Development of a Multiple Loci Variable Number of Tandem Repeats Analysis (MLVA) to Unravel the Intra-Pathovar Structure of Pseudomonas syringae pv. actinidiae Populations Worldwide.

scientific article published on 11 August 2015

Development of a Multiple Loci Variable Number of Tandem Repeats Analysis (MLVA) to Unravel the Intra-Pathovar Structure of Pseudomonas syringae pv. actinidiae Populations Worldwide. is …
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scholarly articleQ13442814

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P819ADS bibcode2015PLoSO..1035310C
P356DOI10.1371/JOURNAL.PONE.0135310
P932PMC publication ID4532359
P698PubMed publication ID26262683
P5875ResearchGate publication ID280918396

P50authorChristine PourcelQ56458925
Angelo MazzagliaQ59702978
Gilles VergnaudQ30505492
Russell PoulterQ42800648
P2093author name stringMargi I Butler
Lorenzo Gallipoli
Giorgio M Balestra
Maria C Taratufolo
Serena Ciarroni
P2860cites workSignificance of the identification in the Horn of Africa of an exceptionally deep branching Mycobacterium tuberculosis cladeQ21090818
Pseudomonas syringae pv. actinidiae from recent outbreaks of kiwifruit bacterial canker belong to different clones that originated in ChinaQ21133656
Inference of population structure using multilocus genotype dataQ24548114
Progenitor “Mycobacterium canettii” clone responsible for lymph node tuberculosis epidemic, DjiboutiQ24620346
High resolution, on-line identification of strains from the Mycobacterium tuberculosis complex based on tandem repeat typingQ24794991
A new highly discriminatory multiplex capillary-based MLVA assay as a tool for the epidemiological survey of Pseudomonas aeruginosa in cystic fibrosis patients.Q54324587
Phylogenetic relationships among global populations of Pseudomonas syringae pv. actinidiaeQ57213978
Bacterial Canker on Kiwifruit in Italy: Anatomical Changes in the Wood and in the Primary Infection SitesQ60504134
First Report of Pseudomonas syringae pv. actinidiae, the Causal Agent of Bacterial Canker of Kiwifruit in Slovenia.Q67461000
A Multiplex PCR Assay for Detection of Pseudomonas syringae pv. actinidiae and Differentiation of Populations with Different Geographic OriginQ91356670
First Report of Bacterial Canker of Kiwifruit Caused by Pseudomonas syringae pv. actinidiae in TurkeyQ91381574
First Report of Pseudomonas syringae pv. actinidiae, the Causal Agent of Bacterial Canker of Kiwifruit in FranceQ91402065
Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestisQ24796957
Inference of population structure using multilocus genotype data: linked loci and correlated allele frequenciesQ26734731
High throughput multiple locus variable number of tandem repeat analysis (MLVA) of Staphylococcus aureus from human, animal and food sourcesQ27305822
A MLVA genotyping scheme for global surveillance of the citrus pathogen Xanthomonas citri pv. citri suggests a worldwide geographical expansion of a single genetic lineageQ28658820
Measurement of DiversityQ29303177
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation studyQ29547289
Inferring weak population structure with the assistance of sample group informationQ29614777
Inference of population structure using multilocus genotype data: dominant markers and null allelesQ29615942
A proposed nomenclature and classification for plant pathogenic bacteriaQ30051536
Brucella papionis sp. nov., isolated from baboons (Papio spp.).Q30854237
MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialisQ33484440
Differentiation of strains of Xylella fastidiosa by a variable number of tandem repeat analysisQ33990245
Pseudomonas syringae pv. actinidiae draft genomes comparison reveal strain-specific features involved in adaptation and virulence to Actinidia speciesQ34087701
Molecular Characteristics of Pseudomonas syringae pv. actinidiae Strains Isolated in Korea and a Multiplex PCR Assay for Haplotype DifferentiationQ34242443
Pseudomonas syringae pv. actinidiae (PSA) isolates from recent bacterial canker of kiwifruit outbreaks belong to the same genetic lineageQ34270794
Use of multilocus variable-number tandem repeat analysis (MLVA) in eight European countries, 2012.Q34325496
Identification of variable-number tandem-repeat (VNTR) sequences in Acinetobacter baumannii and interlaboratory validation of an optimized multiple-locus VNTR analysis typing schemeQ34596599
On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typingQ34682070
Multilocus variable-number-tandem-repeats analysis (MLVA) distinguishes a clonal complex of Clavibacter michiganensis subsp. michiganensis strains isolated from recent outbreaks of bacterial wilt and canker in BelgiumQ34759502
Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant diseaseQ34916668
Multiple locus variable number of tandem repeats analysisQ34986450
Highly polymorphic markers reveal the establishment of an invasive lineage of the citrus bacterial pathogen Xanthomonas citri pv. citri in its area of originQ35076766
High-throughput typing method to identify a non-outbreak-involved Legionella pneumophila strain colonizing the entire water supply system in the town of Rennes, FranceQ35271436
Housekeeping gene sequencing and multilocus variable-number tandem-repeat analysis to identify subpopulations within Pseudomonas syringae pv. maculicola and Pseudomonas syringae pv. tomato that correlate with host specificityQ35941147
Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria.Q36153028
A rapid allele variant discrimination method for Yersinia pestis strains based on high-resolution melting curve analysisQ37579357
From local surveys to global surveillance: three high-throughput genotyping methods for epidemiological monitoring of Xanthomonas citri pv. citri pathotypesQ38925330
Phylogeography and population structure of the biologically invasive phytopathogen Erwinia amylovora inferred using minisatellites.Q42244895
Development of variable number of tandem repeats typing schemes for Ralstonia solanacearum, the agent of bacterial wilt, banana Moko disease and potato brown rot.Q42276591
Development of a variable number of tandem repeats typing scheme for the bacterial rice pathogen Xanthomonas oryzae pv. oryzicolaQ46317605
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue8
P407language of work or nameEnglishQ1860
P921main subjectPseudomonas syringaeQ311202
tandem repeatQ3456514
P304page(s)e0135310
P577publication date2015-08-11
P1433published inPLOS OneQ564954
P1476titleDevelopment of a Multiple Loci Variable Number of Tandem Repeats Analysis (MLVA) to Unravel the Intra-Pathovar Structure of Pseudomonas syringae pv. actinidiae Populations Worldwide
P478volume10

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cites work (P2860)
Q57094214Comparison between complete genomes of an isolate of Pseudomonas syringae pv. actinidiae from Japan and a New Zealand isolate of the pandemic lineage
Q58719192Genetic and Phenotypic Characterization of Indole-Producing Isolates of pv. Obtained From Chilean Kiwifruit Orchards
Q52576108Genomic Structural Variations Affecting Virulence During Clonal Expansion of Pseudomonas syringae pv. actinidiae Biovar 3 in Europe.
Q47699317Modeling and mapping the current and future distribution of Pseudomonas syringae pv. actinidiae under climate change in China
Q49166497Molecular Epidemiology of Bacterial Wilt in the Madagascar Highlands Caused by Andean (Phylotype IIB-1) and African (Phylotype III) Brown Rot Strains of the Ralstonia solanacearum Species Complex.
Q60921788The Genome Sequence of M228, a Chinese Isolate of Pseudomonas syringae pv. actinidiae, Illustrates Insertion Sequence Element Mobility

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