| scholarly article | Q13442814 |
| review article | Q7318358 |
| P2093 | author name string | J Galindo | |
| R Ekblom | |||
| P2860 | cites work | Evolutionary and ecological functional genomics | Q57196805 |
| Expressed Sequence Tag-Linked Microsatellites as a Source of Gene-Associated Polymorphisms for Detecting Signatures of Divergent Selection in Atlantic Salmon (Salmo salar L.) | Q57662665 | ||
| Genome-wide analysis of alternative splicing evolution among Mus subspecies | Q83889124 | ||
| Editorial | Q94101922 | ||
| Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in the Heliconius melpomene clade | Q21092449 | ||
| De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data | Q21183889 | ||
| Insertion-deletion polymorphisms (indels) as genetic markers in natural populations | Q21283773 | ||
| Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags | Q21563319 | ||
| The sequence and de novo assembly of the giant panda genome | Q22122211 | ||
| The complete genome of an individual by massively parallel DNA sequencing | Q22122226 | ||
| RNA-Seq: a revolutionary tool for transcriptomics | Q24596169 | ||
| The transcriptional landscape of the yeast genome defined by RNA sequencing | Q24633693 | ||
| Genes mirror geography within Europe | Q24644872 | ||
| Ancient DNA reveals late survival of mammoth and horse in interior Alaska | Q24656152 | ||
| What can you do with 0.1× genome coverage? A case study based on a genome survey of the scuttle fly Megaselia scalaris (Phoridae) | Q27489427 | ||
| High-resolution profiling of histone methylations in the human genome | Q27860906 | ||
| Chromatin modifications and their function | Q27861067 | ||
| Rapid SNP discovery and genetic mapping using sequenced RAD markers | Q28090832 | ||
| How to map billions of short reads onto genomes | Q28244503 | ||
| Sequencing the nuclear genome of the extinct woolly mammoth | Q28301388 | ||
| The value of avian genomics to the conservation of wildlife | Q28748655 | ||
| Mimulus is an emerging model system for the integration of ecological and genomic studies | Q29305571 | ||
| Next-generation DNA sequencing | Q29547447 | ||
| Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing | Q29614576 | ||
| Genotype, haplotype and copy-number variation in worldwide human populations | Q29615885 | ||
| Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning | Q29615977 | ||
| Applications of next-generation sequencing technologies in functional genomics | Q29619225 | ||
| Accuracy and quality of massively parallel DNA pyrosequencing | Q29622857 | ||
| Genome-wide in situ exon capture for selective resequencing | Q30004193 | ||
| A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454 | Q30481440 | ||
| Simple cDNA normalization using kamchatka crab duplex-specific nuclease | Q30828367 | ||
| Epigenetics for ecologists | Q40153209 | ||
| Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms | Q41597733 | ||
| African Drosophila melanogaster and D. simulans populations have similar levels of sequence variability, suggesting comparable effective population sizes | Q41952188 | ||
| Mapping the chromosomal targets of STAT1 by Sequence Tag Analysis of Genomic Enrichment (STAGE). | Q41977742 | ||
| Characterization of a hotspot for mimicry: assembly of a butterfly wing transcriptome to genomic sequence at the HmYb/Sb locus. | Q42021491 | ||
| Pyrosequencing the Manduca sexta larval midgut transcriptome: messages for digestion, detoxification and defence. | Q42023246 | ||
| The next generation of molecular markers from massively parallel sequencing of pooled DNA samples | Q42027931 | ||
| Sequencing goes 454 and takes large-scale genomics into the wild | Q42030345 | ||
| Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing. | Q42030448 | ||
| Low-coverage massively parallel pyrosequencing of cDNAs enables proteomics in non-model species: comparison of a species-specific database generated by pyrosequencing with databases from related species for proteome analysis of pea chloroplast envel | Q42651183 | ||
| Life history in a model system: opening the black box with Arabidopsis thaliana | Q42920042 | ||
| An EST-based genome scan using 454 sequencing in the marine snail Littorina saxatilis | Q42942641 | ||
| Nucleotide divergence vs. gene expression differentiation: comparative transcriptome sequencing in natural isolates from the carrion crow and its hybrid zone with the hooded crow | Q43639023 | ||
| Mining transcriptome sequences towards identifying adaptive single nucleotide polymorphisms in lake whitefish species pairs (Coregonus spp. Salmonidae). | Q43757143 | ||
| Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities | Q45183748 | ||
| An approach to transcriptome analysis of non-model organisms using short-read sequences | Q45613856 | ||
| New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system | Q45795962 | ||
| Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing. | Q46040746 | ||
| Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils | Q46166547 | ||
| Common pattern of evolution of gene expression level and protein sequence in Drosophila | Q46227308 | ||
| Whole-genome sequencing and variant discovery in C. elegans. | Q47595683 | ||
| Pyrosequencing of the midgut transcriptome of the poplar leaf beetle Chrysomela tremulae reveals new gene families in Coleoptera | Q48013112 | ||
| Spatial pattern of MHC class II variation in the great snipe (Gallinago media). | Q48080567 | ||
| Mammalian housekeeping genes evolve more slowly than tissue-specific genes | Q48221814 | ||
| Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces. | Q50453649 | ||
| Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae). | Q51188785 | ||
| Microarray-based genomic selection for high-throughput resequencing. | Q51898353 | ||
| Wasp gene expression supports an evolutionary link between maternal behavior and eusociality. | Q52684390 | ||
| A genetic basis for the phenotypic differentiation between siscowet and lean lake trout (Salvelinus namaycush). | Q54434390 | ||
| De Novo Next Generation Sequencing of Plant Genomes | Q55112648 | ||
| Inbreeding and extinction in a butterfly metapopulation | Q55883371 | ||
| On the use of large marker panels to estimate inbreeding and relatedness: empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs | Q57003456 | ||
| The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing | Q30829701 | ||
| Construction of a robust microarray from a non-model species (largemouth bass) using pyrosequencing technology | Q30914537 | ||
| Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology | Q33261408 | ||
| Genome-wide patterns of gene flow across a house mouse hybrid zone | Q33306332 | ||
| SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries | Q33320976 | ||
| High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome | Q33347881 | ||
| Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome | Q33364597 | ||
| Genome-wide high throughput analysis of DNA methylation in eukaryotes | Q33379320 | ||
| Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches | Q33384963 | ||
| SuperSAGE: the drought stress-responsive transcriptome of chickpea roots | Q33386215 | ||
| DNA barcoding for ecologists | Q33394823 | ||
| DSN depletion is a simple method to remove selected transcripts from cDNA populations | Q33398063 | ||
| Identification of microsatellites from an extinct moa species using high-throughput (454) sequence data. | Q33421522 | ||
| Microsatellite discovery by deep sequencing of enriched genomic libraries | Q33421527 | ||
| Discovering genetic polymorphisms in next-generation sequencing data | Q33433674 | ||
| Next-generation pyrosequencing of gonad transcriptomes in the polyploid lake sturgeon (Acipenser fulvescens): the relative merits of normalization and rarefaction in gene discovery | Q33436446 | ||
| Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection | Q33441999 | ||
| From conservation genetics to conservation genomics | Q33443348 | ||
| Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx | Q33444290 | ||
| Gene discovery using massively parallel pyrosequencing to develop ESTs for the flesh fly Sarcophaga crassipalpis. | Q33447915 | ||
| Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank vole Myodes glareolus | Q33452426 | ||
| De novo transcriptome assembly with ABySS. | Q33467690 | ||
| Shedding light on an extremophile lifestyle through transcriptomics | Q33472938 | ||
| Characterization of the Zoarces viviparus liver transcriptome using massively parallel pyrosequencing | Q33489048 | ||
| Comparison of next generation sequencing technologies for transcriptome characterization | Q33489077 | ||
| A 454 sequencing approach for large scale phylogenomic analysis of the common emperor scorpion (Pandinus imperator). | Q33495422 | ||
| 454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity | Q33496293 | ||
| Global characterization of Artemisia annua glandular trichome transcriptome using 454 pyrosequencing | Q33509632 | ||
| Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella | Q33520833 | ||
| Pyrosequencing of Mytilus galloprovincialis cDNAs: tissue-specific expression patterns | Q33527406 | ||
| Genome-wide SNP detection in the great tit Parus major using high throughput sequencing. | Q33544859 | ||
| Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping. | Q33544863 | ||
| Assembly free comparative genomics of short-read sequence data discovers the needles in the haystack. | Q33544865 | ||
| Rapid evolution and selection inferred from the transcriptomes of sympatric crater lake cichlid fishes | Q33544869 | ||
| Digital gene expression analysis of the zebra finch genome | Q33548494 | ||
| msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design | Q33902712 | ||
| Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species | Q33998296 | ||
| Computation for ChIP-seq and RNA-seq studies | Q33999125 | ||
| VarScan: variant detection in massively parallel sequencing of individual and pooled samples | Q34018143 | ||
| Target-enrichment strategies for next-generation sequencing | Q34095491 | ||
| RNA-Seq-quantitative measurement of expression through massively parallel RNA-sequencing | Q34658292 | ||
| Next-generation sequencing transforms today's biology | Q34731728 | ||
| Single-molecule DNA sequencing of a viral genome | Q34767716 | ||
| Single-molecule DNA sequencing technologies for future genomics research | Q34812331 | ||
| Direct RNA sequencing | Q35004834 | ||
| Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin | Q35173699 | ||
| Evolutionary and ecological functional genomics. | Q35191491 | ||
| In silico gene expression analysis--an overview | Q35971444 | ||
| Genomics and conservation genetics | Q36565267 | ||
| Microarray challenges in ecology | Q36734202 | ||
| Cross-species microarray hybridizations: a developing tool for studying species diversity | Q36741691 | ||
| Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits. | Q36741994 | ||
| Ecological genomics in Daphnia: stress responses and environmental sex determination | Q36829471 | ||
| Pyrosequence analysis of expressed sequence tags for Manduca sexta hemolymph proteins involved in immune responses | Q36840514 | ||
| Estimation of allele frequencies from high-coverage genome-sequencing projects | Q37173368 | ||
| Gene mapping in the wild with SNPs: guidelines and future directions. | Q37263982 | ||
| Rapidly developing functional genomics in ecological model systems via 454 transcriptome sequencing | Q37302820 | ||
| Quantifying adaptive evolution in the Drosophila immune system | Q37380422 | ||
| Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence | Q37519703 | ||
| Advantages of next-generation sequencing versus the microarray in epigenetic research | Q37522879 | ||
| Short-read sequencing technologies for transcriptional analyses. | Q37539957 | ||
| Characterizing natural variation using next-generation sequencing technologies. | Q37607823 | ||
| Conservation genetics in transition to conservation genomics | Q37708830 | ||
| Sequencing breakthroughs for genomic ecology and evolutionary biology | Q37876496 | ||
| Characterization of marine isoprene-degrading communities. | Q38871260 | ||
| DeepSAGE--digital transcriptomics with high sensitivity, simple experimental protocol and multiplexing of samples | Q39117868 | ||
| Ultradeep bisulfite sequencing analysis of DNA methylation patterns in multiple gene promoters by 454 sequencing. | Q39813815 | ||
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | model organism | Q213907 |
| P6104 | maintained by WikiProject | WikiProject Ecology | Q10818384 |
| P304 | page(s) | 1-15 | |
| P577 | publication date | 2011-07-01 | |
| P1433 | published in | Heredity | Q2261546 |
| P1476 | title | Applications of next generation sequencing in molecular ecology of non-model organisms | |
| P478 | volume | 107 |
| Q38671919 | 2b-RAD genotyping for population genomic studies of Chagas disease vectors: Rhodnius ecuadoriensis in Ecuador. |
| Q26741507 | A Belated Green Revolution for Cannabis: Virtual Genetic Resources to Fast-Track Cultivar Development |
| Q37746534 | A Dense Brown Trout (Salmo trutta) Linkage Map Reveals Recent Chromosomal Rearrangements in the Salmo Genus and the Impact of Selection on Linked Neutral Diversity |
| Q57294361 | A European Whitefish Linkage Map and Its Implications for Understanding Genome-Wide Synteny Between Salmonids Following Whole Genome Duplication |
| Q34600824 | A NGS approach to the encrusting Mediterranean sponge Crella elegans (Porifera, Demospongiae, Poecilosclerida): transcriptome sequencing, characterization and overview of the gene expression along three life cycle stages. |
| Q58771690 | A RAD-sequencing approach to genome-wide marker discovery, genotyping, and phylogenetic inference in a diverse radiation of primates |
| Q55220169 | A broad genomic panel of microsatellite loci from Brycon orbignyanus (Characiformes: Bryconidae) an endangered migratory Neotropical fish. |
| Q39333608 | A candidate gene association study for growth performance in an improved giant freshwater prawn (Macrobrachium rosenbergii ) culture line |
| Q34287060 | A comparison of next generation sequencing technologies for transcriptome assembly and utility for RNA-Seq in a non-model bird |
| Q91913317 | A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes |
| Q34106917 | A de novo transcriptome of the Asian tiger mosquito, Aedes albopictus, to identify candidate transcripts for diapause preparation |
| Q36141869 | A deep sequencing analysis of transcriptomes and the development of EST-SSR markers in mungbean (Vigna radiata). |
| Q26860930 | A field guide to whole-genome sequencing, assembly and annotation |
| Q35977500 | A genes eye view of ontogeny: de novo assembly and profiling of the Gryllus rubens transcriptome |
| Q34529905 | A house finch (Haemorhous mexicanus) spleen transcriptome reveals intra- and interspecific patterns of gene expression, alternative splicing and genetic diversity in passerines |
| Q36032689 | A new amplicon based approach of whole mitogenome sequencing for phylogenetic and phylogeographic analysis: An example of East African white-eyes (Aves, Zosteropidae). |
| Q36558586 | A new, sensitive marine microalgal recombinant biosensor using luminescence monitoring for toxicity testing of antifouling biocides |
| Q38548998 | A practical guide to environmental association analysis in landscape genomics. |
| Q38002079 | A review of the application of molecular genetics for fisheries management and conservation of sharks and rays. |
| Q34654847 | A review of the prevalence, utility, and caveats of using chloroplast simple sequence repeats for studies of plant biology |
| Q34234373 | A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica |
| Q35071543 | A simple strategy for development of single nucleotide polymorphisms from non-model species and its application in Panax |
| Q31141362 | ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa Gene Expression Data with Denoising Autoencoders Illuminates Microbe-Host Interactions |
| Q35015999 | Accuracy of allele frequency estimation using pooled RNA-Seq |
| Q33551390 | Adaptation and evolution of deep-sea scale worms (Annelida: Polynoidae): insights from transcriptome comparison with a shallow-water species |
| Q56437588 | Adaptation in marine invasion: a genetic perspective |
| Q34134030 | Amplification biases and consistent recovery of loci in a double-digest RAD-seq protocol |
| Q40058699 | An ecological model organism flies into the genomics era. |
| Q35975666 | An empirical review: Characteristics of plant microsatellite markers that confer higher levels of genetic variation |
| Q58130461 | An environmental DNA sampling method for aye-ayes from their feeding traces |
| Q28681619 | Analysis of the transcriptome of the Indonesian coelacanth Latimeria menadoensis |
| Q38369611 | Ancient DNA reveals genetic stability despite demographic decline: 3,000 years of population history in the endemic Hawaiian petrel |
| Q28649361 | Ancient population genomics and the study of evolution |
| Q45334552 | Annotation of nerve cord transcriptome in earthworm Eisenia fetida |
| Q34111807 | Applications of next-generation sequencing to phylogeography and phylogenetics |
| Q39747654 | Applying SNP-Derived Molecular Coancestry Estimates to Captive Breeding Programs |
| Q38620807 | Assembly and RNA-free annotation of highly heterozygous genomes: the case of the thick-billed murre (Uria lomvia). |
| Q36762709 | Aye-aye population genomic analyses highlight an important center of endemism in northern Madagascar |
| Q34007496 | Back from the brink: potential for genetic rescue in a critically endangered tree |
| Q57063293 | Biogeography of the Kimberley, Western Australia: a review of landscape evolution and biotic response in an ancient refugium |
| Q94518121 | Blast2Fish: a reference-based annotation web tool for transcriptome analysis of non-model teleost fish |
| Q33890010 | Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing. |
| Q46470411 | Building strong relationships between conservation genetics and primary industry leads to mutually beneficial genomic advances |
| Q35896222 | COMPUTATIONAL APPROACHES TO STUDY MICROBES AND MICROBIOMES. |
| Q28709618 | Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree |
| Q91723602 | Categorization of species as native or nonnative using DNA sequence signatures without a complete reference library |
| Q31097750 | Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensive in silico assessment of RNA-seq experiments |
| Q34721847 | Characterisation of a transcriptome to find sequence differences between two differentially migrating subspecies of the willow warbler Phylloscopus trochilus |
| Q91629243 | Characterization and analysis of the transcriptome in Gymnocypris selincuoensis on the Qinghai-Tibetan Plateau using single-molecule long-read sequencing and RNA-seq |
| Q46263968 | Characterization of the Lycium barbarum fruit transcriptome and development of EST-SSR markers. |
| Q36182038 | Characterization of the complete mitochondrial genome and a set of polymorphic microsatellite markers through next-generation sequencing for the brown brocket deer Mazama gouazoubira |
| Q38481980 | Characterization of the house sparrow (Passer domesticus) transcriptome: a resource for molecular ecology and immunogenetics. |
| Q34304000 | Characterization of the kidney transcriptome of the South American olive mouse Abrothrix olivacea |
| Q34528786 | Characterization of transcriptomes from sexual and asexual lineages of a New Zealand snail (Potamopyrgus antipodarum). |
| Q34637378 | Cis-regulatory sequence variation and association with Mycoplasma load in natural populations of the house finch (Carpodacus mexicanus). |
| Q51160122 | Closing the genotype-phenotype gap: emerging technologies for evolutionary genetics in ecological model vertebrate systems. |
| Q34469329 | Combining next-generation sequencing and microarray technology into a transcriptomics approach for the non-model organism Chironomus riparius |
| Q35085528 | Community genetics in the time of next-generation molecular technologies. |
| Q38444540 | Comparative Analysis of the Chrysanthemum Leaf Transcript Profiling in Response to Salt Stress |
| Q35815210 | Comparative RNA seq analysis of the New Zealand glowworm Arachnocampa luminosa reveals bioluminescence-related genes |
| Q28603342 | Comparative Transcriptomic Approaches Exploring Contamination Stress Tolerance in Salix sp. Reveal the Importance for a Metaorganismal de Novo Assembly Approach for Nonmodel Plants |
| Q28660874 | Comparative inner ear transcriptome analysis between the Rickett's big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx). |
| Q35648724 | Comparative transcriptomic analysis revealed adaptation mechanism of Phrynocephalus erythrurus, the highest altitude Lizard living in the Qinghai-Tibet Plateau |
| Q97533250 | Comparative transcriptomic and proteomic analyses provide insights into functional genes for hypoxic adaptation in embryos of Tibetan chickens |
| Q96127328 | Comparative transcriptomics of an arctic foundation species, tussock cottongrass (Eriophorum vaginatum), during an extreme heat event |
| Q42695415 | Comparative transcriptomics of cyprinid minnows and carp in a common wild setting: a resource for ecological genomics in freshwater communities |
| Q93003167 | Comparing Pool-seq, Rapture, and GBS genotyping for inferring weak population structure: The American lobster (Homarus americanus) as a case study |
| Q34154419 | Comparison between Normalised and Unnormalised 454-Sequencing Libraries for Small-Scale RNA-Seq Studies. |
| Q89802441 | Comparison of sequencing methods and data processing pipelines for whole genome sequencing and minority single nucleotide variant (mSNV) analysis during an influenza A/H5N8 outbreak |
| Q95661016 | Comparison of two different host plant genera responding to grapevine leafroll-associated virus 3 infection |
| Q41660546 | Complementary RNA-Sequencing Based Transcriptomics and iTRAQ Proteomics Reveal the Mechanism of the Alleviation of Quinclorac Stress by Salicylic Acid in Oryza sativa ssp. japonica. |
| Q55216940 | Complex signatures of genomic variation of two non-model marine species in a homogeneous environment. |
| Q33746162 | Comprehensive transcriptome study to develop molecular resources of the copepod Calanus sinicus for their potential ecological applications |
| Q38477563 | Conservation and divergence of gene expression plasticity following c. 140 million years of evolution in lodgepole pine (Pinus contorta) and interior spruce (Picea glauca×Picea engelmannii). |
| Q34528056 | Conservation genetics of a threatened butterfly: comparison of allozymes, RAPDs and microsatellites |
| Q38429205 | Conserved Transcription Factors Steer Growth-Related Genomic Programs in Daphnia |
| Q35401410 | Contribution of genetics to ecological restoration. |
| Q39173779 | Cross-species outlier detection reveals different evolutionary pressures between sister species |
| Q119652624 | Cryptic diversity of Crocidura shrews in the savannahs of Eastern and Southern Africa |
| Q34195296 | Cutoffs and k-mers: implications from a transcriptome study in allopolyploid plants |
| Q37430232 | DNA fingerprinting in botany: past, present, future |
| Q49590578 | De novo Assembly and Annotation of the Antarctic Alga Prasiola crispa Transcriptome. |
| Q38467376 | De novo assembly and analysis of crow lungs transcriptome. |
| Q55260306 | De novo assembly and annotation of Hyalomma dromedarii tick (Acari: Ixodidae) sialotranscriptome with regard to gender differences in gene expression. |
| Q38913838 | De novo assembly and annotation of the salivary gland transcriptome of Rhipicephalus appendiculatus male and female ticks during blood feeding |
| Q38451341 | De novo assembly and characterization of leaf and floral transcriptomes of the hybridizing bromeliad species (Pitcairnia spp.) adapted to Neotropical Inselbergs. |
| Q48155279 | De novo assembly and characterization of the Hucho taimen transcriptome. |
| Q38478223 | De novo assembly and characterization of the skeletal muscle and electric organ transcriptomes of the African weakly electric fish Campylomormyrus compressirostris (Mormyridae, Teleostei). |
| Q35449148 | De novo assembly and characterization of the transcriptome of seagrass Zostera marina using Illumina paired-end sequencing |
| Q35863191 | De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite |
| Q64092728 | De novo assembly of transcriptomes, mining, and development of novel EST-SSR markers in Curcuma alismatifolia (Zingiberaceae family) through Illumina sequencing |
| Q86998237 | De novo characterization of the liver transcriptome of javelin goby Synechogobius hasta and analysis of its transcriptomic profile following waterborne copper exposure |
| Q28715973 | De novo sequence assembly and characterisation of a partial transcriptome for an evolutionarily distinct reptile, the tuatara (Sphenodon punctatus) |
| Q46312481 | De novo transcriptome assembly and developmental mode specific gene expression of Pygospio elegans |
| Q35262504 | De novo transcriptome assembly for a non-model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas disease |
| Q55260537 | De novo transcriptome assembly of Pueraria montana var. lobata and Neustanthus phaseoloides for the development of eSSR and SNP markers: narrowing the US origin(s) of the invasive kudzu. |
| Q27316917 | De novo transcriptome sequencing and analysis of Coccinella septempunctata L. in non-diapause, diapause and diapause-terminated states to identify diapause-associated genes |
| Q36269797 | De novo transcriptome sequencing and analysis of male, pseudo-male and female yellow perch, Perca flavescens. |
| Q28539571 | De-novo RNA sequencing and metabolite profiling to identify genes involved in anthocyanin biosynthesis in Korean black raspberry (Rubus coreanus Miquel) |
| Q30945047 | Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies |
| Q46843444 | Design of a 9K illumina BeadChip for polar bears (Ursus maritimus) from RAD and transcriptome sequencing. |
| Q91736408 | Development and characterization of 16 novel microsatellite markers by Transcriptome sequencing for Angelica dahurica and test for cross-species amplification |
| Q41021986 | Development and characterization of 24 polymorphic microsatellite loci for the freshwater fish Ichthyoelephas longirostris (Characiformes: Prochilodontidae). |
| Q28833832 | Development and characterization of microsatellite primers in the federally endangered Astragalus bibullatus (Fabaceae) |
| Q57616717 | Development and characterization of novel microsatellite markers for the Common Pheasant (Phasianus colchicus) using RAD-seq |
| Q35852906 | Development and validation of a mixed-tissue oligonucleotide DNA microarray for Atlantic bluefin tuna, Thunnus thynnus (Linnaeus, 1758). |
| Q33608483 | Development of 44 Novel Polymorphic SSR Markers for Determination of Shiitake Mushroom (Lentinula edodes) Cultivars |
| Q44416597 | Development of Genome-Wide SSR Markers from Angelica gigas Nakai Using Next Generation Sequencing |
| Q28829725 | Development of Multiple Polymorphic Microsatellite Markers for Ceratina calcarata (Hymenoptera: Apidae) Using Genome-Wide Analysis |
| Q39267520 | Development of SNP-genotyping arrays in two shellfish species |
| Q38695391 | Development of a Traceability System Based on a SNP Array for Large-Scale Production of High-Value White Spruce (Picea glauca). |
| Q36163494 | Development of a universal double-digest RAD sequencing approach for a group of nonmodel, ecologically and economically important insect and fish taxa. |
| Q35015869 | Development of genomic resources for the tick Ixodes ricinus: isolation and characterization of single nucleotide polymorphisms |
| Q42684367 | Development of high-density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners |
| Q58806719 | Development of transcriptome genetic markers for the great snipe (Gallinago media) |
| Q49202101 | Developmental plasticity: Bridging research in evolution and human health. |
| Q36689323 | Differences in gene expression within a striking phenotypic mosaic Eucalyptus tree that varies in susceptibility to herbivory |
| Q104471947 | Different expression of lipid metabolism-related genes in Shandong black cattle and Luxi cattle based on transcriptome analysis |
| Q34460080 | Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut |
| Q40519839 | Differential expression of the aryl hydrocarbon receptor pathway associates with craniofacial polymorphism in sympatric Arctic charr. |
| Q55348409 | Differential gene expression revealed with RNA-Seq and parallel genotype selection of the ornithine decarboxylase gene in fish inhabiting polluted areas. |
| Q55339107 | Discovery of SNPs for individual identification by reduced representation sequencing of moose (Alces alces). |
| Q36316448 | Discovery of genome-wideSNPs by RAD-seqand the genetic diversity of captive hog deer (Axis porcinus). |
| Q41262648 | Disentangling the complex evolutionary history of the Western Palearctic blue tits (Cyanistes spp.) - phylogenomic analyses suggest radiation by multiple colonization events and subsequent isolation |
| Q93106464 | Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting |
| Q35688396 | Drosophila anti-nematode and antibacterial immune regulators revealed by RNA-Seq |
| Q34740671 | Dynamics of copy number variation in host races of the pea aphid |
| Q35098835 | Dynamics of the chili pepper transcriptome during fruit development |
| Q37984119 | Eco-evolutionary dynamics in a changing world |
| Q39314475 | Effects of introgression on the genetic population structure of two ecologically and economically important conifer species: lodgepole pine (Pinus contorta var. latifolia) and jack pine (Pinus banksiana). |
| Q46267083 | Environmental versus geographical determinants of genetic structure in two subalpine conifers. |
| Q98225898 | Evaluating the effect of reference genome divergence on the analysis of empirical RADseq datasets |
| Q35903055 | Evaluating whole transcriptome amplification for gene profiling experiments using RNA-Seq |
| Q31152040 | Evaluating within-population variability in behavior and demography for the adaptive potential of a dispersal-limited species to climate change |
| Q35839582 | Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly. |
| Q28822252 | Evidence for ecological speciation via a host shift in the holly leaf miner, Phytomyza glabricola (Diptera: Agromyzidae) |
| Q38628163 | Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth. |
| Q54634395 | Evolution of New Zealand insects: summary and prospectus for future research |
| Q46538890 | Evolutionary Endocrinology of Hormonal Rhythms: Juvenile Hormone Titer Circadian Polymorphism in Gryllus firmus |
| Q30978978 | Evolutionary consequences of climate-induced range shifts in insects. |
| Q58700833 | Evolutionary insights from comparative transcriptome and transcriptome-wide coalescence analyses in Tetrastigma hemsleyanum |
| Q100416664 | Examining the molecular mechanisms contributing to the success of an invasive species across different ecosystems |
| Q39072032 | Exploration and characterization of genes involved in the synthesis of diterpene defence secretion in nasute termite soldiers. |
| Q34489932 | Exploring Pandora's box: potential and pitfalls of low coverage genome surveys for evolutionary biology |
| Q34413161 | Exploring local immunological adaptation of two stickleback ecotypes by experimental infection and transcriptome-wide digital gene expression analysis. |
| Q34242948 | Exploring the transcriptome of Atlantic salmon (Salmo salar) skin, a major defense organ |
| Q31113634 | Finding needles in a genomic haystack: targeted capture identifies clear signatures of selection in a nonmodel plant species |
| Q53178282 | Flow cytometric chromosome sorting in plants: the next generation. |
| Q38491108 | Frogs and estivation: transcriptional insights into metabolism and cell survival in a natural model of extended muscle disuse |
| Q35527797 | From benchtop to desktop: important considerations when designing amplicon sequencing workflows |
| Q34116949 | Gene discovery in the threatened elkhorn coral: 454 sequencing of the Acropora palmata transcriptome |
| Q35210322 | Gene discovery through transcriptome sequencing for the invasive mussel Limnoperna fortunei |
| Q36382250 | Gene expression divergence and nucleotide differentiation between males of different color morphs and mating strategies in the ruff |
| Q30658207 | Gene expression under chronic heat stress in populations of the mustard hill coral (Porites astreoides) from different thermal environments |
| Q89966133 | Genetic Variation Related to High Elevation Adaptation Revealed by Common Garden Experiments in Pinus yunnanensis |
| Q38234966 | Genetic anchoring of whole-genome shotgun assemblies |
| Q50295528 | Genetic and Genomic Tools to Asssist Sugar Beet Improvement: The Value of the Crop Wild Relatives. |
| Q51601784 | Genetic mapping of the major histocompatibility complex in the zebra finch (Taeniopygia guttata). |
| Q34756089 | Genetic structure in the coral, Montastraea cavernosa: assessing genetic differentiation among and within Mesophotic reefs |
| Q55444979 | Genetic structure of six cattle populations revealed by transcriptome-wide SNPs and gene expression. |
| Q90358200 | Genome skimming is a low-cost and robust strategy to assemble complete mitochondrial genomes from ethanol preserved specimens in biodiversity studies |
| Q64989391 | Genome-wide analysis reveals four key transcription factors associated with cadmium stress in creeping bentgrass (Agrostis stolonifera L.). |
| Q61443862 | Genome-wide signatures of local adaptation among seven stoneflies species along a nationwide latitudinal gradient in Japan |
| Q36405561 | Genomewide transcriptional reprogramming in the seagrass Cymodocea nodosa under experimental ocean acidification |
| Q36100788 | Genomic Methods Take the Plunge: Recent Advances in High-Throughput Sequencing of Marine Mammals. |
| Q90080327 | Genomic and Mitochondrial Data Identify Different Species Boundaries in Aposematically Polymorphic Eniclases Net-Winged Beetles (Coleoptera: Lycidae) |
| Q57152977 | Genomic approaches for studying crop evolution |
| Q34768275 | Genomic basis of ecological niche divergence among cryptic sister species of non-biting midges |
| Q111629669 | Genomic data reveal two distinct species from the widespread alpine ginger Roscoea tibetica Batalin (Zingiberaceae) |
| Q31136664 | Genomic divergence between the migratory and stationary ecotypes of Atlantic cod. |
| Q91155442 | Genomic pedigree reconstruction identifies predictors of mating and reproductive success in an invasive vertebrate |
| Q35612030 | Genomic sequencing and microsatellite marker development for Boswellia papyrifera, an economically important but threatened tree native to dry tropical forests. |
| Q39019976 | Genomic studies on the nature of species: adaptation and speciation in Mimulus |
| Q35963643 | Genomic toolboxes for conservation biologists |
| Q35011134 | Genomics of Compositae crops: reference transcriptome assemblies and evidence of hybridization with wild relatives |
| Q58580356 | HD-Marker: a highly multiplexed and flexible approach for targeted genotyping of over 10,000 genes in a single-tube assay |
| Q35627255 | Harnessing cross-species alignment to discover SNPs and generate a draft genome sequence of a bighorn sheep (Ovis canadensis) |
| Q26771227 | Harnessing the power of RADseq for ecological and evolutionary genomics |
| Q50052646 | Hidden endemism, deep polyphyly, and repeated dispersal across the Isthmus of Tehuantepec: Diversification of the White-collared Seedeater complex (Thraupidae: Sporophila torqueola). |
| Q38759465 | High throughput mining of E-genome specific SNPs for characterizing Thinopyrum elongatum introgressions in common wheat |
| Q30388724 | High throughput sequencing of small RNAs transcriptomes in two Crassostrea oysters identifies microRNAs involved in osmotic stress response |
| Q36281387 | High-quality RNA extraction from the sea urchin Paracentrotus lividus embryos |
| Q38317528 | High-resolution melting analysis for bird sexing: a successful approach to molecular sex identification using different biological samples. |
| Q34622964 | High-utility conserved avian microsatellite markers enable parentage and population studies across a wide range of species |
| Q55511956 | Horizontal gene transfer in the acquisition of novel traits by metazoans. |
| Q26824741 | How and why should we implement genomics into conservation? |
| Q58514499 | How does sequence variability affectde novoassembly quality? |
| Q34196838 | How to infer reliable diploid genotypes from NGS or traditional sequence data: from basic probability to experimental optimization. |
| Q55514178 | IDP-denovo: de novo transcriptome assembly and isoform annotation by hybrid sequencing. |
| Q39547872 | Identification and validation of single nucleotide polymorphisms as tools to detect hybridization and population structure in freshwater stingrays. |
| Q90522202 | Identification of Genic SSRs Provide a Perspective for Studying Environmental Adaptation in the Endemic Shrub Tetraena mongolica |
| Q42608688 | Identification of SNP markers for inferring phylogeny in temperate bamboos (Poaceae: Bambusoideae) using RAD sequencing. |
| Q30894806 | Identification of Salt-Stress-Induced Genes from the RNA-Seq Data of Reaumuria trigyna Using Differential-Display Reverse Transcription PCR. |
| Q56420616 | Identification of microsatellite markers for a worldwide distributed, highly invasive ant species Tapinoma melanocephalum (Hymenoptera: Formicidae) |
| Q38368350 | Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates |
| Q39650626 | Identifying insecticide resistance genes in mosquito by combining AFLP genome scans and 454 pyrosequencing |
| Q35579962 | Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADSeq). |
| Q38827129 | Impacts of taxonomic inertia for the conservation of African ungulate diversity: an overview |
| Q37244653 | Implementing an evolutionary framework for understanding genetic relationships of phenotypically defined insect biotypes in the invasive soybean aphid (Aphis glycines) |
| Q36276973 | In Silico identification and annotation of non-coding RNAs by RNA-seq and De Novo assembly of the transcriptome of Tomato Fruits |
| Q31043319 | In silico prediction of the G-protein coupled receptors expressed during the metamorphic molt of Sagmariasus verreauxi (Crustacea: Decapoda) by mining transcriptomic data: RNA-seq to repertoire |
| Q30877130 | Incorporating evolutionary processes into population viability models. |
| Q36091452 | Increasing the power of genome wide association studies in natural populations using repeated measures - evaluation and implementation |
| Q30455201 | Inferring the evolutionary histories of divergences in Hylobates and Nomascus gibbons through multilocus sequence data |
| Q57020011 | Influence of past agricultural fragmentation to the genetic structure of Juniperus oxycedrus in a Mediterranean landscape |
| Q92819175 | Integrated genome-wide investigations of the housefly, a global vector of diseases reveal unique dispersal patterns and bacterial communities across farms |
| Q31145276 | Integrating landscape genomics and spatially explicit approaches to detect loci under selection in clinal populations |
| Q34783993 | Integrating phylogenetics, phylogeography and population genetics through genomes and evolutionary theory |
| Q33608816 | Inter- and intra-species variation in genome-wide gene expression of Drosophila in response to parasitoid wasp attack |
| Q90041216 | Interspecific Genetic Differences and Historical Demography in South American Arowanas (Osteoglossiformes, Osteoglossidae, Osteoglossum) |
| Q37244643 | Investigating the genetics of Bti resistance using mRNA tag sequencing: application on laboratory strains and natural populations of the dengue vector Aedes aegypti |
| Q42747619 | Isolation and Characterization of Microsatellite DNA Markers in the Deep-Sea Amphipod Paralicella tenuipes by Illumina MiSeq Sequencing |
| Q46157011 | Isolation and characterization of 14 tetranucleotide microsatellite loci for the cannonball jellyfish (Stomolophus sp.) by next generation sequencing |
| Q30404831 | Isolation and characterization of microsatellite markers useful for exploring introgression among species in the diverse New Zealand cicada genus Kikihia |
| Q37707249 | Large-scale development of gene-associated single-nucleotide polymorphism markers for molluscan population genomic, comparative genomic, and genome-wide association studies |
| Q36162534 | Leaf Transcriptome Sequencing for Identifying Genic-SSR Markers and SNP Heterozygosity in Crossbred Mango Variety 'Amrapali' (Mangifera indica L.). |
| Q55000091 | Loci under selection and markers associated with host plant and host-related strains shape the genetic structure of Brazilian populations of Spodoptera frugiperda (Lepidoptera, Noctuidae). |
| Q90458341 | Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing |
| Q57585691 | Making evolutionary history count: biodiversity planning for coral reef fishes and the conservation of evolutionary processes |
| Q55454694 | Mapping Portuguese Natura 2000 sites in risk of biodiversity change caused by atmospheric nitrogen pollution. |
| Q35865112 | Massive sequencing of Ulmus minor's transcriptome provides new molecular tools for a genus under the constant threat of Dutch elm disease. |
| Q46260554 | Microhaplotypes provide increased power from short-read DNA sequences for relationship inference |
| Q57143643 | Microsatellite loci obtained by next generation sequencing on the sablefish (Anoplopoma fimbria) |
| Q46977796 | Microsatellite markers from the Ion Torrent: a multi-species contrast to 454 shotgun sequencing. |
| Q26771472 | Microsatellites in Pursuit of Microbial Genome Evolution |
| Q50042171 | Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants. |
| Q21090798 | Mitochondrial phylogenomics of modern and ancient equids |
| Q28595471 | Moderate Genetic Diversity and Genetic Differentiation in the Relict Tree Liquidambar formosana Hance Revealed by Genic Simple Sequence Repeat Markers |
| Q96304617 | Modulated Expression and Activities of Ruditapes philippinarum Enzymes After Oxidative Stress Induced by Aerial Exposure and Reimmersion |
| Q35980092 | Molecular Inversion Probes for targeted resequencing in non-model organisms |
| Q57428125 | Molecular approaches for biosurveillance of the cucurbit downy mildew pathogen, Pseudoperonospora cubensis |
| Q86483631 | Molecular basis of chronic lymphocytic leukemia diagnosis and prognosis |
| Q38883629 | Molecular divergence in tropical tree populations occupying environmental mosaics |
| Q91673375 | Molecular evolution in immune genes across the avian tree of life |
| Q38495290 | Molecular evolutionary and population genomic analysis of the nine-spined stickleback using a modified restriction-site-associated DNA tag approach |
| Q47550127 | Molecular genetics and genomics generate new insights into invertebrate pest invasions |
| Q48220869 | Molecular mechanisms of adaptation and speciation: why do we need an integrative approach? |
| Q58000605 | Molecular species identification and population genetics of chondrichthyans in South Africa: current challenges, priorities and progress |
| Q35080169 | Morphological clines and weak drift along an urbanization gradient in the butterfly, Pieris rapae |
| Q97533499 | Multi-level patterns of genetic structure and isolation by distance in the widespread plant Mimulus guttatus |
| Q35988806 | Multi-taxa integrated landscape genetics for zoonotic infectious diseases: deciphering variables influencing disease emergence |
| Q57802394 | Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families |
| Q36555600 | Multi-tissue transcriptomics for construction of a comprehensive gene resource for the terrestrial snail Theba pisana |
| Q34354808 | Multi-tissue transcriptomics of the black widow spider reveals expansions, co-options, and functional processes of the silk gland gene toolkit |
| Q101440631 | Multilocus phylogeny and a new classification for African, Asian and Indian supple and writhing skinks (Scincidae: Lygosominae) |
| Q39777081 | Multiplexed shotgun sequencing reveals congruent three-genome phylogenetic signals for four botanical sections of the flax genus Linum. |
| Q39217031 | Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq |
| Q91259709 | Naturally clonal vertebrates are an untapped resource in ecology and evolution research |
| Q34698830 | New SNPs for population genetic analysis reveal possible cryptic speciation of eastern Australian sea mullet (Mugil cephalus). |
| Q35753324 | New perspectives on the evolution of plant mating systems |
| Q37587239 | Next generation sequencing (NGS) in glucose-6-phosphate dehydrogenase (G6PD) deficiency studies |
| Q41385592 | Next-generation approaches to advancing eco-immunogenomic research in critically endangered primates |
| Q45215012 | Next-generation phylogenetics takes root |
| Q110697308 | Next-generation phylogeography of the banded newts (Ommatotriton): A phylogenetic hypothesis for three ancient species with geographically restricted interspecific gene flow and deep intraspecific genetic structure |
| Q34217820 | Next-generation phylogeography: a targeted approach for multilocus sequencing of non-model organisms |
| Q35557965 | Next-generation transcriptome sequencing, SNP discovery and validation in four market classes of peanut, Arachis hypogaea L. |
| Q58107173 | Non-invasive genotyping with a massively parallel sequencing panel for the detection of SNPs in HPA-axis genes |
| Q34777967 | Oak genomics takes off … and enters the ecological genomics era. |
| Q28069974 | Odonata (dragonflies and damselflies) as a bridge between ecology and evolutionary genomics |
| Q34089524 | Optimization of preservation and storage time of sponge tissues to obtain quality mRNA for next-generation sequencing. |
| Q36086502 | Origin of a cryptic lineage in a threatened reptile through isolation and historical hybridization |
| Q34842155 | Parallel tagged amplicon sequencing of transcriptome-based genetic markers for Triturus newts with the Ion Torrent next-generation sequencing platform |
| Q44459938 | Parallel tagged amplicon sequencing reveals major lineages and phylogenetic structure in the North American tiger salamander (Ambystoma tigrinum) species complex |
| Q36958141 | Patterns of Genome-Wide Variation in Glossina fuscipes fuscipes Tsetse Flies from Uganda |
| Q36321850 | Phylogenomic Insights into Mouse Evolution Using a Pseudoreference Approach |
| Q34528539 | Phylogeographical patterns shed light on evolutionary process in South America. |
| Q56156844 | Phylogeography of the Common Pheasant Phasianus colchicus |
| Q34287924 | Pleistocene speciation with and without gene flow in Euphaea damselflies of subtropical and tropical East Asian islands |
| Q46280578 | Population Genomic Analysis of a Pitviper Reveals Microevolutionary Forces Underlying Venom Chemistry |
| Q34757010 | Population genomic footprints of selection and associations with climate in natural populations of Arabidopsis halleri from the Alps |
| Q58577938 | Population genomics of parallel evolution in gene expression and gene sequence during ecological adaptation |
| Q56333111 | Population genomics of the raccoon dog (Nyctereutes procyonoides) in Denmark: insights into invasion history and population development |
| Q38611950 | Population transcriptomic characterization of the genetic and expression variation of a candidate progenitor of Miscanthus energy crops |
| Q30743735 | Prevention, diagnosis and treatment of high-throughput sequencing data pathologies |
| Q34690154 | Principles of transcriptome analysis and gene expression quantification: an RNA-seq tutorial |
| Q90038146 | Proteomics and pulse azidohomoalanine labeling of newly synthesized proteins: what are the potential applications? |
| Q37978004 | Proteomics in evolutionary ecology: linking the genotype with the phenotype |
| Q57173967 | RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding |
| Q43090247 | RAD-Seq derived markers flank the shell colour and banding loci of the Cepaea nemoralis supergene |
| Q61808061 | RNA Sequencing Characterizes Transcriptomes Differences in Cold Response Between Northern and Southern and Highlight Adaptations Associated With Northward Expansion |
| Q33941520 | RNA-Seq for gene identification and transcript profiling of three Stevia rebaudiana genotypes |
| Q34264612 | RNA-Seq identifies SNP markers for growth traits in rainbow trout |
| Q34065123 | RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus |
| Q36258819 | RNA-Sequencing Reveals Biological Networks during Table Grapevine ('Fujiminori') Fruit Development |
| Q59280342 | RNA-seq analysis in forest tree species: bioinformatic problems and solutions |
| Q30641144 | RNA-seq analysis reveals extensive transcriptional plasticity to temperature stress in a freshwater fish species |
| Q36097896 | RNA-sequencing of the sturgeon Acipenser baeri provides insights into expression dynamics of morphogenic differentiation and developmental regulatory genes in early versus late developmental stages |
| Q41834168 | Rapid speciation with gene flow following the formation of Mt. Etna. |
| Q35680455 | Reptilian Transcriptomes v2.0: An Extensive Resource for Sauropsida Genomics and Transcriptomics |
| Q33817188 | Resequencing and comparison of whole mitochondrial genome to gain insight into the evolutionary status of the Shennongjia golden snub-nosed monkey (SNJ R. roxellana). |
| Q42658710 | Resequencing studies of nonmodel organisms using closely related reference genomes: optimal experimental designs and bioinformatics approaches for population genomics. |
| Q91652766 | Resolving evolutionary relationships among six closely related taxa of the horseshoe bats (Rhinolophus) with targeted resequencing data |
| Q34331270 | Response to artificial drying until drought-induced death in different elevation populations of a high-mountain plant. |
| Q36116109 | Restriction site associated DNA (RAD) for de novo sequencing and marker discovery in sugarcane borer, Diatraea saccharalis Fab. (Lepidoptera: Crambidae). |
| Q36168220 | Revealing crosstalk of plant and fungi in the symbiotic roots of sewage-cleaning Eichhornia crassipes using direct de novo metatranscriptomic analysis |
| Q35940317 | Root-associated fungi of Vaccinium carlesii in subtropical forests of China: intra- and inter-annual variability and impacts of human disturbances |
| Q34540774 | SNP design from 454 sequencing of Podosphaera plantaginis transcriptome reveals a genetically diverse pathogen metapopulation with high levels of mixed-genotype infection |
| Q34540539 | SNP detection from de novo transcriptome sequencing in the bivalve Macoma balthica: marker development for evolutionary studies |
| Q30664273 | SNP development from RNA-seq data in a nonmodel fish: how many individuals are needed for accurate allele frequency prediction? |
| Q42658782 | SNP discovery in wild and domesticated populations of blue catfish, Ictalurus furcatus, using genotyping-by-sequencing and subsequent SNP validation |
| Q38493570 | SNP discovery using Paired-End RAD-tag sequencing on pooled genomic DNA of Sisymbrium austriacum (Brassicaceae). |
| Q34513036 | SNP genotyping for detecting the 'rare allele phenomenon' in hybrid zones. |
| Q30668481 | SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data |
| Q50115647 | SeaBase: a multispecies transcriptomic resource and platform for gene network inference. |
| Q51557749 | Seasonal trends in the biomass and structure of bryophyte-associated fungal communities explored by 454 pyrosequencing. |
| Q91665538 | Selection of reference genes for flowering pathway analysis in the masting plants, Celmisia lyallii and Chionochloa pallens, under variable environmental conditions |
| Q90091418 | Shared transcriptional responses to con- and heterospecific behavioral antagonists in a wild songbird |
| Q34031038 | Short reads, circular genome: skimming solid sequence to construct the bighorn sheep mitochondrial genome. |
| Q38852988 | Signals of selection in conditionally expressed genes in the diversification of three horned beetle species. |
| Q59289673 | Strategies to modulate the intestinal microbiota of Tilapia (Oreochromis sp.) in aquaculture: a review |
| Q35575709 | Sun skink landscape genomics: assessing the roles of micro-evolutionary processes in shaping genetic and phenotypic diversity across a heterogeneous and fragmented landscape |
| Q35225042 | Systems biology of tissue-specific response to Anaplasma phagocytophilum reveals differentiated apoptosis in the tick vector Ixodes scapularis. |
| Q36771745 | Targeted capture in evolutionary and ecological genomics. |
| Q34512975 | Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture |
| Q26740119 | Telling plant species apart with DNA: from barcodes to genomes |
| Q38325729 | Ten years of transcriptomics in wild populations: what have we learned about their ecology and evolution? |
| Q33943740 | The Littorina sequence database (LSD)--an online resource for genomic data |
| Q28602365 | The aggregate site frequency spectrum for comparative population genomic inference |
| Q35595754 | The devil is in the details: genetic variation in introduced populations and its contributions to invasion |
| Q34616664 | The easy road to genome-wide medium density SNP screening in a non-model species: development and application of a 10 K SNP-chip for the house sparrow (Passer domesticus). |
| Q35570856 | The environmental genomics of metazoan thermal adaptation. |
| Q35185220 | The first set of expressed sequence tags (EST) from the medicinal mushroom Agaricus subrufescens delivers resource for gene discovery and marker development |
| Q34225612 | The future of environmental DNA in ecology |
| Q94460459 | The genetic basis of hybrid male sterility in sympatric Primulina species |
| Q41408546 | The lemur revolution starts now: the genomic coming of age for a non-model organism |
| Q45344847 | The metal transporter PgIREG1 from the hyperaccumulator Psychotria gabriellae is a candidate gene for nickel tolerance and accumulation |
| Q59214671 | The next generation ofaction ecology: novel approaches towards global ecological research |
| Q38130689 | The number of markers and samples needed for detecting bottlenecks under realistic scenarios, with and without recovery: a simulation-based study |
| Q38491087 | The plover neurotranscriptome assembly: transcriptomic analysis in an ecological model species without a reference genome. |
| Q30945151 | The population genomic signature of environmental selection in the widespread insect-pollinated tree species Frangula alnus at different geographical scales |
| Q38693313 | The power and promise of RNA-seq in ecology and evolution |
| Q30436190 | The promise of genomics in the study of plant-pollinator interactions. |
| Q30277187 | The quest to resolve recent radiations: Plastid phylogenomics of extinct and endangered Hawaiian endemic mints (Lamiaceae). |
| Q35046774 | The relevance of time series in molecular ecology and conservation biology |
| Q35007819 | The repetitive component of the sunflower genome as shown by different procedures for assembling next generation sequencing reads |
| Q39421193 | The role of local ecology during hybridization at the initial stages of ecological speciation in a marine snail. |
| Q35163425 | The use of noninvasive and minimally invasive methods in endocrinology for threatened mammalian species conservation |
| Q32175916 | The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics |
| Q91062938 | Tissue-specific expression profiles and positive selection analysis in the tree swallow (Tachycineta bicolor) using a de novo transcriptome assembly |
| Q64247913 | Towards population genomics in non-model species with large genomes: a case study of the marine zooplankton |
| Q30676314 | Tracing horizontal Wolbachia movements among bees (Anthophila): a combined approach using multilocus sequence typing data and host phylogeny |
| Q89095017 | Tracing the evolutionary lineage of pattern recognition receptor homologues in vertebrates: An insight into reptilian immunity via de novo sequencing of the wall lizard splenic transcriptome |
| Q64072504 | Transcriptional Profile Corroborates that Mutant Plays likely Role in Premature Leaf Senescence of Rice ( L.) |
| Q34558435 | Transcriptional dynamics of a conserved gene expression network associated with craniofacial divergence in Arctic charr. |
| Q30385659 | Transcriptome Analysis for Identification of Genes Related to Gonad Differentiation, Growth, Immune Response and Marker Discovery in The Turbot (Scophthalmus maximus) |
| Q33642440 | Transcriptome analyses and differential gene expression in a non-model fish species with alternative mating tactics. |
| Q92003124 | Transcriptome analysis and codominant markers development in caper, a drought tolerant orphan crop with medicinal value |
| Q39248353 | Transcriptome analysis and gene expression atlas for Panicum hallii var. filipes, a diploid model for biofuel research |
| Q38463560 | Transcriptome analysis of predator- and prey-induced phenotypic plasticity in the Hokkaido salamander (Hynobius retardatus). |
| Q35974591 | Transcriptome analysis of the painted lady butterfly, Vanessa cardui during wing color pattern development |
| Q92942274 | Transcriptome analysis reveals differential immune related genes expression in bovine viral diarrhea virus-2 infected goat peripheral blood mononuclear cells (PBMCs) |
| Q38469511 | Transcriptome analysis reveals diversified adaptation of Stipa purpurea along a drought gradient on the Tibetan Plateau |
| Q34322301 | Transcriptome analysis reveals novel patterning and pigmentation genes underlying Heliconius butterfly wing pattern variation. |
| Q92054709 | Transcriptome analysis reveals plasticity in gene regulation due to environmental cues in Primula sikkimensis, a high altitude plant species |
| Q34476078 | Transcriptome de novo assembly from next-generation sequencing and comparative analyses in the hexaploid salt marsh species Spartina maritima and Spartina alterniflora (Poaceae). |
| Q30392727 | Transcriptome profiling analysis on whole bodies of microbial challenged Eriocheir sinensis larvae for immune gene identification and SNP development |
| Q93242349 | Transcriptome profiling and histology changes in juvenile blunt snout bream (Megalobrama amblycephala) liver tissue in response to acute thermal stress |
| Q30355739 | Transcriptome profiling of ontogeny in the acridid grasshopper Chorthippus biguttulus. |
| Q39269797 | Transcriptome resources for the perennial sunflower Helianthus maximiliani obtained from ecologically divergent populations |
| Q34799487 | Transcriptome resources for the white-footed mouse (Peromyscus leucopus): new genomic tools for investigating ecologically divergent urban and rural populations |
| Q28655193 | Transcriptome sequencing and analysis of leaf tissue of Avicennia marina using the Illumina platform |
| Q35626809 | Transcriptome sequencing and analysis of rubber tree (Hevea brasiliensis Muell.) to discover putative genes associated with tapping panel dryness (TPD) |
| Q35932806 | Transcriptome sequencing of Crucihimalaya himalaica (Brassicaceae) reveals how Arabidopsis close relative adapt to the Qinghai-Tibet Plateau |
| Q36037476 | Transcriptome sequencing of black grouse (Tetrao tetrix) for immune gene discovery and microsatellite development |
| Q21266640 | Transcriptome sequencing of two wild barley (Hordeum spontaneum L.) ecotypes differentially adapted to drought stress reveals ecotype-specific transcripts |
| Q40163919 | Transcriptome sequencing revealed the genes and pathways involved in salinity stress of Chinese mitten crab, Eriocheir sinensis |
| Q35676446 | Transcriptome sequencing reveals both neutral and adaptive genome dynamics in a marine invader |
| Q60915738 | Transcriptome-wide mining, characterization, and development of microsatellite markers in Lychnis kiusiana (Caryophyllaceae) |
| Q61448166 | Transcriptomic Analysis Reveals Insights on Male Infertility in Under Chronic Thermal Stress |
| Q37248221 | Transcriptomic Analysis of Eucryptorrhynchus chinensis (Coleoptera: Curculionidae) Using 454 Pyrosequencing Technology |
| Q36520134 | Transcriptomic Analysis of Grapevine (cv. Summer Black) Leaf, Using the Illumina Platform |
| Q28686915 | Transcriptomic analysis of a tertiary relict plant, extreme xerophyte Reaumuria soongorica to identify genes related to drought adaptation |
| Q35107427 | Transcriptomic profiling of differential responses to drought in two freshwater mussel species, the giant floater Pyganodon grandis and the pondhorn Uniomerus tetralasmus |
| Q57259760 | Transformational tools for next-generation plant ecology: manipulation of gene expression for the functional analysis of genes |
| Q35547265 | Transposable elements as agents of rapid adaptation may explain the genetic paradox of invasive species |
| Q35055929 | Two Rumex species from contrasting hydrological niches regulate flooding tolerance through distinct mechanisms. |
| Q51167361 | Two decades of Molecular Ecology: where are we and where are we heading? |
| Q111629852 | Two species of the Rhodiola yunnanensis species complex distributed around the Sichuan Basin of China: Speciation in a ring? |
| Q58601401 | Uncovering vector, parasite, blood meal and microbiome patterns from mixed-DNA specimens of the Chagas disease vector Triatoma dimidiata |
| Q90311980 | Use of DNA Markers for Grape Phylloxera Population and Evolutionary Genetics: From RAPDs to SSRs and Beyond |
| Q28601584 | Use of RAD sequencing for delimiting species |
| Q45261205 | Using Illumina next generation sequencing technologies to sequence multigene families in de novo species |
| Q92646789 | Utilizing field collected insects for next generation sequencing: Effects of sampling, storage, and DNA extraction methods |
| Q58588588 | Variation and diversification of the microbiome of Schlechtendalia chinensis on two alternate host plants |
| Q58416590 | Variation in Reproductive Success Across Captive Populations: Methodological Differences, Potential Biases and Opportunities |
| Q36903015 | Variation in fungal microbiome (mycobiome) and aflatoxins during simulated storage of in-shell peanuts and peanut kernels |
| Q60045095 | Virus-mediated export of chromosomal DNA in plants |
| Q35067063 | What can livestock breeders learn from conservation genetics and vice versa? |
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