Polyomavirus BK Nephropathy-Associated Transcriptomic Signatures: A Critical Reevaluation

scientific article published on 2 February 2018

Polyomavirus BK Nephropathy-Associated Transcriptomic Signatures: A Critical Reevaluation is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1097/TXD.0000000000000752
P932PMC publication ID5811268
P698PubMed publication ID29464200

P50authorGang ZengQ59159264
P2093author name stringParmjeet Randhawa
Ling Pan
Yuchen Huang
Zijie Wang
Zahidur Abedin
Benjamin Adam
Zili Lyu
P2860cites workKidney transplant rejection and tissue injury by gene profiling of biopsies and peripheral blood lymphocytesQ24675073
Tubulitis and epithelial cell alterations in mouse kidney transplant rejection are independent of CD103, perforin or granzymes A/B.Q33251846
Global effects of BKV infection on gene expression in human primary kidney epithelial cellsQ33620674
International standardization of criteria for the histologic diagnosis of renal allograft rejection: the Banff working classification of kidney transplant pathologyQ34354852
The kSORT assay to detect renal transplant patients at high risk for acute rejection: results of the multicenter AART studyQ34489123
Genomic meta-analysis of growth factor and integrin pathways in chronic kidney transplant injuryQ34687190
Clinical and plasma proteomic markers correlating with chronic kidney disease after liver transplantationQ35194548
Gene expression profiling in acute allograft rejection: challenging the immunologic constant of rejection hypothesisQ35541507
A Computational Gene Expression Score for Predicting Immune Injury in Renal AllograftsQ35772514
Performance of gene-expression profiling test score variability to predict future clinical events in heart transplant recipients.Q35801902
Identification of a peripheral blood transcriptional biomarker panel associated with operational renal allograft toleranceQ36024233
Molecular networks involved in the immune control of BK polyomavirus.Q36464463
The immunologic constant of rejectionQ37155128
Clinical usefulness of gene-expression profile to rule out acute rejection after heart transplantation: CARGO II.Q37241404
A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantationQ37246506
Mining the human urine proteome for monitoring renal transplant injuryQ37573081
Endothelial transcripts uncover a previously unknown phenotype: C4d-negative antibody-mediated rejectionQ37654098
Application of Operational Tolerance Signatures Are Limited by Variability and Type of Immunosuppression in Renal Transplant Recipients: A Cross-Sectional Study.Q37715369
Impact of a polyomavirus (BKV) infection on mRNA expression in human endothelial cellsQ38517671
Kidney transplants with progressing chronic diseases express high levels of acute kidney injury transcriptsQ39477756
Molecular phenotypes of acute kidney injury in kidney transplants.Q39651276
The molecular phenotype of 6-week protocol biopsies from human renal allografts: reflections of prior injury but not future course.Q39812222
A molecular classifier for predicting future graft loss in late kidney transplant biopsiesQ39869686
Intragraft Antiviral-Specific Gene Expression as a Distinctive Transcriptional Signature for Studies in Polyomavirus-Associated Nephropathy.Q40689820
Multiplexed color-coded probe-based gene expression assessment for clinical molecular diagnostics in formalin-fixed paraffin-embedded human renal allograft tissue.Q41001433
Molecular correlates of renal function in kidney transplant biopsiesQ42009009
The Banff 2015 Kidney Meeting Report: Current Challenges in Rejection Classification and Prospects for Adopting Molecular Pathology.Q42174325
Genomics of BK viremia in kidney transplant recipientsQ42250844
BK polyomavirus in solid organ transplantationQ42272314
A peripheral blood diagnostic test for acute rejection in renal transplantation.Q42848519
Antibody-mediated microcirculation injury is the major cause of late kidney transplant failureQ43918875
Molecular evaluation of BK polyomavirus nephropathyQ44313013
Modification of the transcriptomic response to renal ischemia/reperfusion injury by lipoxin analog.Q44503825
A common blood gene assay predates clinical and histological rejection in kidney and heart allograftsQ45701579
Molecular diagnosis of T cell-mediated rejection in human kidney transplant biopsiesQ46363554
Changes in Urinary Microbiome Populations Correlate in Kidney Transplants With Interstitial Fibrosis and Tubular Atrophy Documented in Early Surveillance Biopsies.Q46493273
Interferon-gamma and donor MHC class I control alternative macrophage activation and activin expression in rejecting kidney allografts: a shift in the Th1-Th2 paradigmQ46738367
Molecular Assessment of Microcirculation Injury in Formalin-Fixed Human Cardiac Allograft Biopsies With Antibody-Mediated Rejection.Q48165787
Using Molecular Phenotyping to Guide Improvements in the Histologic Diagnosis of T Cell-Mediated Rejection.Q50743724
Plasma protein biomarkers enhance the clinical prediction of kidney injury recovery in patients undergoing liver transplantation.Q51063004
Incorporation of pathology and laboratory findings into management algorithms for polyomavirus nephropathy.Q51210655
A new diagnostic algorithm for antibody-mediated microcirculation inflammation in kidney transplants.Q51432032
NK cell transcripts and NK cells in kidney biopsies from patients with donor-specific antibodies: evidence for NK cell involvement in antibody-mediated rejection.Q51676450
The transcriptome of human cytotoxic T cells: measuring the burden of CTL-associated transcripts in human kidney transplants.Q51966817
Interpreting NK cell transcripts versus T cell transcripts in renal transplant biopsies.Q53181446
Microarray analysis of rejection in human kidney transplants using pathogenesis-based transcript sets.Q53521493
Defining the canonical form of T-cell-mediated rejection in human kidney transplants.Q54442988
Endothelial gene expression in kidney transplants with alloantibody indicates antibody-mediated damage despite lack of C4d staining.Q54469292
Molecular correlates of scarring in kidney transplants: the emergence of mast cell transcriptsQ79767898
Transplant vasculopathy is associated with increased AlloMap gene expression scoreQ80086427
Alternative macrophage activation-associated transcripts in T-cell-mediated rejection of mouse kidney allograftsQ82732603
A common peripheral blood gene set for diagnosis of operational tolerance in pediatric and adult liver transplantationQ83387375
The nature of biopsies with "borderline rejection" and prospects for eliminating this categoryQ85082215
Loss of solute carriers in T cell-mediated rejection in mouse and human kidneys: an active epithelial injury-repair responseQ85114918
P433issue2
P921main subjecttranscriptomeQ252857
P304page(s)e339
P577publication date2018-02-02
P1433published inTransplantation directQ27726309
P1476titlePolyomavirus BK Nephropathy-Associated Transcriptomic Signatures: A Critical Reevaluation
P478volume4

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cites work (P2860)
Q92819794Defining housekeeping genes suitable for RNA-seq analysis of the human allograft kidney biopsy tissue
Q62662495Development of a multivariable gene-expression signature targeting T-cell-mediated rejection in peripheral blood of kidney transplant recipients validated in cross-sectional and longitudinal samples

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