| P50 | author | Sergei L. Kosakovsky Pond | Q55456380 |
| | Davey Smith | Q73235334 |
| P2093 | author name string | M J Lewis | |
| | D D Richman | |
| | J C Guatelli | |
| | S K Pillai | |
| | O O Yang | |
| | S J Little | |
| | C M Noviello | |
| P2860 | cites work | Nef-induced CD4 degradation: a diacidic-based motif in Nef functions as a lysosomal targeting signal through the binding of beta-COP in endosomes | Q22009370 |
| | Genotypic and phenotypic characterization of HIV-1 patients with primary infection | Q22242245 |
| | Endocytosis of major histocompatibility complex class I molecules is induced by the HIV–1 Nef protein | Q22251058 |
| | HIV-1 Nef protein protects infected primary cells against killing by cytotoxic T lymphocytes. | Q54148550 |
| | Reversion of CTL escape–variant immunodeficiency viruses in vivo | Q56427919 |
| | Potential impact of recombination on sitewise approaches for detecting positive natural selection | Q59192521 |
| | Dynamics of viral variants in HIV-1 Nef and specific cytotoxic T lymphocytes in vivo | Q71727882 |
| | HIV-1-specific CD8+ T cell responses and viral evolution in women and infants | Q81447131 |
| | Neutralizing antibody responses drive the evolution of human immunodeficiency virus type 1 envelope during recent HIV infection | Q24538985 |
| | The rapid generation of mutation data matrices from protein sequences | Q27860880 |
| | Genomic structure of an attenuated quasi species of HIV-1 from a blood transfusion donor and recipients | Q28284190 |
| | Not so different after all: a comparison of methods for detecting amino acid sites under selection | Q28306719 |
| | HyPhy: hypothesis testing using phylogenies | Q29013475 |
| | Datamonkey: rapid detection of selective pressure on individual sites of codon alignments | Q29615126 |
| | The HIV-1 Nef protein as a target for antiretroviral therapy | Q30160188 |
| | Site-to-site variation of synonymous substitution rates | Q31000547 |
| | Adaptation to different human populations by HIV-1 revealed by codon-based analyses | Q33247450 |
| | Semen-specific genetic characteristics of human immunodeficiency virus type 1 env. | Q33717839 |
| | Characterization of human immunodeficiency virus type 1 (HIV-1) envelope variation and neutralizing antibody responses during transmission of HIV-1 subtype B. | Q33780595 |
| | Selection for human immunodeficiency virus type 1 envelope glycosylation variants with shorter V1-V2 loop sequences occurs during transmission of certain genetic subtypes and may impact viral RNA levels | Q33780649 |
| | Sequence variations in human immunodeficiency virus type 1 Nef are associated with different stages of disease | Q33815169 |
| | CD4 down-modulation by human immunodeficiency virus type 1 Nef correlates with the efficiency of viral replication and with CD4(+) T-cell depletion in human lymphoid tissue ex vivo | Q33847490 |
| | Selective escape from CD8+ T-cell responses represents a major driving force of human immunodeficiency virus type 1 (HIV-1) sequence diversity and reveals constraints on HIV-1 evolution | Q34092644 |
| | Sexual transmission of single human immunodeficiency virus type 1 virions encoding highly polymorphic multisite cytotoxic T-lymphocyte escape variants | Q34123849 |
| | Dynamic evolution of the human immunodeficiency virus type 1 pathogenic factor, Nef. | Q34302168 |
| | Physical interaction of the HIV-1 Nef protein with beta-COP, a component of non-clathrin-coated vesicles essential for membrane traffic. | Q34327073 |
| | Nef-mediated downregulation of CD4 enhances human immunodeficiency virus type 1 replication in primary T lymphocytes | Q34999681 |
| | Acidic di-leucine motif essential for AP-3-dependent sorting and restriction of the functional specificity of the Vam3p vacuolar t-SNARE. | Q36255662 |
| | Analysis of human immunodeficiency virus type 1 nef gene sequences present in vivo | Q36650992 |
| | Frequent transmission of cytotoxic-T-lymphocyte escape mutants of human immunodeficiency virus type 1 in the highly HLA-A24-positive Japanese population | Q36683968 |
| | Predisposition to abacavir hypersensitivity conferred by HLA-B*5701 and a haplotypic Hsp70-Hom variant | Q37356747 |
| | Virus-specific cytotoxic T-lymphocyte responses select for amino-acid variation in simian immunodeficiency virus Env and Nef. | Q38318792 |
| | Grossly defective nef gene sequences in a human immunodeficiency virus type 1-seropositive long-term nonprogressor | Q39578202 |
| | Modulation of different human immunodeficiency virus type 1 Nef functions during progression to AIDS | Q39605895 |
| | Evasion of cytotoxic T lymphocytes is a functional constraint maintaining HIV-1 Nef expression | Q40365272 |
| | Broadly Increased Sensitivity to Cytotoxic T Lymphocytes Resulting from Nef Epitope Escape Mutations | Q40628580 |
| | Passive sexual transmission of human immunodeficiency virus type 1 variants and adaptation in new hosts | Q41494621 |
| | A simple hierarchical approach to modeling distributions of substitution rates. | Q42988209 |
| | HIV-1 Nef is preferentially recognized by CD8 T cells in primary HIV-1 infection despite a relatively high degree of genetic diversity | Q43438499 |
| | GARD: a genetic algorithm for recombination detection | Q45134816 |
| | HIV-1 genomic RNA diversification following sexual and parenteral virus transmission | Q45873185 |
| | A genetic algorithm approach to detecting lineage-specific variation in selection pressure. | Q45995621 |
| | Lack of neutralizing antibody response to HIV-1 predisposes to superinfection. | Q46078929 |
| | Domain assembly, surface accessibility and sequence conservation in full length HIV-1 Nef. | Q46586694 |
| | HIV evolution: CTL escape mutation and reversion after transmission | Q47211742 |
| | Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission | Q47878972 |
| P433 | issue | 9 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | sexually transmitted infection | Q12198 |
| | sexual transmission | Q45349134 |
| P304 | page(s) | 4776-4786 | |
| P577 | publication date | 2007-02-28 | |
| P1433 | published in | Journal of Virology | Q1251128 |
| P1476 | title | Maintenance of Nef-mediated modulation of major histocompatibility complex class I and CD4 after sexual transmission of human immunodeficiency virus type 1 | |
| P478 | volume | 81 | |