work or nameEnglishQ1860
P921main subjectcell biologyQ7141
biophysicsQ7100
structural biologyQ908902
P304page(s)1251-1258
P577publication date2008-02-21
P1433published inFEBS LettersQ1388051
P1476titlePredicting biological networks from genomic data
P478volume582

Reverse relations

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