What's in the genome of a filamentous fungus? Analysis of the Neurospora genome sequence

scientific article

What's in the genome of a filamentous fungus? Analysis of the Neurospora genome sequence is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKG293
P932PMC publication ID152809
P698PubMed publication ID12655011
P5875ResearchGate publication ID277399917

P50authorFrank KempkenQ41852147
Jörg D HoheiselQ57067730
P2093author name stringGertrud Mannhaupt
Corinna Montrone
Josef Maier
Berthold Fartmann
Gerald Nyakatura
Dirk Haase
H Werner Mewes
Ulrich Schulte
Verena Aign
P2860cites workThe genome sequence of Schizosaccharomyces pombeQ21972841
Analysis of the genome sequence of the flowering plant Arabidopsis thalianaQ22122387
The Pseudomonas aeruginosa rhlG gene encodes an NADPH-dependent beta-ketoacyl reductase which is specifically involved in rhamnolipid synthesisQ24521477
Genetic Control of Biochemical Reactions in NeurosporaQ24522198
The Pfam protein families databaseQ27860470
Prediction of complete gene structures in human genomic DNAQ27860780
Life with 6000 genesQ27860877
The InterPro database, an integrated documentation resource for protein families, domains and functional sitesQ28140863
Reversal in the direction of movement of a molecular motorQ28248501
Phenol hydroxylase from Trichosporon cutaneum: gene cloning, sequence analysis, and functional expression in Escherichia coliQ28317243
Molecular evidence for an ancient duplication of the entire yeast genomeQ29547472
MIPS: a database for genomes and protein sequencesQ29614501
Ab initio gene finding in Drosophila genomic DNAQ29617909
The PROSITE database, its status in 2002Q29618301
Short-chain dehydrogenases/reductases (SDR)Q29620095
Disruption of phacA, an Aspergillus nidulans gene encoding a novel cytochrome P450 monooxygenase catalyzing phenylacetate 2-hydroxylation, results in penicillin overproductionQ30577313
IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matricesQ30648351
Cloning and characterization of a cyclic peptide synthetase gene from Alternaria alternata apple pathotype whose product is involved in AM-toxin synthesis and pathogenicityQ30655753
The Neurospora crassa genome: cosmid libraries sorted by chromosome.Q30657300
Hybridization-based mapping of Neurospora crassa linkage groups II and VQ30657319
Purification and properties of hydroquinone hydroxylase, a FAD-dependent monooxygenase involved in the catabolism of 4-hydroxybenzoate in Candida parapsilosis CBS604.Q31571906
Molecular cloning and genetic analysis of an indole-diterpene gene cluster from Penicillium paxilliQ31907009
Gibberellin biosynthetic pathway in Gibberella fujikuroi: evidence for a gene clusterQ31920213
Structure of the chromosome VII centromere region in Neurospora crassa: degenerate transposons and simple repeatsQ32036956
Fot1, a new family of fungal transposable elementsQ33188815
Characterization of telomere DNA from Neurospora crassaQ33498352
A developmentally regulated gene cluster involved in conidial pigment biosynthesis in Aspergillus fumigatus.Q33638317
Beta-lactam antibiotic biosynthetic genes have been conserved in clusters in prokaryotes and eukaryotes.Q33744608
Interconnected feedback loops in the Neurospora circadian systemQ33908510
Premeiotic change of nucleolus organizer size in NeurosporaQ33955586
Correlation of the physical and genetic maps of the centromeric region of the right arm of linkage group III of Neurospora crassaQ33962750
The Neurospora transposon Tad is sensitive to repeat-induced point mutation (RIP).Q33963834
Functional and evolutionary relationships among diverse oxygenasesQ33972461
PhaC and PhaR are required for polyhydroxyalkanoic acid synthase activity in Bacillus megateriumQ33996517
Cloning, characterization, and transcription of three laccase genes from Gaeumannomyces graminis var. tritici, the take-all fungusQ34050185
Bcmfs1, a novel major facilitator superfamily transporter from Botrytis cinerea, provides tolerance towards the natural toxic compounds camptothecin and cercosporin and towards fungicidesQ34095609
Neurospora at the millenniumQ34198355
Fungal genomics and pathogenicityQ34289019
Homology-dependent gene silencing mechanisms in fungiQ34360793
The genome and genes of Neurospora crassaQ34438521
Large scale analysis of sequences from Neurospora crassaQ34495076
A methylated Neurospora 5S rRNA pseudogene contains a transposable element inactivated by repeat-induced point mutationQ34604927
The Neurospora crassa carotenoid biosynthetic gene (albino 3) reveals highly conserved regions among prenyltransferasesQ34747755
Isolation and characterization of the tyrosinase gene from Neurospora crassaQ35310650
Aspergillus nidulans verA is required for production of the mycotoxin sterigmatocystinQ36055364
Arrangement of the genes coding for ribosomal ribonucleic acids in Neurospora crassaQ36338564
Characterization of two allelic forms of Neurospora crassa laccase. Amino- and carboxyl-terminal processing of a precursorQ36420695
Isolation and characterisation of genes for sulphate activation and reduction in Aspergillus nidulans: implications for evolution of an allosteric control region by gene duplicationQ36706274
Gene cluster involved in melanin biosynthesis of the filamentous fungus Alternaria alternataQ36771790
An electrophoretic karyotype of Neurospora crassaQ36786166
Twenty-five coregulated transcripts define a sterigmatocystin gene cluster in Aspergillus nidulansQ37716071
Seventy-five percent accuracy in protein secondary structure predictionQ38558729
Melanin biosynthesis in Cryptococcus neoformansQ39565124
The Cytogenetics of NeurosporaQ39628697
The use of duplication-generating rearrangements for studying heterokaryon incompatibility genes in NeurosporaQ39734219
Comparative mapping of aflatoxin pathway gene clusters in Aspergillus parasiticus and Aspergillus flavus.Q39797865
Genetic and epigenetic inactivation of repetitive sequences in Neurospora crassa: RIP, DNA methylation, and quellingQ40378645
The P450 superfamily: update on new sequences, gene mapping, accession numbers, early trivial names of enzymes, and nomenclatureQ40484461
Genetics and biochemistry of phenol degradation by Pseudomonas sp. CF600.Q40535888
Molecular dissection of fungal phytopathogenicityQ40614871
Tyrosinase and related proteins in mammalian pigmentationQ40970477
Transposons in place of telomeric repeats at a Drosophila telomereQ42610468
The fungal acl1 and acl2 genes encode two polypeptides with homology to the N- and C-terminal parts of the animal ATP citrate lyase polypeptideQ42625512
A polyketide synthase is required for fungal virulence and production of the polyketide T-toxinQ42645834
A DEAD-box protein functions as an ATP-dependent RNA chaperone in group I intron splicingQ42679215
Characterization of four clustered and coregulated genes associated with fumonisin biosynthesis in Fusarium verticillioidesQ43811975
A carotenoid biosynthesis gene cluster in Fusarium fujikuroi: the genes carB and carRA.Q44098114
The cefT gene of Acremonium chrysogenum C10 encodes a putative multidrug efflux pump protein that significantly increases cephalosporin C productionQ44098127
Functional and structural genomics using PEDANT.Q44495629
Timeline: Neurospora: a model of model microbes.Q45985575
Large-scale comparison of fungal sequence information: mechanisms of innovation in Neurospora crassa and gene loss in Saccharomyces cerevisiaeQ47676932
DAB1: a degenerate retrotransposon-like element from Neurospora crassaQ47904204
The preprotein translocation channel of the outer membrane of mitochondriaQ47945539
Cloning and sequence analysis of an intron-containing domain from a peptide synthetase-encoding gene of the entomopathogenic fungus Metarhizium anisopliaeQ48060038
bli-4, a gene that is rapidly induced by blue light, encodes a novel mitochondrial, short-chain alcohol dehydrogenase-like protein in Neurospora crassaQ48060152
The Tri4 gene of Fusarium sporotrichioides encodes a cytochrome P450 monooxygenase involved in trichothecene biosynthesisQ48072040
Repeat-induced G-C to A-T mutations in NeurosporaQ48294007
DNA sequence, organization and regulation of the qa gene cluster of Neurospora crassaQ48297449
Deriving non-homogeneous DNA Markov chain models by cluster analysis algorithm minimizing multiple alignment entropy.Q52371895
Modulation of Polyketide Synthase Activity by Accessory Proteins During Lovastatin BiosynthesisQ60480995
Meiotic silencing by unpaired DNAQ62964509
Generation and characterization of NADH: ubiquinone oxidoreductase mutants in Neurospora crassaQ62967939
Guest: a 98 bp inverted repeat transposable element in Neurospora crassaQ72153314
White Paper: Genomics for Filamentous FungiQ73162508
THE DARK SIDE OF THE MYCELIUM: Melanins of Phytopathogenic FungiQ77149111
P433issue7
P407language of work or nameEnglishQ1860
P304page(s)1944-1954
P577publication date2003-04-01
P1433published inNucleic Acids ResearchQ135122
P1476titleWhat's in the genome of a filamentous fungus? Analysis of the Neurospora genome sequence
P478volume31

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cites work (P2860)
Q43507049A quantitative model of transcriptional differentiation driving host-pathogen interactions
Q36124598Agrobacterium-mediated transformation as a tool for functional genomics in fungi.
Q80098906Alternative splicing of transcripts of the transposon Restless is maintained in the foreign host Neurospora crassa and can be modified by introducing mutations at the 5' and 3' splice sites
Q44643786Analysis of nutrient-dependent transcript variations in Neurospora crassa
Q34026815Array Comparative Genomic Hybridizations: assessing the ability to recapture evolutionary relationships using an in silico approach
Q38074066Biotechnological production of ethanol from renewable resources by Neurospora crassa: an alternative to conventional yeast fermentations?
Q33299037Comparison of protein coding gene contents of the fungal phyla Pezizomycotina and Saccharomycotina
Q48138322Comparison of the yeast proteome to other fungal genomes to find core fungal genes.
Q94101397Current Awareness on Comparative and Functional Genomics
Q42774768Differential gene expression by Moniliophthora roreri while overcoming cacao tolerance in the field.
Q36899121Dissecting colony development of Neurospora crassa using mRNA profiling and comparative genomics approaches
Q46800520Diversity of the exoproteome of Fusarium graminearum grown on plant cell wall
Q22122103Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78
Q35850439Genome-wide expression analysis of genetic networks in Neurospora crassa
Q57228370Genomics in Neurospora crassa: From One-Gene-One-Enzyme to 10,000 Genes
Q35935037Glutathione, altruistic metabolite in fungi
Q35684970Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism
Q24817128Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination
Q33450610Relationship between phylogenetic distribution and genomic features in Neurospora crassa
Q28714383Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution
Q95789144Simple sequence repeats in Neurospora crassa: distribution, polymorphism and evolutionary inference
Q33299162Supramolecular organization of the respiratory chain in Neurospora crassa mitochondria
Q33366517Systems biology of the clock in Neurospora crassa
Q33939349Systems biology of the qa gene cluster in Neurospora crassa
Q43632313The BEM46-like protein appears to be essential for hyphal development upon ascospore germination in Neurospora crassa and is targeted to the endoplasmic reticulum
Q45816960The Neurospora crassa chr-1 gene is up-regulated by chromate and its encoded CHR-1 protein causes chromate sensitivity and chromium accumulation
Q24796007The Neurospora crassa genome opens up the world of filamentous fungi

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