Linking isoprenoidal GDGT membrane lipid distributions with gene abundances of ammonia-oxidizing Thaumarchaeota and uncultured crenarchaeotal groups in the water column of a tropical lake (Lake Challa, East Africa).

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Linking isoprenoidal GDGT membrane lipid distributions with gene abundances of ammonia-oxidizing Thaumarchaeota and uncultured crenarchaeotal groups in the water column of a tropical lake (Lake Challa, East Africa). is …
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scholarly articleQ13442814

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P356DOI10.1111/1462-2920.12118
P698PubMed publication ID23560451

P50authorJaap Sinninghe DamstéQ15876790
Laura VillanuevaQ42640926
Dirk VerschurenQ55232481
P2093author name stringJohan W H Weijers
Laura K Buckles
P2860cites workPathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine CrenarchaeotaQ21563616
Environmental Diversity of Bacteria and ArchaeaQ22066163
Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaeaQ22066310
Distribution of membrane lipids of planktonic Crenarchaeota in the Arabian SeaQ24536347
Archaea in coastal marine environmentsQ24564723
Diversity, physiology, and niche differentiation of ammonia-oxidizing archaeaQ26861276
Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids of group I.1a and I.1b thaumarchaeota in soilQ28727505
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sedimentsQ28727615
Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zoneQ28742300
Core and intact polar glycerol dibiphytanyl glycerol tetraether lipids of ammonia-oxidizing archaea enriched from marine and estuarine sedimentsQ28743103
Fossilized glycolipids reveal past oceanic N2 fixation by heterocystous cyanobacteriaQ28748315
In situ production of crenarchaeol in two california hot springsQ28752374
Intact membrane lipids of "Candidatus Nitrosopumilus maritimus," a cultivated representative of the cosmopolitan mesophilic group I CrenarchaeotaQ28755113
Heterotrophic Archaea dominate sedimentary subsurface ecosystems off PeruQ28768174
Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean MarginQ28768264
Membrane lipid patterns typify distinct anaerobic methanotrophic consortiaQ28770156
ARB: a software environment for sequence dataQ29547354
The SILVA ribosomal RNA gene database project: improved data processing and web-based toolsQ29547623
Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the ThaumarchaeotaQ29618150
Archaeal diversity in waters from deep South African gold minesQ30769432
Tetraether-linked membrane monolayers in Ferroplasma spp: a key to survival in acid.Q31095699
Archaea predominate among ammonia-oxidizing prokaryotes in soilsQ33254300
A hotspot for cold crenarchaeota in the neuston of high mountain lakesQ33316171
Proteomic analysis of secreted membrane vesicles of archaeal Sulfolobus species reveals the presence of endosome sorting complex componentsQ33381218
Vertical structure of archaeal communities and the distribution of ammonia monooxygenase A gene variants in two meromictic High Arctic lakesQ33407686
Analytical methodology for TEX86 paleothermometry by high-performance liquid chromatography/atmospheric pressure chemical ionization-mass spectrometryQ33436695
Detection of microbial biomass by intact polar membrane lipid analysis in the water column and surface sediments of the Black Sea.Q33485501
Half-precessional dynamics of monsoon rainfall near the East African EquatorQ33517090
Vertical distribution of ammonia-oxidizing crenarchaeota and methanogens in the epipelagic waters of Lake Kivu (Rwanda-Democratic Republic of the Congo).Q33676975
Novel primers for 16S rRNA-based archaeal community analyses in environmental samplesQ33715867
Abundances of crenarchaeal amoA genes and transcripts in the Pacific OceanQ33760140
Seasonal changes of freshwater ammonia-oxidizing archaeal assemblages and nitrogen species in oligotrophic alpine lakesQ33794748
Active bacteria and archaea cells fixing bicarbonate in the dark along the water column of a stratified eutrophic lagoonQ33881475
Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis.Q33986557
Significant contribution of Archaea to extant biomass in marine subsurface sedimentsQ34012871
Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum ThaumarchaeotaQ34022981
Isolation of a hyperthermophilic archaeum predicted by in situ RNA analysis.Q34057867
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean.Q34078488
amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regionsQ34091751
Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeotaQ34153045
Vertical segregation and phylogenetic characterization of ammonia-oxidizing Archaea in a deep oligotrophic lakeQ34229066
Lipids of Thermococcus hydrothermalis, an archaea isolated from a deep-sea hydrothermal ventQ34465634
Correlation of Polar Lipid Composition with 16S rRNA Phylogeny in Methanogens. Further Analysis of Lipid Component PartsQ34533322
Putative ammonia-oxidizing Crenarchaeota in suboxic waters of the Black Sea: a basin-wide ecological study using 16S ribosomal and functional genes and membrane lipidsQ34577639
Thermophilic temperature optimum for crenarchaeol synthesis and its implication for archaeal evolutionQ34720739
Archaeal nitrification in the oceanQ34944414
Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk.Q34998839
Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea)Q35092558
Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soilQ35229294
Environmental factors shaping the ecological niches of ammonia-oxidizing archaeaQ37488407
Nonmarine crenarchaeol in Nevada hot springs.Q37552909
The Thaumarchaeota: an emerging view of their phylogeny and ecophysiologyQ37872482
Recovery and phylogenetic analysis of archaeal rRNA sequences from continental shelf sedimentsQ38552261
Reduced interannual rainfall variability in East Africa during the last ice age.Q39600452
Phylogenetic diversity of archaea and bacteria in the anoxic zone of a meromictic lake (Lake Pavin, France).Q41829281
Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeolQ43023988
Phospholipid etherlipid and phospholipid fatty acid fingerprints in selected euryarchaeotal monocultures for taxonomic profilingQ44071130
High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual studyQ44250403
Water table related variations in the abundance of intact archaeal membrane lipids in a Swedish peat bog.Q45080489
Application of molecular techniques to evaluate the methanogenic archaea and anaerobic bacteria in the presence of oxygen with different COD:sulfate ratios in a UASB reactor.Q46478165
A nested PCR approach for improved recovery of archaeal 16S rRNA gene fragments from freshwater samples.Q48068747
Seasonal and vertical distribution of putative ammonia-oxidizing thaumarchaeotal communities in an oligotrophic lake.Q51550306
Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia.Q53126823
Methane Index: A tetraether archaeal lipid biomarker indicator for detecting the instability of marine gas hydratesQ56535765
The organic geochemistry of glycerol dialkyl glycerol tetraether lipids: A reviewQ56680920
Intact polar lipids of anaerobic methanotrophic archaea and associated bacteriaQ57092676
Spatial distribution of Bacteria and Archaea and amoA gene copy numbers throughout the water column of the Eastern Mediterranean SeaQ58002184
Archaeal lipids in Mediterranean cold seeps: molecular proxies for anaerobic methane oxidationQ58098239
Deep sub-seafloor prokaryotes stimulated at interfaces over geological timeQ59056952
Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea oxygen minimum zone. Part II: Selective preservation and degradation in sediments and consequences for the TEX86Q59139316
Seasonal changes in glycerol dialkyl glycerol tetraether concentrations and fluxes in a perialpine lake: Implications for the use of the TEX86 and BIT proxiesQ59139335
Tetraether membrane lipid distributions in water-column particulate matter and sediments: a study of 47 European lakes along a north–south transectQ59139371
P433issue9
P921main subjectlakeQ23397
East AfricaQ27407
P304page(s)2445-2462
P577publication date2013-04-08
P1433published inEnvironmental MicrobiologyQ15752447
P1476titleLinking isoprenoidal GDGT membrane lipid distributions with gene abundances of ammonia-oxidizing Thaumarchaeota and uncultured crenarchaeotal groups in the water column of a tropical lake (Lake Challa, East Africa).
P478volume15

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cites work (P2860)
Q89356317"Candidatus Nitrosotenuis aquarius," an Ammonia-Oxidizing Archaeon from a Freshwater Aquarium Biofilter
Q99418573Bridging the membrane lipid divide: bacteria of the FCB group superphylum have the potential to synthesize archaeal ether lipids
Q50330157Cultivation and Genomic Analysis of “Candidatus Nitrosocaldus islandicus,” an Obligately Thermophilic, Ammonia-Oxidizing Thaumarchaeon from a Hot Spring Biofilm in Graendalur Valley, Iceland.
Q41236654Diversity of Miscellaneous Crenarchaeotic Group archaea in freshwater karstic lakes and their segregation between planktonic and sediment habitats
Q28661967Impacts of temperature and pH on the distribution of archaeal lipids in Yunnan hot springs, China
Q36756490Insights in the ecology and evolutionary history of the Miscellaneous Crenarchaeotic Group lineage
Q28604274Sedimentary archaeal amoA gene abundance reflects historic nutrient level and salinity fluctuations in Qinghai Lake, Tibetan Plateau
Q58097829The Response of Archaeal Tetraether Membrane Lipids in Surface Soils to Temperature: A Potential Paleothermometer in Paleosols
Q35429967The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group
Q35006308Tropical aquatic Archaea show environment-specific community composition
Q28661681amoA-encoding archaea and thaumarchaeol in the lakes on the northeastern Qinghai-Tibetan Plateau, China

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