| scholarly article | Q13442814 |
| P50 | author | Robert W. Doms | Q117480256 |
| P2093 | author name string | Houman Dehghani | |
| Vanessa M. Hirsch | |||
| Bridget A. Puffer | |||
| P2860 | cites work | Molecular Biology and Evolution | Q1992656 |
| High levels of HIV-1 in plasma during all stages of infection determined by competitive PCR | Q22242246 | ||
| Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions | Q27860462 | ||
| HLA and HIV-1: heterozygote advantage and B*35-Cw*04 disadvantage | Q28138607 | ||
| Genomic structure of an attenuated quasi species of HIV-1 from a blood transfusion donor and recipients | Q28284190 | ||
| Virologic and immunologic characterization of long-term survivors of human immunodeficiency virus type 1 infection | Q28304764 | ||
| Rapid and irreversible CD4+ T-cell depletion induced by the highly pathogenic simian/human immunodeficiency virus SHIV(DH12R) is systemic and synchronous | Q28366094 | ||
| Viral dynamics in human immunodeficiency virus type 1 infection | Q29547908 | ||
| Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease | Q29616432 | ||
| Prognosis in HIV-1 infection predicted by the quantity of virus in plasma | Q29619980 | ||
| Viral genetic evolution in macaques infected with molecularly cloned simian immunodeficiency virus correlates with the extent of persistent viremia | Q33783429 | ||
| Mechanisms for adaptation of simian immunodeficiency virus to replication in alveolar macrophages | Q33787402 | ||
| Immunization with a modified vaccinia virus expressing simian immunodeficiency virus (SIV) Gag-Pol primes for an anamnestic Gag-specific cytotoxic T-lymphocyte response and is associated with reduction of viremia after SIV challenge | Q33799497 | ||
| Intrinsic susceptibility of rhesus macaque peripheral CD4(+) T cells to simian immunodeficiency virus in vitro is predictive of in vivo viral replication | Q33811266 | ||
| G protein-coupled receptors in HIV and SIV entry: new perspectives on lentivirus-host interactions and on the utility of animal models | Q39543389 | ||
| A lymph node-derived cytopathic simian immunodeficiency virus Mne variant replicates in nonstimulated peripheral blood mononuclear cells. | Q39577140 | ||
| Longitudinal phenotypic analysis of human immunodeficiency virus type 1-specific cytotoxic T lymphocytes: correlation with disease progression | Q39596414 | ||
| Loss of a single N-linked glycan allows CD4-independent human immunodeficiency virus type 1 infection by altering the position of the gp120 V1/V2 variable loops | Q39602333 | ||
| Plasma viremia in macaques infected with simian immunodeficiency virus: plasma viral load early in infection predicts survival. | Q39877649 | ||
| Envelope Sequence Variation, Neutralizing Antibodies, and Primate Lentivirus Persistence | Q40393218 | ||
| Pathogenic diversity of simian immunodeficiency viruses | Q40692683 | ||
| Cell-cell fusion assay to study role of chemokine receptors in human immunodeficiency virus type 1 entry | Q41137399 | ||
| Chemokine receptor expression on resident and inflammatory cells in the brain of macaques with simian immunodeficiency virus encephalitis. | Q42839156 | ||
| The genetic fate of molecularly cloned simian immunodeficiency virus in experimentally infected macaques | Q44357802 | ||
| Studies in subjects with long-term nonprogressive human immunodeficiency virus infection | Q44369963 | ||
| Cytotoxic-T-cell responses, viral load, and disease progression in early human immunodeficiency virus type 1 infection | Q44519261 | ||
| Variation in simian immunodeficiency virus env V1 region in simian AIDS-associated lymphoma | Q44580043 | ||
| Emergence of CTL coincides with clearance of virus during primary simian immunodeficiency virus infection in rhesus monkeys | Q45749710 | ||
| Correlation between humoral responses to human immunodeficiency virus type 1 envelope and disease progression in early-stage infection | Q45753336 | ||
| Rapid disease progression without seroconversion following primary human immunodeficiency virus type 1 infection--evidence for highly susceptible human hosts | Q45762680 | ||
| Human immunodeficiency virus infection and AIDS in a person with negative serology | Q45764049 | ||
| Sequence variation in the env gene of simian immunodeficiency virus recovered from immunized macaques is predominantly in the V1 region. | Q45773226 | ||
| Simian immunodeficiency virus/delta-induced immunodeficiency disease in rhesus monkeys: relation of antibody response and antigenemia | Q45840668 | ||
| A role for carbohydrates in immune evasion in AIDS. | Q47982875 | ||
| Genetic Restriction of HIV-1 Infection and Progression to AIDS by a Deletion Allele of the CKR5 Structural Gene | Q56591978 | ||
| Massive covert infection of helper T lymphocytes and macrophages by HIV during the incubation period of AIDS | Q59057787 | ||
| Antigenic variation of SIV: mutations in V4 alter the neutralization profile | Q71140271 | ||
| Variance and covariances of the numbers of synonymous and nonsynonymous substitutions per site | Q72168706 | ||
| New class I and II HLA alleles strongly associated with opposite patterns of progression to AIDS. | Q33844820 | ||
| CD4-independent use of Rhesus CCR5 by human immunodeficiency virus Type 2 implicates an electrostatic interaction between the CCR5 N terminus and the gp120 C4 domain | Q33848876 | ||
| Ability of the V3 loop of simian immunodeficiency virus to serve as a target for antibody-mediated neutralization: correlation of neutralization sensitivity, growth in macrophages, and decreased dependence on CD4 | Q33851405 | ||
| Induction of AIDS in rhesus monkeys by molecularly cloned simian immunodeficiency virus | Q33909944 | ||
| Rapid progression to simian AIDS can be accompanied by selection of CD4-independent gp120 variants with impaired ability to bind CD4. | Q34342950 | ||
| Pathogenesis of SIV encephalitis. Selection and replication of neurovirulent SIV | Q35763459 | ||
| Patterns of viral replication correlate with outcome in simian immunodeficiency virus (SIV)-infected macaques: effect of prior immunization with a trivalent SIV vaccine in modified vaccinia virus Ankara. | Q35861490 | ||
| A molecularly cloned, pathogenic, neutralization-resistant simian immunodeficiency virus, SIVsmE543-3. | Q35877501 | ||
| Viral dynamics of primary viremia and antiretroviral therapy in simian immunodeficiency virus infection | Q35895554 | ||
| Characterization of human immunodeficiency virus type 1-specific cytotoxic T lymphocyte clones isolated during acute seroconversion: recognition of autologous virus sequences within a conserved immunodominant epitope | Q36362713 | ||
| Change in coreceptor use correlates with disease progression in HIV-1--infected individuals | Q36376800 | ||
| The extent of early viral replication is a critical determinant of the natural history of simian immunodeficiency virus infection | Q36548993 | ||
| Spontaneous substitutions in the vicinity of the V3 analog affect cell tropism and pathogenicity of simian immunodeficiency virus | Q36632673 | ||
| Extensive envelope heterogeneity of simian immunodeficiency virus in tissues from infected macaques | Q36633502 | ||
| The "V3" domain is a determinant of simian immunodeficiency virus cell tropism. | Q36634149 | ||
| Analysis of simian immunodeficiency virus sequence variation in tissues of rhesus macaques with simian AIDS | Q36654291 | ||
| Selection of genetic variants of simian immunodeficiency virus in persistently infected rhesus monkeys | Q36683893 | ||
| Regulated expression of foreign genes in vaccinia virus under the control of bacteriophage T7 RNA polymerase and the Escherichia coli lac repressor | Q36697418 | ||
| Identification of individual human immunodeficiency virus type 1 gp120 amino acids important for CD4 receptor binding | Q36795606 | ||
| Variation in simian immunodeficiency virus env is confined to V1 and V4 during progression to simian AIDS. | Q36829102 | ||
| CD4-independent, CCR5-dependent infection of brain capillary endothelial cells by a neurovirulent simian immunodeficiency virus strain | Q36831291 | ||
| The principal neutralization determinant of simian immunodeficiency virus differs from that of human immunodeficiency virus type 1 | Q36839199 | ||
| Specific N-linked and O-linked glycosylation modifications in the envelope V1 domain of simian immunodeficiency virus variants that evolve in the host alter recognition by neutralizing antibodies | Q36884458 | ||
| Replicative capacity, cytopathic effect and cell tropism of HIV. | Q38242198 | ||
| Simian immunodeficiency virus encephalitis: analysis of envelope sequences from individual brain multinucleated giant cells and tissue samples | Q38456286 | ||
| Analysis of envelope changes acquired by SIVmac239 during neuroadaption in rhesus macaques | Q38874696 | ||
| Absence of coreceptor switch with disease progression in human immunodeficiency virus infections in India | Q38935437 | ||
| Emerging cytopathic and antigenic simian immunodeficiency virus variants influence AIDS progression. | Q39137553 | ||
| Coreceptor specificity of temporal variants of simian immunodeficiency virus Mne. | Q39137559 | ||
| Complex determinants of macrophage tropism in env of simian immunodeficiency virus | Q39268981 | ||
| CD4 independence of simian immunodeficiency virus Envs is associated with macrophage tropism, neutralization sensitivity, and attenuated pathogenicity | Q39370718 | ||
| Changes in the extracellular envelope glycoprotein of variants that evolve during the course of simian immunodeficiency virus SIVMne infection affect neutralizing antibody recognition, syncytium formation, and macrophage tropism but not replication, | Q39413133 | ||
| Progression to AIDS in macaques is associated with changes in the replication, tropism, and cytopathic properties of the simian immunodeficiency virus variant population. | Q39413139 | ||
| P433 | issue | 11 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | microbiology | Q7193 |
| immunology | Q101929 | ||
| convergent evolution | Q200312 | ||
| molecular evolution | Q856529 | ||
| Simian immunodeficiency virus | Q1890246 | ||
| P1104 | number of pages | 14 | |
| P304 | page(s) | 6405-6418 | |
| P577 | publication date | 2003-06-01 | |
| P1433 | published in | Journal of Virology | Q1251128 |
| P1476 | title | Unique Pattern of Convergent Envelope Evolution in Simian Immunodeficiency Virus-Infected Rapid Progressor Macaques: Association with CD4-Independent Usage of CCR5 | |
| P478 | volume | 77 |
| Q35947881 | A rapid progressor-specific variant clone of simian immunodeficiency virus replicates efficiently in vivo only in the absence of immune responses |
| Q33688391 | Accelerated evolution of SIV env within the cerebral compartment in the setting of morphine-dependent rapid disease progression |
| Q36162633 | Acquisition of CD4-dependence by CD4-independent SIV passaged in human peripheral blood mononuclear cells |
| Q37260795 | Adaptive evolution of simian immunodeficiency viruses isolated from 2 conventional-progressor macaques with encephalitis |
| Q33384065 | Association of progressive CD4(+) T cell decline in SIV infection with the induction of autoreactive antibodies |
| Q34979722 | CCR6 functions as a new coreceptor for limited primary human and simian immunodeficiency viruses |
| Q37123579 | CD4+ T cells support production of simian immunodeficiency virus Env antibodies that enforce CD4-dependent entry and shape tropism in vivo |
| Q35946467 | CD4-independent use of the CCR5 receptor by sequential primary SIVsm isolates |
| Q33872944 | CKR-L3, a deletion version CCR6-isoform shows coreceptor-activity for limited human and simian immunodeficiency viruses |
| Q35914362 | Characterization and Implementation of a Diverse Simian Immunodeficiency Virus SIVsm Envelope Panel in the Assessment of Neutralizing Antibody Breadth Elicited in Rhesus Macaques by Multimodal Vaccines Expressing the SIVmac239 Envelope. |
| Q37834097 | Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies |
| Q34301728 | Consistent patterns of change during the divergence of human immunodeficiency virus type 1 envelope from that of the inoculated virus in simian/human immunodeficiency virus-infected macaques |
| Q39370712 | Determinants within gp120 and gp41 contribute to CD4 independence of SIV Envs |
| Q35508285 | Effects of stabilization of the gp41 cytoplasmic domain on fusion activity and infectivity of SIVmac239. |
| Q34057907 | Emergence of CD4 independence envelopes and astrocyte infection in R5 simian-human immunodeficiency virus model of encephalitis |
| Q40619758 | Evolution of coreceptor use and CD4-independence in envelope clones derived from SIVsm-infected macaques |
| Q41230660 | Fitness Disadvantage of Transitional Intermediates Contributes to Dynamic Change in the Infecting-Virus Population during Coreceptor Switch in R5 Simian/Human Immunodeficiency Virus-Infected Macaques |
| Q48058604 | HIV-1 clade C envelopes obtained from late stage symptomatic Indian patients varied in their ability towards relative CD4 usages and sensitivity to CCR5 antagonist TAK-779. |
| Q34553778 | Immune failure in the absence of profound CD4+ T-lymphocyte depletion in simian immunodeficiency virus-infected rapid progressor macaques |
| Q34302179 | Infectious molecular clones from a simian immunodeficiency virus-infected rapid-progressor (RP) macaque: evidence of differential selection of RP-specific envelope mutations in vitro and in vivo |
| Q35857157 | Mucosal innate immune response associated with a timely humoral immune response and slower disease progression after oral transmission of simian immunodeficiency virus to rhesus macaques |
| Q36597124 | Persistent transcription of a nonintegrating mutant of simian immunodeficiency virus in rhesus macrophages |
| Q37034630 | Rapid disease progression to AIDS due to Simian immunodeficiency virus infection of macaques: host and viral factors |
| Q42094434 | Selective expression of human immunodeficiency virus Nef in specific immune cell populations of transgenic mice is associated with distinct AIDS-like phenotypes |
| Q89764782 | Signature patterns in region V4 of small ruminant lentivirus surface protein in sheep and goats |
| Q45415196 | Simian immunodeficiency virus envelope compartmentalizes in brain regions independent of neuropathology |
| Q35857688 | Unique pathology in simian immunodeficiency virus-infected rapid progressor macaques is consistent with a pathogenesis distinct from that of classical AIDS. |
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