Hoogsteen base pairs proximal and distal to echinomycin binding sites on DNA

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Hoogsteen base pairs proximal and distal to echinomycin binding sites on DNA is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode1987PNAS...84..910M
P356DOI10.1073/PNAS.84.4.910
P8608Fatcat IDrelease_c5iiiq37xzdlpkjmfbhnm7vajq
P932PMC publication ID304329
P698PubMed publication ID3103127
P5875ResearchGate publication ID20053412

P2093author name stringDervan PB
Mendel D
P2860cites workMolecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic AcidQ1895685
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Construction of a colicin E1-R factor composite plasmid in vitro: means for amplification of deoxyribonucleic acidQ33797267
Design of sequence-specific DNA-binding moleculesQ34038863
Complete Nucleotide Sequence of the Escherichia coli Plasmid pBR322Q34692751
A comparison of the structure of echinomycin and triostin A complexed to a DNA fragmentQ36139182
Molecular mechanical studies of d(CGTACG)2: complex of triostin A with the middle A - T base pairs in either Hoogsteen or Watson-Crick pairingQ37397055
Diethyl pyrocarbonate: a chemical probe for secondary structure in negatively supercoiled DNA.Q37556504
The chemical effects of nucleic acid alkylation and their relation to mutagenesis and carcinogenesisQ38111405
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FURTHER STUDIES ON THE ALKYLATION OF NUCLEIC ACIDS AND THEIR CONSTITUENT NUCLEOTIDESQ42057838
The binding of echinomycin to deoxyribonucleic acidQ42205589
Purification and Further Properties of Single-Strand-Specific Nuclease from Aspergillus oryzaeQ48009773
Echinomycin Binding Sites on DNAQ48387544
Chemical probes of DNA conformation: detection of Z-DNA at nucleotide resolution.Q54065890
Structure of DNase I at 2.0 Å resolution suggests a mechanism for binding to and cutting DNAQ59092559
Reaction of diethyl pyrocarbonate with nucleic acid components. Bases and nucleosides derived from guanine, cytosine, and uracilQ69497704
Non-Watson-Crick G.C and A.T base pairs in a DNA-antibiotic complexQ69500827
A structural basis for S1 nuclease sensitivity of double-stranded DNAQ70092312
Sequence preferences in the binding to DNA of triostin A and TANDEM as reported by DNase I footprintingQ70388518
Cleavage of DNA with methidiumpropyl-EDTA-iron(II): reaction conditions and product analysesQ70500973
Reaction of diethyl pyrocarbonate with nucleic acid components. AdenosineQ70597345
The molecular structure of a DNA-triostin A complexQ70601821
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P433issue4
P407language of work or nameEnglishQ1860
P304page(s)910-914
P577publication date1987-02-01
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleHoogsteen base pairs proximal and distal to echinomycin binding sites on DNA
P478volume84

Reverse relations

cites work (P2860)
Q34354855A historical account of Hoogsteen base-pairs in duplex DNA.
Q69353171A model for the ability of drugs to induce enhanced DNase I cleavage
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Q38692127Antitumour drug-DNA interactions: NMR studies of echinomycin and chromomycin complexes
Q38305966Binding of echinomycin to d(GCGC)2 and d(CCGG)2: distinct stacking interactions dictate the sequence-dependent formation of Hoogsteen base pairs
Q38301289Binding of quinomycin antibiotic UK-65,662 to DNA: 1H-n.m.r. studies of drug-induced changes in DNA conformation in complexes with d(ACGT)2 and d(GACGTC)2.
Q36724710Bisintercalator natural products with potential therapeutic applications: isolation, structure determination, synthetic and biological studies.
Q35229929Chemical reactivity of matched cytosine and thymine bases near mismatched and unmatched bases in a heteroduplex between DNA strands with multiple differences
Q42213716Detection of intercalation-induced changes in DNA structure by reaction with diethyl pyrocarbonate or potassium permanganate Evidence against the induction of Hoogsteen base pairing by echinomycin
Q40545659Diethyl pyrocarbonate can detect a modified DNA structure induced by the binding of quinoxaline antibiotics
Q40553354Diethylpyrocarbonate and permanganate provide evidence for an unusual DNA conformation induced by binding of the antitumour antibiotics bleomycin and phleomycin
Q40515848Echinomycin binding to the sequence CG(AT)nCG alters the structure of the central AT region
Q41540359Echinomycin, a bis-intercalating agent, induces C→T mutations via cytosine deamination
Q34324692Echinomycin-induced hypersensitivity to osmium tetroxide of DNA fragments incapable of forming Hoogsteen base pairs
Q36788407Events during eucaryotic rRNA transcription initiation and elongation: conversion from the closed to the open promoter complex requires nucleotide substrates
Q42794637Footprinting studies on the effect of echinomycin on the structure of a bent DNA fragment
Q58097051Hoogsteen versus Watson-Crick A-T basepairing in DNA complexes of a new group of ‘quinomycin-like’ antibiotics
Q40398777Infrared linear dichroism studies of DNA-drug complexes: quantitative determination of the drug-induced restriction of the B-A transition
Q37394044Initiation and regulation mechanisms of ribosomal RNA transcription in the eukaryote Acanthamoeba castellanii
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Q42274046Localized chemical reactivity in DNA associated with the sequence-specific bisintercalation of echinomycin
Q38301385NMR investigation of Hoogsteen base pairing in quinoxaline antibiotic--DNA complexes: comparison of 2:1 echinomycin, triostin A and [N-MeCys3,N-MeCys7] TANDEM complexes with DNA oligonucleotides
Q38328640Proton NMR study of the [d(ACGTATACGT)]2-2echinomycin complex: conformational changes between echinomycin binding sites
Q38337352Proton exchange kinetics in [d(ACGTATACGT)]2-echinomycin and [d(ACGTTAACGT)]2-echinomycin complexes
Q33360828Site-specific intercalation at the triplex-duplex junction induces a conformational change which is detectable by hypersensitivity to diethylpyrocarbonate
Q67685268The effects of actinomycin on the structure of dAn.dTn and (dA-dT)n regions surrounding its GC binding site. A footprinting study
Q37230414Tuning the DNA conformational perturbations induced by cytotoxic platinum-acridine bisintercalators: effect of metal cis/trans isomerism and DNA threading groups
Q33851888Unstable Hoogsteen base pairs adjacent to echinomycin binding sites within a DNA duplex

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