| P50 | author | Meng Xie | Q57048430 |
| P2093 | author name string | Bin Yu | |
| P2860 | cites work | The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis | Q24314338 |
| | Establishing, maintaining and modifying DNA methylation patterns in plants and animals | Q24630397 |
| | RNA polymerase V transcription guides ARGONAUTE4 to chromatin | Q24653430 |
| | Genetic and functional diversification of small RNA pathways in plants | Q24797901 |
| | Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1 | Q27677956 |
| | INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis | Q27679122 |
| | SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation | Q27681459 |
| | Molecular Mechanism of Action of Plant DRM De Novo DNA Methyltransferases | Q27683907 |
| | Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene | Q28344278 |
| | Arabidopsis HDA6 regulates locus-directed heterochromatin silencing in cooperation with MET1 | Q28477923 |
| | Small RNAs prevent transcription-coupled loss of histone H3 lysine 9 methylation in Arabidopsis thaliana | Q28743413 |
| | Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase | Q29617298 |
| | ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation | Q29618650 |
| | Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance | Q29622908 |
| | PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis | Q30481498 |
| | A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation. | Q33345476 |
| | Arabidopsis thaliana DNA methylation mutants | Q72794055 |
| | The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center | Q79900373 |
| | Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase | Q83043263 |
| | Cytoplasmic assembly and selective nuclear import of Arabidopsis Argonaute4/siRNA complexes | Q84170965 |
| | The DNA- and RNA-binding protein FACTOR of DNA METHYLATION 1 requires XH domain-mediated complex formation for its function in RNA-directed DNA methylation | Q84513481 |
| | HDA6 directly interacts with DNA methyltransferase MET1 and maintains transposable element silencing in Arabidopsis | Q85085541 |
| | RNA-directed DNA methylation and plant development require an IWR1-type transcription factor | Q33348333 |
| | A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis | Q33348976 |
| | Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana | Q33367576 |
| | SRA-domain proteins required for DRM2-mediated de novo DNA methylation | Q33388216 |
| | Intergenic transcription by RNA polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis | Q33565883 |
| | Transcriptional gene silencing by Arabidopsis microrchidia homologues involves the formation of heteromers | Q33665263 |
| | Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes | Q33668697 |
| | An SGS3-like protein functions in RNA-directed DNA methylation and transcriptional gene silencing in Arabidopsis | Q33806964 |
| | An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. | Q33833568 |
| | JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis | Q33839598 |
| | Independent chromatin binding of ARGONAUTE4 and SPT5L/KTF1 mediates transcriptional gene silencing | Q33954447 |
| | SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV. | Q33979576 |
| | RNA polymerase IV directs silencing of endogenous DNA. | Q33984841 |
| | Role of RNA polymerase IV in plant small RNA metabolism | Q34002973 |
| | Roles of dicer-like and argonaute proteins in TAS-derived small interfering RNA-triggered DNA methylation | Q34032980 |
| | Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II | Q34160383 |
| | Multisubunit RNA polymerases IV and V: purveyors of non-coding RNA for plant gene silencing | Q34202641 |
| | IDN2 and its paralogs form a complex required for RNA-directed DNA methylation | Q34263179 |
| | RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond | Q34385616 |
| | Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation. | Q34394829 |
| | Gardening the genome: DNA methylation in Arabidopsis thaliana | Q34414767 |
| | Dicing and slicing: the core machinery of the RNA interference pathway | Q34458132 |
| | The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs. | Q34642591 |
| | Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes | Q34881670 |
| | MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant | Q35056720 |
| | RNA-directed DNA methylation requires stepwise binding of silencing factors to long non-coding RNA | Q35062468 |
| | An atypical component of RNA-directed DNA methylation machinery has both DNA methylation-dependent and -independent roles in locus-specific transcriptional gene silencing. | Q35979204 |
| | Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components. | Q36023554 |
| | MORC family ATPases required for heterochromatin condensation and gene silencing. | Q36035505 |
| | A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation | Q36044798 |
| | Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis | Q36140690 |
| | Nomenclature and functions of RNA-directed RNA polymerases | Q36394550 |
| | In vitro transcription activities of Pol IV, Pol V, and RDR2 reveal coupling of Pol IV and RDR2 for dsRNA synthesis in plant RNA silencing | Q36495515 |
| | A SWI/SNF chromatin-remodeling complex acts in noncoding RNA-mediated transcriptional silencing | Q36575265 |
| | Uridylation of miRNAs by hen1 suppressor1 in Arabidopsis. | Q36639529 |
| | The splicing machinery promotes RNA-directed DNA methylation and transcriptional silencing in Arabidopsis | Q36778392 |
| | DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV | Q36855291 |
| | Viral genome methylation as an epigenetic defense against geminiviruses | Q36898691 |
| | NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation | Q37111127 |
| | Plant ARGONAUTES. | Q37175030 |
| | An effector of RNA-directed DNA methylation in arabidopsis is an ARGONAUTE 4- and RNA-binding protein. | Q37238540 |
| | CDC5, a DNA binding protein, positively regulates posttranscriptional processing and/or transcription of primary microRNA transcripts | Q37255952 |
| | RNA-directed DNA methylation requires an AGO4-interacting member of the SPT5 elongation factor family. | Q37264800 |
| | Interplay between active chromatin marks and RNA-directed DNA methylation in Arabidopsis thaliana | Q37289053 |
| | Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis. | Q37452372 |
| | A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development | Q37457953 |
| | The SET domain proteins SUVH2 and SUVH9 are required for Pol V occupancy at RNA-directed DNA methylation loci | Q37504640 |
| | Use of forward genetic screens to identify genes required for RNA-directed DNA methylation in Arabidopsis thaliana. | Q38063826 |
| | RNA-directed DNA methylation: an epigenetic pathway of increasing complexity | Q38209993 |
| | IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana | Q39733178 |
| | Transcriptional silencing and promoter methylation triggered by double-stranded RNA | Q40370869 |
| | Extensive demethylation of repetitive elements during seed development underlies gene imprinting | Q41107458 |
| | Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis. | Q41807998 |
| | Developmentally non-redundant SET domain proteins SUVH2 and SUVH9 are required for transcriptional gene silencing in Arabidopsis thaliana | Q42081776 |
| | In vitro activities of the multifunctional RNA silencing polymerase QDE-1 of Neurospora crassa | Q42427973 |
| | DNA methylation mediated by a microRNA pathway | Q43104318 |
| | The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci | Q43155078 |
| | Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation | Q43604842 |
| | RNA silencing genes control de novo DNA methylation | Q44664989 |
| | Ago hook and RNA helicase motifs underpin dual roles for SDE3 in antiviral defense and silencing of nonconserved intergenic regions. | Q45143925 |
| | NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis. | Q45401838 |
| | An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana. | Q46026182 |
| | Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing | Q46125181 |
| | Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning | Q46185049 |
| | Evolution of the RNA-dependent RNA polymerase (RdRP) genes: duplications and possible losses before and after the divergence of major eukaryotic groups | Q47579811 |
| | Reconstructing de novo silencing of an active plant retrotransposon. | Q48010011 |
| | Atypical RNA polymerase subunits required for RNA-directed DNA methylation | Q48136173 |
| | Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation | Q48146967 |
| | An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress. | Q51017015 |
| | Identification of microRNA processing determinants by random mutagenesis of Arabidopsis MIR172a precursor. | Q53354986 |
| | An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II. | Q54781004 |
| | An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis | Q56926925 |
| | Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination | Q59070695 |
| P433 | issue | 1 | |
| P921 | main subject | DNA methylation | Q874745 |
| P304 | page(s) | 23-31 | |
| P577 | publication date | 2015-02-01 | |
| P1433 | published in | Current Genomics | Q5195047 |
| P1476 | title | siRNA-directed DNA Methylation in Plants | |
| P478 | volume | 16 | |