Computational cell biology: spatiotemporal simulation of cellular events

scientific article

Computational cell biology: spatiotemporal simulation of cellular events is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1146/ANNUREV.BIOPHYS.31.101101.140930
P698PubMed publication ID11988477
P5875ResearchGate publication ID11382663

P50authorLeslie M. LoewQ42563595
P2093author name stringJohn H Carson
James C Schaff
Boris M Slepchenko
P921main subjectcell biologyQ7141
P304page(s)423-441
P577publication date2001-10-25
P1433published inAnnual Review of Biophysics and Biomolecular StructureQ26853798
P1476titleComputational cell biology: spatiotemporal simulation of cellular events
P478volume31

Reverse relations

cites work (P2860)
Q93022827"Essentially, all models are wrong, but some are useful"-a cross-disciplinary agenda for building useful models in cell biology and biophysics
Q34480965A 3D Monte Carlo analysis of the role of dyadic space geometry in spark generation
Q39321257A Computational Model for Kinetic Studies of Cadherin Binding and Clustering
Q89539297A computational model for understanding the oligomerization mechanisms of TNF receptor superfamily
Q46047332A framework for modeling the relationship between cellular steady-state and stimulus-responsiveness
Q33863246A mitotic kinesin-6, Pav-KLP, mediates interdependent cortical reorganization and spindle dynamics in Drosophila embryos
Q34186954A signal transduction pathway model prototype I: From agonist to cellular endpoint
Q34186961A signal transduction pathway model prototype II: Application to Ca2+-calmodulin signaling and myosin light chain phosphorylation
Q35849189Assessment of cellular mechanisms contributing to cAMP compartmentalization in pulmonary microvascular endothelial cells.
Q36748597Attractive models: how to make the silicon cell relevant and dynamic
Q30489597Cell shape and negative links in regulatory motifs together control spatial information flow in signaling networks
Q34763799Closed-loop control of cellular functions using combinatory drugs guided by a stochastic search algorithm
Q36632073Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm
Q24814137Computational modeling reveals molecular details of epidermal growth factor binding
Q34997459Control, exploitation and tolerance of intracellular noise
Q42764168Developing models in virtual cell
Q34181394Discrete models of autocrine cell communication in epithelial layers
Q53185002Elucidating the general principles of cell adhesion with a coarse-grained simulation model.
Q35167516Functional genomics and proteomics: charting a multidimensional map of the yeast cell
Q36440378Hallucinogen actions on 5-HT receptors reveal distinct mechanisms of activation and signaling by G protein-coupled receptors
Q33414471Illoura: a software tool for analysis, visualization and semantic querying of cellular and other spatial biological data
Q36124322Intracellular signaling: spatial and temporal control
Q30938703Kinetic analysis of receptor-activated phosphoinositide turnover
Q51051374Local excitation, global inhibition mechanism for gradient sensing: an interactive applet.
Q35794519Membrane-binding/modification model of signaling protein activation and analysis of its control by cell morphology
Q30540366Modeling and simulation of biological systems from image data
Q37492381Models at the single cell level
Q38035856Multilevel complexity of calcium signaling: Modeling angiogenesis
Q36222097Numerical Approach to Spatial Deterministic-Stochastic Models Arising in Cell Biology
Q55129455Parameter uncertainty quantification using surrogate models applied to a spatial model of yeast mating polarization.
Q27329609Persistent cAMP-signals triggered by internalized G-protein-coupled receptors
Q35608390Probability-based model of protein-protein interactions on biological timescales
Q33353920Programming with models: modularity and abstraction provide powerful capabilities for systems biology
Q34257356Quantitative understanding of cell signaling: the importance of membrane organization.
Q26777344Regulation of Spatiotemporal Patterns by Biological Variability: General Principles and Applications to Dictyostelium discoideum
Q21145314Rise and demise of bioinformatics? Promise and progress
Q27304379Simulated single molecule microscopy with SMeagol
Q30476752Spatial analysis of 3' phosphoinositide signaling in living fibroblasts, III: influence of cell morphology and morphological Polarity.
Q34184412Spatial analysis of 3' phosphoinositide signaling in living fibroblasts: II. Parameter estimates for individual cells from experiments.
Q34266501Spatial modeling of cell signaling networks
Q40799963Stochastic binding of Ca2+ ions in the dyadic cleft; continuous versus random walk description of diffusion
Q47760446Stress enhanced calcium kinetics in a neuron
Q36808333Synthetic protocell biology: from reproduction to computation
Q58928389Systems Biology
Q58928412Systems Biology
Q35985178Systems analysis of RNA trafficking in neural cells
Q27334339Targeting the biophysical properties of the myeloma initiating cell niches: a pharmaceutical synergism analysis using multi-scale agent-based modeling
Q36842925The hard cell: from proteomics to a whole cell model
Q37222628The secret marriage between calcium and tumor angiogenesis.
Q51902683Toward realistic modeling of dynamic processes in cell signaling: quantification of macromolecular crowding effects.
Q34818743Towards a quantitative representation of the cell signaling mechanisms of hallucinogens: measurement and mathematical modeling of 5-HT1A and 5-HT2A receptor-mediated ERK1/2 activation
Q28553092Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories
Q47959485Understanding the Functional Roles of Multiple Extracellular Domains in Cell Adhesion Molecules with a Coarse-Grained Model
Q36458860Use of virtual cell in studies of cellular dynamics
Q35782939Virtual Cell: computational tools for modeling in cell biology
Q81363450[In virtuo model for research on allergic reaction]

Search more.