DNA recognition by thyroid hormone and retinoic acid receptors: 3,4,5 rule modified

scientific article published on 27 November 2009

DNA recognition by thyroid hormone and retinoic acid receptors: 3,4,5 rule modified is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.MCE.2009.11.010
P932PMC publication ID3270409
P698PubMed publication ID19945505
P5875ResearchGate publication ID40038642

P2093author name stringMartin L Privalsky
Margaret M Jow
Theresa Q Phan
P2860cites workIdentification of a retinoic acid responsive element in the retinoic acid receptor beta geneQ24300919
RXR beta: a coregulator that enhances binding of retinoic acid, thyroid hormone, and vitamin D receptors to their cognate response elementsQ24318447
DNA Binding Site Sequence Directs Glucocorticoid Receptor Structure and ActivityQ27654868
Eukaryotic proteins expressed in Escherichia coli: An improved thrombin cleavage and purification procedure of fusion proteins with glutathione S-transferaseQ28131695
Minireview: nuclear receptor coactivators--an updateQ28205426
Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1Q28260929
International Union of Pharmacology. LIX. The pharmacology and classification of the nuclear receptor superfamily: thyroid hormone receptorsQ28276117
International Union of Pharmacology. LX. Retinoic acid receptorsQ28276127
The orientation and spacing of core DNA-binding motifs dictate selective transcriptional responses to three nuclear receptorsQ28297907
DNA recognition by the aberrant retinoic acid receptors implicated in human acute promyelocytic leukemiaQ28359892
The RXR heterodimers and orphan receptorsQ29547867
Direct repeats as selective response elements for the thyroid hormone, retinoic acid, and vitamin D3 receptorsQ29615768
Retinoid X receptor is an auxiliary protein for thyroid hormone and retinoic acid receptorsQ31159950
Identification of thyroid hormone receptor binding sites and target genes using ChIP-on-chip in developing mouse cerebellum.Q33412138
H-2RIIBP (RXR beta) heterodimerization provides a mechanism for combinatorial diversity in the regulation of retinoic acid and thyroid hormone responsive genesQ33937627
Nuclear receptors: one big familyQ34015466
The patterns of binding of RAR, RXR and TR homo- and heterodimers to direct repeats are dictated by the binding specificites of the DNA binding domains.Q34064607
Nuclear-receptor interactions on DNA-response elementsQ34282476
Multiplicity generates diversity in the retinoic acid signalling pathwaysQ35236424
Nuclear receptor recruitment of histone-modifying enzymes to target gene promotersQ35802810
The evolution of the nuclear receptor superfamilyQ35830301
DNA recognition by nuclear receptorsQ35830309
Genomic antagonism between retinoic acid and estrogen signaling in breast cancer.Q36028691
Widely spaced, directly repeated PuGGTCA elements act as promiscuous enhancers for different classes of nuclear receptors.Q36555582
The receptor-DNA complex determines the retinoid response: a mechanism for the diversification of the ligand signalQ36561262
Distinct retinoid X receptor-retinoic acid receptor heterodimers are differentially involved in the control of expression of retinoid target genes in F9 embryonal carcinoma cellsQ36568500
Nuclear hormone receptors involved in neoplasia: erb A exhibits a novel DNA sequence specificity determined by amino acids outside of the zinc-finger domainQ36678671
Differential DNA binding by monomeric, homodimeric, and potentially heteromeric forms of the thyroid hormone receptorQ36735798
The erbA oncogene represses the actions of both retinoid X and retinoid A receptors but does so by distinct mechanismsQ36822461
Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesisQ36960979
Discrimination of DNA response elements for thyroid hormone and estrogen is dependent on dimerization of receptor DNA binding domainsQ37063918
Heterodimers of retinoic acid receptors and thyroid hormone receptors display unique combinatorial regulatory propertiesQ37175215
Thyroid hormone receptor mutations found in renal clear cell carcinomas alter corepressor release and reveal helix 12 as key determinant of corepressor specificityQ37283621
The directly repeated RG(G/T)TCA motifs of the rat and mouse cellular retinol-binding protein II genes are promiscuous binding sites for RAR, RXR, HNF-4, and ARP-1 homo- and heterodimers.Q38312085
Thyroid hormone alters the DNA binding properties of chicken thyroid hormone receptors alpha and betaQ38325856
Binding characteristics of the thyroid hormone receptor homo- and heterodimers to consensus AGGTCA repeat motifsQ38327954
Participation of non-zinc finger residues in DNA binding by two nuclear orphan receptorsQ38329494
Capacity for cooperative binding of thyroid hormone (T3) receptor dimers defines wild type T3 response elementsQ38329547
Different DNA elements can modulate the conformation of thyroid hormone receptor heterodimer and its transcriptional activityQ38352956
Transactivation by the thyroid hormone receptor is dependent on the spacer sequence in hormone response elements containing directly repeated half-sitesQ38356485
RXR-dependent and RXR-independent transactivation by retinoic acid receptorsQ40405810
High-level expression of RXRalpha and the presence of endogenous ligands contribute to expression of a peroxisome proliferator-activated receptor-responsive gene in hepatoma cells.Q41031450
Functional characterization of a natural retinoic acid responsive elementQ41083429
Some new twists in the regulation of gene expression by thyroid hormone and retinoic acid receptorsQ41177554
DNA recognition by normal and oncogenic thyroid hormone receptors. Unexpected diversity in half-site specificity controlled by non-zinc-finger determinantsQ41199502
The interplay of half-site sequence and spacing on the activity of direct repeat thyroid hormone response elementsQ41360701
Retinoid-X receptor (RXR) differentially augments thyroid hormone response in cell lines as a function of the response element and endogenous RXR contentQ41373131
Triiodothyronine (T3) differentially affects T3-receptor/retinoic acid receptor and T3-receptor/retinoid X receptor heterodimer binding to DNAQ41594303
Differential capacity of wild type promoter elements for binding and trans-activation by retinoic acid and thyroid hormone receptorsQ41601861
Promoter context- and response element-dependent specificity of the transcriptional activation and modulating functions of retinoic acid receptorsQ41602857
Variable RXR requirements for thyroid hormone responsiveness of endogenous genesQ42913845
Retinoic acid receptors beta and gamma do not repress, but instead activate target gene transcription in both the absence and presence of hormone ligandQ44294741
Differential orientations of the DNA-binding domain and carboxy-terminal dimerization interface regulate binding site selection by nuclear receptor heterodimers.Q46039694
Determinants for selective RAR and TR recognition of direct repeat HREs.Q46177795
Role of the N terminus in DNA recognition by the v-erb A protein, an oncogenic derivative of a thyroid hormone receptorQ46214337
A carboxyl-terminal extension of the zinc finger domain contributes to the specificity and polarity of peroxisome proliferator-activated receptor DNA bindingQ46326083
A composite hormone response element mediates the transactivation of the rat oxytocin gene by different classes of nuclear hormone receptorsQ48369192
Half-site spacing and orientation determines whether thyroid hormone and retinoic acid receptors and related factors bind to DNA response elements as monomers, homodimers, or heterodimersQ67488391
Retinoid X receptor alters the determination of DNA binding specificity by the P-box amino acids of the thyroid hormone receptorQ71245805
5'-flanking sequences in thyroid hormone response element half-sites determine the requirement of retinoid X receptor for receptor-mediated gene expressionQ73201799
Thyroid hormone response element organization dictates the composition of active receptorQ79802949
P4510describes a project that usesImageQuantQ112270642
P433issue1-2
P407language of work or nameEnglishQ1860
P921main subjecttretinoinQ29417
P304page(s)88-98
P577publication date2009-11-27
P1433published inMolecular and Cellular EndocrinologyQ1573600
P1476titleDNA recognition by thyroid hormone and retinoic acid receptors: 3,4,5 rule modified
P478volume319

Reverse relations

cites work (P2860)
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Q37779763Genetic and pathologic aspects of retinoic acid-induced limb malformations in the mouse
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Q34297363Mechanisms of thyroid hormone action
Q36859379Munc18c in adipose tissue is downregulated in obesity and is associated with insulin
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Q35785084SMRTε, a corepressor variant, interacts with a restricted subset of nuclear receptors, including the retinoic acid receptors α and β
Q26860170Signaling through retinoic acid receptors in cardiac development: Doing the right things at the right times
Q37732566The ability of thyroid hormone receptors to sense t4 as an agonist depends on receptor isoform and on cellular cofactors
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Q36083186Thyroid hormone receptors and resistance to thyroid hormone disorders
Q34113919Thyroid hormone-regulated gene expression in juvenile mouse liver: identification of thyroid response elements using microarray profiling and in silico analyses
Q45071253Vitamin D Receptor Signaling and Cancer

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