Polarisation of prokaryotic chromosomes

scientific article published on April 1, 2003

Polarisation of prokaryotic chromosomes is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

External links are
P356DOI10.1016/S1369-5274(03)00024-9
P953full work available at URLhttps://api.elsevier.com/content/article/PII:S1369527403000249?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1369527403000249?httpAccept=text/plain
P698PubMed publication ID12732297
P5875ResearchGate publication ID10773738

P2093author name stringJean-Michel Louarn
Jean R. Lobry
P2860cites workGenome Sequence of the Plant Pathogen and Biotechnology Agent Agrobacterium tumefaciens C58Q22065836
Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.Q22065998
The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbiontsQ22066244
Genome sequence of Streptococcus agalactiae, a pathogen causing invasive neonatal diseaseQ22121956
Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environmentsQ24537612
Interaction with the recombination hot spot chi in vivo converts the RecBCD enzyme of Escherichia coli into a chi-independent recombinase by inactivation of the RecD subunitQ24563851
The recombination hot spot chi activates RecBCD recombination by converting Escherichia coli to a recD mutant phenocopyQ24563863
Evidence for symmetric chromosomal inversions around the replication origin in bacteriaQ24791763
Asymmetric directional mutation pressures in bacteriaQ24794717
The process of genome shrinkage in the obligate symbiont Buchnera aphidicolaQ24799605
Flip-flop around the origin and terminus of replication in prokaryotic genomesQ24806351
The complete genome sequence of Escherichia coli K-12Q27860542
FtsK Is a DNA motor protein that activates chromosome dimer resolution by switching the catalytic state of the XerC and XerD recombinasesQ28427479
The genome of the natural genetic engineer Agrobacterium tumefaciens C58Q28492352
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)Q29547307
Asymmetric substitution patterns in the two DNA strands of bacteriaQ29618276
Consequences of replication fork movement through transcription units in vivoQ30311901
Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic contextQ30982525
The Diagram, a Method for Comparing Sequences. Its Use with Amino Acid and Nucleotide SequencesQ33391059
Detection and possible role of two large nondivisible zones on the Escherichia coli chromosomeQ33684059
Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanismsQ33778360
Short palindromic repetitive DNA elements in enterobacteria: a surveyQ33836563
Identification of a putative chromosomal replication origin from Helicobacter pylori and its interaction with the initiator protein DnaAQ33939088
Polarization of the Escherichia coli chromosome. A view from the terminusQ34201614
The replication-recombination connection: insights from genomicsQ34392603
Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomesQ34482960
FtsK: Maxwell's Demon?Q34543438
Prophage lambda induces terminal recombination in Escherichia coli by inhibiting chromosome dimer resolution. An orientation-dependent cis-effect lending support to bipolarization of the terminus.Q34608564
Localized remodeling of the Escherichia coli chromosome: the patchwork of segments refractory and tolerant to inversion near the replication terminus.Q34612215
Evidence for conversion of heteroduplex transforming DNAs to homoduplexes by recipient pneumococcal cells (DNA strand resolution-DNA repair-bacterial transformation-genetic recombination)Q34690142
The DNA replication fork blocked at the Ter site may be an entrance for the RecBCD enzyme into duplex DNA.Q35967547
Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosomeQ36283328
Separation of microbial deoxyribonucleic acids into complementary strandsQ37684476
Genome rearrangement by replication-directed translocationQ37875580
Oriloc: prediction of replication boundaries in unannotated bacterial chromosomesQ37875703
Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilisQ39597331
Pyrococcus genome comparison evidences chromosome shuffling-driven evolutionQ39600831
When polymerases collide: replication and the transcriptional organization of the E. coli chromosomeQ39641681
Evidence from terminal recombination gradients that FtsK uses replichore polarity to control chromosome terminus positioning at division in Escherichia coliQ39679654
A dual role for the FtsK protein in Escherichia coli chromosome segregation.Q42583753
Distribution of chromosome length variation in natural isolates of Escherichia coliQ50132004
Intrastrand parity rules of DNA base composition and usage biases of synonymous codons.Q52209838
Skewed oligomers and origins of replication.Q52232869
Evolution of prokaryotic gene order: genome rearrangements in closely related species.Q52542073
Some properties of the deoxyribonucleic acid of phage alpha.Q52624117
Properties of a general model of DNA evolution under no-strand-bias conditions.Q52878851
Evolution of DNA base composition under no-strand-bias conditions when the substitution rates are not constant.Q52913076
The orientation bias of Chi sequences is a general tendency of G-rich oligomers.Q52927782
Asymmetry of frameshift mutagenesis during leading and lagging-strand replication in Escherichia coli.Q53768726
Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes.Q53932049
Genomics, Chi sites and codons: 'islands of preferred DNA pairing' are oceans of ORFs.Q53940315
Role of mutator alleles in adaptive evolution.Q54564129
DNA asymmetry and the replicational mutational pressureQ57317915
Filamentous phage integration requires the host recombinases XerC and XerDQ59060436
Bacterial Mode of Replication with Eukaryotic-Like Machinery in a Hyperthermophilic ArchaeonQ60134797
Characteristics of Chi distribution on different bacterial genomesQ60529742
Tn7 transposes proximal to DNA double-strand breaks and into regions where chromosomal DNA replication terminatesQ64388355
Restriction of the activity of the recombination site dif to a small zone of the Escherichia coli chromosomeQ71130795
Use of a transposon (Tndif) to obtain suppressing and nonsuppressing insertions of the dif resolvase site of Escherichia coliQ71130796
Gene order is not conserved in bacterial evolutionQ71476689
The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomesQ73643707
Functional polarization of the Escherichia coli chromosome terminus: the dif site acts in chromosome dimer resolution only when located between long stretches of opposite polarityQ73665160
Sequence-specific interactions in the Tus-Ter complex and the effect of base pair substitutions on arrest of DNA replication in Escherichia coliQ73797214
Physical mapping of an origin of bidirectional replication at the centre of the Borrelia burgdorferi linear chromosomeQ77410734
Fractionation of the complementary strands of coliphage lambda DNA based on the asymmetric distribution of the poly I,G-binding sitesQ81610724
Dynamic organization of chromosomal DNA in Escherichia coliQ115702538
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectmicrobiologyQ7193
P304page(s)101-108
P577publication date2003-04-01
P1433published inCurrent Opinion in MicrobiologyQ15752444
P1476titlePolarisation of prokaryotic chromosomes
P478volume6

Reverse relations

cites work (P2860)
Q33284531A novel linear plasmid mediates flagellar variation in Salmonella Typhi
Q34310334A random six-phase switch regulates pneumococcal virulence via global epigenetic changes
Q36253780Anaerobically Grown Escherichia coli Has an Enhanced Mutation Rate and Distinct Mutational Spectra
Q41772362Analysis of the terminus region of the Caulobacter crescentus chromosome and identification of the dif site
Q40100850Asymmetric activation of Xer site-specific recombination by FtsK.
Q37328409Bacteria as computers making computers
Q33310743Chromosome structuring limits genome plasticity in Escherichia coli.
Q22065745Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125
Q41130599Diversification of DnaA dependency for DNA replication in cyanobacterial evolution.
Q24803716Evolutionary relationships of Fusobacterium nucleatum based on phylogenetic analysis and comparative genomics
Q40917218Fast, DNA-sequence independent translocation by FtsK in a single-molecule experiment
Q34387370Fis is essential for the stability of linear plasmid pBSSB1 and affects the motility of Salmonella enterica serovar Typhi
Q34291264Fitness effects of replichore imbalance in Salmonella enterica.
Q54452598FtsK: a groovy helicase.
Q33402657Genome Projector: zoomable genome map with multiple views
Q24681753Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum
Q64083971Gram-Positive Bacteria-Like DNA Binding Machineries Involved in Replication Initiation and Termination Mechanisms of Mimivirus
Q39491027KOPS: DNA motifs that control E. coli chromosome segregation by orienting the FtsK translocase
Q38040099Measures of compositional strand bias related to replication machinery and its applications
Q37590028Mechanisms and evolution of control logic in prokaryotic transcriptional regulation.
Q35841326Microbial lifestyle and genome signatures
Q57010664Noise-reduction filtering for accurate detection of replication termini in bacterial genomes
Q33294775Quantitative analysis of mutation and selection pressures on base composition skews in bacterial chromosomes
Q33521368Quantitative analysis of replication-related mutation and selection pressures in bacterial chromosomes and plasmids using generalised GC skew index
Q24539073Roles for replichores and macrodomains in segregation of the Escherichia coli chromosome
Q43124959Selection effects on the positioning of genes and gene structures from the interplay of replication and transcription in bacterial genomes.
Q53627728Selection for chromosome architecture in bacteria.
Q33302567Separating the effects of mutation and selection in producing DNA skew in bacterial chromosomes
Q42201001The GC skew index: a measure of genomic compositional asymmetry and the degree of replicational selection.
Q22065991The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129
Q94464339Too Much of a Good Thing: How Ectopic DNA Replication Affects Bacterial Replication Dynamics
Q91663604Whole-genome comparison between the type strain of Halobacterium salinarum (DSM 3754T ) and the laboratory strains R1 and NRC-1

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