A Computational Gene Expression Score for Predicting Immune Injury in Renal Allografts

scientific article published on 14 September 2015

A Computational Gene Expression Score for Predicting Immune Injury in Renal Allografts is …
instance of (P31):
scholarly articleQ13442814
meta-analysisQ815382

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P819ADS bibcode2015PLoSO..1038133S
P356DOI10.1371/JOURNAL.PONE.0138133
P932PMC publication ID4569485
P698PubMed publication ID26367000
P5875ResearchGate publication ID281852411

P2093author name stringMinnie M Sarwal
Tara K Sigdel
Flavio Vincenti
Szu-Chuan Hsieh
Oriol Bestard
Izabella Damm
Silke Roedder
Tim Q Tran
P2860cites workAnalysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodQ25938999
Allograft rejection and tubulointerstitial fibrosis in human kidney allografts: interrogation by urinary cell mRNA profilingQ26996813
Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arraysQ28646554
Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencingQ29618021
Computational analysis and modeling of genome-scale avidity distribution of transcription factor binding sites in chip-pet experimentsQ33342932
Differentially Expressed RNA from Public Microarray Data Identifies Serum Protein Biomarkers for Cross-Organ Transplant Rejection and Other ConditionsQ33707373
Integrative urinary peptidomics in renal transplantation identifies biomarkers for acute rejectionQ33748511
Comparison of mortality in all patients on dialysis, patients on dialysis awaiting transplantation, and recipients of a first cadaveric transplant.Q50654391
A study of the quality of life and cost-utility of renal transplantation.Q53621261
Molecular heterogeneity in acute renal allograft rejection identified by DNA microarray profiling.Q53924174
Improving long-term outcomes for transplant patients: making the case for long-term disease-specific and multidisciplinary researchQ85013471
CXCL9 and CXCL10 accelerate acute transplant rejection mediated by alloreactive memory T cells in a mouse retransplantation modelQ33769652
Shotgun proteomics identifies proteins specific for acute renal transplant rejection.Q33903986
Expression of chemokines and chemokine receptors during human renal transplant rejectionQ33936064
The cell-specific induction of CXC chemokine ligand 9 mediated by IFN-gamma in microglia of the central nervous system is determined by the myeloid transcription factor PU.1.Q34079019
Validation of noninvasive diagnosis of BK virus nephropathy and identification of prognostic biomarkersQ34337472
The kSORT assay to detect renal transplant patients at high risk for acute rejection: results of the multicenter AART studyQ34489123
Perturbations in the urinary exosome in transplant rejectionQ34930059
Urinary chemokines CXCL9 and CXCL10 are noninvasive markers of renal allograft rejection and BK viral infectionQ35250639
Recent advances in biomarker discovery in solid organ transplant by proteomicsQ35764483
Molecular networks involved in the immune control of BK polyomavirus.Q36464463
A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantationQ37246506
Urinary cell mRNA profiles predictive of human kidney allograft statusQ37626743
Biomarkers for kidney transplant rejectionQ38180358
Progressive histological damage in renal allografts is associated with expression of innate and adaptive immunity genesQ39712114
Banff '09 meeting report: antibody mediated graft deterioration and implementation of Banff working groups.Q39904553
Pediatric renal biopsy: should this procedure be performed in an outpatient setting?Q41738908
The identification of novel potential injury mechanisms and candidate biomarkers in renal allograft rejection by quantitative proteomicsQ41926369
Genomics of BK viremia in kidney transplant recipientsQ42250844
A peripheral blood diagnostic test for acute rejection in renal transplantation.Q42848519
Urine CXCL10/IP-10 Fingers Ongoing Antibody-Mediated Kidney Graft RejectionQ43196986
Proteomic-based detection of urine proteins associated with acute renal allograft rejection.Q43611038
Prediction of acute renal allograft rejection by urinary monokine induced by IFN-gamma (MIG).Q44244113
Molecular evaluation of BK polyomavirus nephropathyQ44313013
Renal allograft function in matched pediatric and adult recipient pairs of the same donorQ44869696
Noninvasive detection of acute and chronic injuries in human renal transplant by elevation of multiple cytokines/chemokines in urine.Q45960187
Expression of many immunologically important genes in Mycobacterium tuberculosis-infected macrophages is independent of both TLR2 and TLR4 but dependent on IFN-alphabeta receptor and STAT1.Q46664121
Influence of the recipient's size upon renal function following kidney transplantation. An experimental and clinical investigationQ47243098
Noninvasive detection of renal allograft inflammation by measurements of mRNA for IP-10 and CXCR3 in urineQ47588349
Urinary CXCL9 and CXCL10 levels correlate with the extent of subclinical tubulitis.Q47751862
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue9
P407language of work or nameEnglishQ1860
P304page(s)e0138133
P577publication date2015-09-14
P1433published inPLOS OneQ564954
P1476titleA Computational Gene Expression Score for Predicting Immune Injury in Renal Allografts
P478volume10

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cites work (P2860)
Q92311964A urinary Common Rejection Module (uCRM) score for non-invasive kidney transplant monitoring
Q38966041Advances in diagnostics for transplant rejection
Q89661977Bioinformatics analyses on the immune status of renal transplant patients, a systemic research of renal transplantation
Q33842783Biomarkers in renal transplantation: An updated review
Q36206861Myocardial Gene Expression Profiling to Predict and Identify Cardiac Allograft Acute Cellular Rejection: The GET-Study
Q49724104Polyomavirus BK Nephropathy-Associated Transcriptomic Signatures: A Critical Reevaluation
Q54955874Targeted Transcriptional Profiling of Kidney Transplant Biopsies.
Q100762021Technical considerations when designing a gene expression panel for renal transplant diagnosis
Q56985537The common rejection module in chronic rejection post lung transplantation

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