Time- and cost-efficient identification of T-DNA insertion sites through targeted genomic sequencing

scientific article

Time- and cost-efficient identification of T-DNA insertion sites through targeted genomic sequencing is …
instance of (P31):
scholarly articleQ13442814

External links are
P819ADS bibcode2013PLoSO...870912L
P356DOI10.1371/JOURNAL.PONE.0070912
P8608Fatcat IDrelease_2c3pycq4fvccbggbjxyekoo5eq
P932PMC publication ID3741346
P698PubMed publication ID23951038
P5875ResearchGate publication ID255959440

P50authorNormand BrissonQ113972023
P2093author name stringBrian Boyle
Éric Zampini
Étienne Lepage
P2860cites workUse of Illumina sequencing to identify transposon insertions underlying mutant phenotypes in high-copy Mutator lines of maize.Q52599938
Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR.Q54164416
Divergent roles for the two PolI-like organelle DNA polymerases of Arabidopsis.Q54601971
Illumina sequencing technology as a method of identifying T-DNA insertion loci in activation-tagged Arabidopsis thaliana plantsQ83772284
Genetic applications of an inverse polymerase chain reactionQ24532247
Crystal structures of DNA-Whirly complexes and their role in Arabidopsis organelle genome repairQ24602012
Transcriptome profiling in conifers and the PiceaGenExpress database show patterns of diversification within gene families and interspecific conservation in vascular gene expressionQ28710132
Genome-wide insertional mutagenesis of Arabidopsis thalianaQ29617345
A high-throughput Arabidopsis reverse genetics systemQ30873092
Theoretical analysis of library screening using a N-dimensional pooling strategyQ33476740
An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approachesQ33489056
Restriction site extension PCR: a novel method for high-throughput characterization of tagged DNA fragments and genome walkingQ33582111
RecA maintains the integrity of chloroplast DNA molecules in ArabidopsisQ33900056
Exploiting bacterial DNA gyrase as a drug target: current state and perspectives.Q34214929
Arabidopsis thaliana DNA gyrase is targeted to chloroplasts and mitochondriaQ34338178
Major chromosomal rearrangements induced by T-DNA transformation in ArabidopsisQ34604456
Establishing gene function by mutagenesis in Arabidopsis thalianaQ35865205
Moving forward in reverse: genetic technologies to enable genome-wide phenomic screens in Arabidopsis.Q36498045
Genome-wide LORE1 retrotransposon mutagenesis and high-throughput insertion detection in Lotus japonicus.Q45979341
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue8
P407language of work or nameEnglishQ1860
P304page(s)e70912
P577publication date2013-08-12
P1433published inPLOS OneQ564954
P1476titleTime- and cost-efficient identification of T-DNA insertion sites through targeted genomic sequencing
P478volume8

Reverse relations

cites work (P2860)
Q91694660A T-DNA mutant screen that combines high-throughput phenotyping with the efficient identification of mutated genes by targeted genome sequencing
Q26751270Application of whole genome shotgun sequencing for detection and characterization of genetically modified organisms and derived products
Q36332980CONTRAILS: A tool for rapid identification of transgene integration sites in complex, repetitive genomes using low-coverage paired-end sequencing
Q38810137DNA enrichment approaches to identify unauthorized genetically modified organisms (GMOs).
Q36131870High-Throughput Analysis of T-DNA Location and Structure Using Sequence Capture
Q37083783Identification of Genomic Insertion and Flanking Sequence of G2-EPSPS and GAT Transgenes in Soybean Using Whole Genome Sequencing Method
Q38475800Leaf phenomics: a systematic reverse genetic screen for Arabidopsis leaf mutants
Q91626875Mapping of transgenic alleles in soybean using a nanopore-based sequencing strategy
Q41685031Next-generation genome sequencing can be used to rapidly characterise sequences flanking T-DNA insertions in random insertional mutants of Leptosphaeria maculans
Q102211073Strategies to produce T-DNA free CRISPRed fruit trees via Agrobacterium tumefaciens stable gene transfer
Q92712675TDNAscan: A Software to Identify Complete and Truncated T-DNA Insertions

Search more.