scholarly article | Q13442814 |
P2093 | author name string | Lisa E Wallace | |
Hanna E Dorman | |||
Lavanya Challagundla | |||
Gregory L Wheeler | |||
Alenda Buchanan | |||
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Complete Chloroplast Genome Sequences from Korean Ginseng (Panax schinseng Nees) and Comparative Analysis of Sequence Evolution among 17 Vascular Plants | Q22066068 | ||
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots | Q22066285 | ||
Repetitive DNA and next-generation sequencing: computational challenges and solutions | Q22122001 | ||
20,000 species and five key markers: The status of molecular bryophyte phylogenetics | Q22713348 | ||
Uniparental inheritance of mitochondrial and chloroplast genes: mechanisms and evolution | Q24561429 | ||
A DNA barcode for land plants | Q24655788 | ||
Structure of Taq polymerase with DNA at the polymerase active site | Q27733244 | ||
Paternal, maternal, and biparental inheritance of the chloroplast genome in Passiflora (Passifloraceae): implications for phylogenetic studies | Q28239581 | ||
Impact of Geography and Climate on the Genetic Differentiation of the Subtropical Pine Pinus yunnanensis | Q28681079 | ||
Complete plastid genome sequencing of Trochodendraceae reveals a significant expansion of the inverted repeat and suggests a Paleogene divergence between the two extant species | Q28709289 | ||
Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree | Q28709618 | ||
Complete chloroplast genome sequences of important oilseed crop Sesamum indicum L | Q28729990 | ||
Applications of next generation sequencing in molecular ecology of non-model organisms | Q28744282 | ||
Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes | Q28749553 | ||
Chloroplast gene sequences and the study of plant evolution | Q28775906 | ||
Statistical Tests of Neutrality of Mutations Against Population Growth, Hitchhiking and Background Selection | Q29547349 | ||
Estimation of average heterozygosity and genetic distance from a small number of individuals | Q29614682 | ||
The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis | Q29614978 | ||
Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III | Q29616844 | ||
Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics | Q31024833 | ||
Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species | Q33523040 | ||
Assembly algorithms for next-generation sequencing data | Q33538377 | ||
De novo assembly and characterization of leaf transcriptome for the development of functional molecular markers of the extremophile multipurpose tree species Prosopis alba | Q33559148 | ||
Cost-effective, species-specific microsatellite development for the endangered Dwarf Bulrush (Typha minima) using next-generation sequencing technology | Q33609464 | ||
Intramolecular recombination of chloroplast genome mediated by short direct-repeat sequences in wheat species | Q33671219 | ||
Current trends in microsatellite genotyping. | Q33897404 | ||
Choosing and using a plant DNA barcode | Q33920783 | ||
Multi-locus inference of population structure: a comparison between single nucleotide polymorphisms and microsatellites | Q33942971 | ||
Genome-wide distribution and organization of microsatellites in plants: an insight into marker development in Brachypodium | Q33945391 | ||
An evaluation of genetic distances for use with microsatellite loci. | Q33964342 | ||
Cryptic invasion by a non-native genotype of the common reed, Phragmites australis, into North America | Q34013574 | ||
Asymmetrical gene flow in a hybrid zone of Hawaiian Schiedea (Caryophyllaceae) species with contrasting mating systems | Q34031510 | ||
Gene flow among different taxonomic units: evidence from nuclear and cytoplasmic markers in Cedrus plantation forests. | Q34267104 | ||
Always look on both sides: phylogenetic information conveyed by simple sequence repeat allele sequences. | Q34342285 | ||
Another look at the root of the angiosperms reveals a familiar tale | Q34395825 | ||
Complete Chloroplast Genome Sequences of Mongolia Medicine Artemisia frigida and Phylogenetic Relationships with Other Plants | Q34608652 | ||
The Complete Chloroplast Genome Sequence of the Medicinal Plant Salvia miltiorrhiza | Q34608728 | ||
The hidden side of invasions: massive introgression by local genes | Q34775522 | ||
Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis | Q34808348 | ||
Contrasts between the phylogeographic patterns of chloroplast and nuclear DNA highlight a role for pollen-mediated gene flow in preventing population divergence in an East Asian temperate tree | Q35241615 | ||
Evidence for the equal resilience of Triodia spp. (Poaceae), from different functional groups, to frequent fire dating back to the late Pleistocene | Q35623388 | ||
The Complete Chloroplast Genome Sequence of Cephalotaxus oliveri (Cephalotaxaceae): Evolutionary Comparison of Cephalotaxus Chloroplast DNAs and Insights into the Loss of Inverted Repeat Copies in Gymnosperms | Q36810530 | ||
A frameshift mutation of the chloroplast matK coding region is associated with chlorophyll deficiency in the Cryptomeria japonica virescent mutant Wogon-Sugi | Q37215463 | ||
The complete chloroplast DNA sequence of Eleutherococcus senticosus (Araliaceae); comparative evolutionary analyses with other three asterids | Q37461572 | ||
Chloroplast simple sequence repeats (cpSSRs): technical resources and recommendations for expanding cpSSR discovery and applications to a wide array of plant species | Q37874712 | ||
Range-wide phylogeography and gene zones in Pinus pinaster Ait. revealed by chloroplast microsatellite markers. | Q38924616 | ||
Long-term population isolation in the endangered tropical tree species Caesalpinia echinata Lam. revealed by chloroplast microsatellites. | Q39182688 | ||
The complete chloroplast genome of 17 individuals of pest species Jacobaea vulgaris: SNPs, microsatellites and barcoding markers for population and phylogenetic studies | Q42065829 | ||
Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes | Q42510317 | ||
Chloroplast microsatellites and mitochondrial nad1 intron 2 sequences indicate congruent phylogenetic relationships among Swiss stone pine (Pinus cembra), Siberian stone pine (Pinus sibirica), and Siberian dwarf pine (Pinus pumila). | Q42652403 | ||
Chloroplast DNA phylogeography of European ashes, Fraxinus sp. (Oleaceae): roles of hybridization and life history traits | Q42688689 | ||
Beans in Europe: origin and structure of the European landraces of Phaseolus vulgaris L. | Q43057684 | ||
Chloroplast microsatellites reveal colonization and metapopulation dynamics in the Canary Island pine. | Q43173294 | ||
Genetic and Floral Divergence among Sympatric Populations of Gymnadenia conopsea s.l. (Orchideaceae) with Different Flowering Phenology | Q43679332 | ||
The complete chloroplast genome of Origanum vulgare L. (Lamiaceae) | Q43766379 | ||
Complete chloroplast DNA sequence from a Korean endemic genus, Megaleranthis saniculifolia, and its evolutionary implications | Q44006070 | ||
Spread of herbicide-resistant weedy rice (red rice, Oryza sativa L.) after 5 years of Clearfield rice cultivation in Italy | Q44241380 | ||
A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms | Q44546989 | ||
Genetic discontinuity revealed by chloroplast microsatellites in eastern North American Abies (Pinaceae). | Q44873405 | ||
Chloroplast diversity in a putative hybrid swarm of Ponderosae (Pinaceae). | Q46192380 | ||
Chloroplast genome analysis of Australian eucalypts--Eucalyptus, Corymbia, Angophora, Allosyncarpia and Stockwellia (Myrtaceae). | Q46640288 | ||
Phylogeographic structure of jack pine (Pinus banksiana; Pinaceae) supports the existence of a coastal glacial refugium in northeastern North America | Q47252546 | ||
Size homoplasy in chloroplast microsatellites of wild perennial relatives of soybean (Glycine subgenus Glycine) | Q47294463 | ||
Chloroplast microsatellites: measures of genetic diversity and the effect of homoplasy | Q47303232 | ||
Causes of size homoplasy among chloroplast microsatellites in closely related Clusia species. | Q47424962 | ||
A set of primers for the amplification of 20 chloroplast microsatellites in Pinaceae | Q48061584 | ||
Hypervariable microsatellites provide a general source of polymorphic DNA markers for the chloroplast genome | Q48070856 | ||
The development and evaluation of consensus chloroplast primer pairs that possess highly variable sequence regions in a diverse array of plant taxa | Q48238783 | ||
Chloroplast microsatellites: new tools for studies in plant ecology and evolution. | Q51203110 | ||
Elucidating polyploidization of bermudagrasses as assessed by organelle and nuclear DNA markers | Q51492691 | ||
A case of chloroplast heteroplasmy in kiwifruit (Actinidia deliciosa) that is not transmitted during sexual reproduction | Q52945205 | ||
Biparental inheritance of chloroplast DNA and the existence of heteroplasmic cells in alfalfa | Q54262070 | ||
Contrasting patterns of pollen and seed flow influence the spatial genetic structure of sweet vernal grass (Anthoxanthum odoratum) populations | Q54343694 | ||
High variability of chloroplast DNA in three Mediterranean evergreen oaks indicates complex evolutionary history | Q57240513 | ||
Pollen pool heterogeneity in shortleaf pine, Pinus echinata Mill | Q58375366 | ||
Complete chloroplast genome sequence of Magnolia grandiflora and comparative analysis with related species | Q60294666 | ||
Quantitative assessment of heteroplasmy levels in Senecio vulgaris chloroplast DNA | Q60534500 | ||
Diversity and genetic structure in populations of Pseudotsuga menziesii (Pinaceae) at chloroplast microsatellite loci | Q74161778 | ||
Sequence-repeat polymorphisms exhibit the signature of recombination in lodgepole pine chloroplast DNA | Q74631657 | ||
DNA from bird-dispersed seed and wind-disseminated pollen provides insights into postglacial colonization and population genetic structure of whitebark pine (Pinus albicaulis) | Q77664877 | ||
High level of variation at Abies alba chloroplast microsatellite loci in Europe | Q78127716 | ||
Use of cpSSRs for the characterisation of yam phylogeny in Benin | Q81045225 | ||
Phylogeographic inferences from chloroplast DNA: quantifying the effects of mutations in repetitive and non-repetitive sequences | Q83688126 | ||
Single nucleotide sequence analysis: a cost- and time-effective protocol for the analysis of microsatellite- and indel-rich chloroplast DNA regions | Q84129784 | ||
Improving sequencing quality from PCR products containing long mononucleotide repeats | Q84457385 | ||
Heteroplasmy of chloroplast DNA in Medicago | Q86839165 | ||
Variable length chloroplast markers for population genetic studies in Acmispon (Fabaceae) | Q87356031 | ||
P433 | issue | 12 | |
P921 | main subject | botany | Q441 |
P577 | publication date | 2014-11-20 | |
P13046 | publication type of scholarly work | review article | Q7318358 |
P1433 | published in | Applications in Plant Sciences | Q27724431 |
P1476 | title | A review of the prevalence, utility, and caveats of using chloroplast simple sequence repeats for studies of plant biology | |
P478 | volume | 2 |
Q35975666 | An empirical review: Characteristics of plant microsatellite markers that confer higher levels of genetic variation |
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Q33653626 | Characterization and Phylogenetic Analysis of Ancient Italian Landraces of Pear |
Q41673681 | Chloroplast Genome Sequence of Clusterbean (Cyamopsis tetragonoloba L.): Genome Structure and Comparative Analysis |
Q37486739 | Chloroplast Genome Sequence of Pigeonpea (Cajanus cajan (L.) Millspaugh) and Cajanus scarabaeoides (L.) Thouars: Genome Organization and Comparison with Other Legumes. |
Q44471552 | Chloroplast genomes of Lilium lancifolium, L. amabile, L. callosum, and L. philadelphicum: Molecular characterization and their use in phylogenetic analysis in the genus Lilium and other allied genera in the order Liliales. |
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