| scholarly article | Q13442814 |
| P50 | author | Aviv Regev | Q4829027 |
| Rahul Satija | Q42799623 | ||
| Peter W Reddien | Q88073376 | ||
| Omri Wurtzel | Q108891963 | ||
| P2093 | author name string | Amber Poirier | |
| Lauren E Cote | |||
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| Formaldehyde-based whole-mount in situ hybridization method for planarians | Q41947311 | ||
| Single-cell analysis reveals functionally distinct classes within the planarian stem cell compartment | Q41990372 | ||
| Transcriptome Analysis of the Planarian Eye Identifies ovo as a Specific Regulator of Eye Regeneration | Q41994859 | ||
| Planarian regeneration involves distinct stem cell responses to wounds and tissue absence | Q42413468 | ||
| Polarized notum Activation at Wounds Inhibits Wnt Function to Promote Planarian Head Regeneration | Q42555211 | ||
| Reactivating head regrowth in a regeneration-deficient planarian species | Q43500590 | ||
| Stem cell-dependent formation of a functional anterior regeneration pole in planarians requires Zic and Forkhead transcription factors. | Q43929265 | ||
| Multiple Wnts are involved in Hydra organizer formation and regeneration. | Q44643253 | ||
| Expression of vasa(vas)-related genes in germline cells and totipotent somatic stem cells of planarians | Q47992595 | ||
| Genome-wide analysis of the bHLH gene family in planarians identifies factors required for adult neurogenesis and neuronal regeneration | Q48036785 | ||
| A Bruno-like gene is required for stem cell maintenance in planarians | Q48085602 | ||
| SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells | Q48111456 | ||
| Smed-Evi/Wntless is required for beta-catenin-dependent and -independent processes during planarian regeneration. | Q51826212 | ||
| Isolation of planarian X-ray-sensitive stem cells by fluorescence-activated cell sorting | Q61447956 | ||
| The induction of cephalic differentiation in regenerating Dugesia dorotocephala in the presence of the normal head and in unwounded tails | Q79475777 | ||
| Smed-betacatenin-1 is required for anteroposterior blastema polarity in planarian regeneration | Q80156777 | ||
| edgeR: a Bioconductor package for differential expression analysis of digital gene expression data | Q27860819 | ||
| The Sequence Alignment/Map format and SAMtools | Q27860966 | ||
| Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA. | Q27938848 | ||
| Fundamentals of planarian regeneration | Q28286957 | ||
| BEDTools: a flexible suite of utilities for comparing genomic features | Q29547332 | ||
| ROCR: visualizing classifier performance in R | Q29615821 | ||
| Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells | Q29617430 | ||
| Wound repair and regeneration | Q29617949 | ||
| Cell death and tissue remodeling in planarian regeneration | Q30493560 | ||
| Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments. | Q30583219 | ||
| Initiating a regenerative response; cellular and molecular features of wound healing in the cnidarian Nematostella vectensis | Q30597611 | ||
| Spatial reconstruction of single-cell gene expression data | Q30930652 | ||
| The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration | Q31117991 | ||
| A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineages | Q33561621 | ||
| An integrative clustering and modeling algorithm for dynamical gene expression data | Q33936107 | ||
| Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets | Q34044099 | ||
| Expression of secreted Wnt pathway components reveals unexpected complexity of the planarian amputation response | Q34131150 | ||
| Cilia in the CNS: The Quiet Organelle Claims Center Stage | Q34173153 | ||
| Clonogenic Neoblasts Are Pluripotent Adult Stem Cells That Underlie Planarian Regeneration | Q34184695 | ||
| Neoblast specialization in regeneration of the planarian Schmidtea mediterranea. | Q34250398 | ||
| RNA-RNA interactions enable specific targeting of noncoding RNAs to nascent Pre-mRNAs and chromatin sites | Q34253195 | ||
| Full-length RNA-seq from single cells using Smart-seq2. | Q34395363 | ||
| Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types | Q34404570 | ||
| Comparative transcriptional profiling of the axolotl limb identifies a tripartite regeneration-specific gene program | Q34712348 | ||
| Smart-seq2 for sensitive full-length transcriptome profiling in single cells. | Q34993864 | ||
| The planarian regeneration transcriptome reveals a shared but temporally shifted regulatory program between opposing head and tail scenarios. | Q35044492 | ||
| Single-cell RNA-seq reveals dynamic paracrine control of cellular variation | Q35185544 | ||
| Wingful, an extracellular feedback inhibitor of Wingless | Q35776013 | ||
| A molecular wound response program associated with regeneration initiation in planarians | Q35945087 | ||
| Stem cell-based growth, regeneration, and remodeling of the planarian intestine | Q36375720 | ||
| An RNAi screen reveals intestinal regulators of branching morphogenesis, differentiation, and stem cell proliferation in planarians | Q36464769 | ||
| Tissue absence initiates regeneration through follistatin-mediated inhibition of activin signaling | Q37167016 | ||
| A wound-induced Wnt expression program controls planarian regeneration polarity. | Q37346221 | ||
| Constitutive gene expression and the specification of tissue identity in adult planarian biology | Q37890622 | ||
| Timing of gene expression responses to environmental changes | Q38356872 | ||
| P4510 | describes a project that uses | SMART-Seq | Q102534918 |
| P433 | issue | 5 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | single cell transcriptomics | Q105406038 |
| P1104 | number of pages | 14 | |
| P304 | page(s) | 632-645 | |
| P577 | publication date | 2015-12-01 | |
| P1433 | published in | Developmental Cell | Q1524277 |
| P1476 | title | A Generic and Cell-Type-Specific Wound Response Precedes Regeneration in Planarians | |
| P478 | volume | 35 |
| Q37321625 | A functional genomics screen in planarians reveals regulators of whole-brain regeneration. |
| Q36125919 | A transcriptional time-course analysis of oral vs. aboral whole-body regeneration in the Sea anemone Nematostella vectensis |
| Q47114372 | Acoel regeneration mechanisms indicate an ancient role for muscle in regenerative patterning |
| Q52315063 | Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics |
| Q52576606 | Cell type transcriptome atlas for the planarian Schmidtea mediterranea. |
| Q91506659 | Cell-type diversity and regionalized gene expression in the planarian intestine |
| Q64902038 | Cellular and Molecular Responses Unique to Major Injury Are Dispensable for Planarian Regeneration. |
| Q47444003 | Cellular, ultrastructural and molecular analyses of epidermal cell development in the planarian Schmidtea mediterranea. |
| Q57936550 | Comparative transcriptomic analyses and single-cell RNA sequencing of the freshwater planarian Schmidtea mediterranea identify major cell types and pathway conservation |
| Q37162242 | Conserved functional antagonism of CELF and MBNL proteins controls stem cell-specific alternative splicing in planarians |
| Q41899180 | Cytoplasmic poly (A)-binding protein critically regulates epidermal maintenance and turnover in the planarian Schmidtea mediterranea. |
| Q64389600 | DNA damage and tissue repair: What we can learn from planaria |
| Q60310172 | Danger signals activate a putative innate immune system during regeneration in a filamentous fungus |
| Q47226265 | Dissecting the function of Cullin-RING ubiquitin ligase complex genes in planarian regeneration. |
| Q30837695 | Embryonic origin of adult stem cells required for tissue homeostasis and regeneration. |
| Q37321695 | Essential role for the planarian intestinal GATA transcription factor in stem cells and regeneration |
| Q47381225 | FOX and ETS family transcription factors regulate the pigment cell lineage in planarians |
| Q55279724 | Flatworm-specific transcriptional regulators promote the specification of tegumental progenitors in Schistosoma mansoni. |
| Q47223131 | Generic wound signals initiate regeneration in missing-tissue contexts |
| Q42008240 | Girardia dorotocephala transcriptome sequence, assembly, and validation through characterization of piwi homologs and stem cell progeny markers |
| Q28073913 | Go ahead, grow a head! A planarian's guide to anterior regeneration |
| Q55008566 | High throughput measurement of metabolism in planarians reveals activation of glycolysis during regeneration. |
| Q48193397 | Hippo signaling controls cell cycle and restricts cell plasticity in planarians. |
| Q52373731 | Identification of multiple isomeric core chitobiose-modified high mannose and paucimannose N-glycans in the planarian Schmidtea mediterranea. |
| Q38870951 | In silico lineage tracing through single cell transcriptomics identifies a neural stem cell population in planarians |
| Q48306920 | Integrin suppresses neurogenesis and regulates brain tissue assembly in planarian regeneration. |
| Q36105211 | Molecular markers for X-ray-insensitive differentiated cells in the Inner and outer regions of the mesenchymal space in planarian Dugesia japonica. |
| Q64067726 | Muscle functions as a connective tissue and source of extracellular matrix in planarians |
| Q88107247 | Neoblast-enriched zinc finger protein FIR1 triggers local proliferation during planarian regeneration |
| Q39192301 | Nervous system development and regeneration in freshwater planarians. |
| Q37496365 | Neuronal sources of hedgehog modulate neurogenesis in the adult planarian brain |
| Q64283461 | Nuclear receptor NR4A is required for patterning at the ends of the planarian anterior-posterior axis |
| Q49717910 | Orthogonal muscle fibres have different instructive roles in planarian regeneration |
| Q38810344 | PHRED-1 is a divergent neurexin-1 homolog that organizes muscle fibers and patterns organs during regeneration |
| Q99205810 | Pattern regulation in a regenerating jellyfish |
| Q50450863 | Planarian Epidermal Stem Cells Respond to Positional Cues to Promote Cell-Type Diversity |
| Q89511615 | Poly(ADP-Ribose) Polymerase-3 Regulates Regeneration in Planarians |
| Q55434388 | Positional information specifies the site of organ regeneration and not tissue maintenance in planarians. |
| Q40075640 | Putrescine independent wound response phenotype is produced by ODC-like RNAi in planarians |
| Q38904259 | RUNX in Invertebrates |
| Q46311411 | SUMOylation controls stem cell proliferation and regional cell death through Hedgehog signaling in planarians. |
| Q38732766 | Scaling by shrinking: empowering single-cell 'omics' with microfluidic devices |
| Q46546508 | Single Cell Resolution of Human Hematoendothelial Cells Defines Transcriptional Signatures of Hemogenic Endothelium. |
| Q92373773 | Tau tubulin kinase is required for spermatogenesis and development of motile cilia in planarian flatworms |
| Q57025286 | The Cellular and Molecular Basis for Planarian Regeneration |
| Q91865532 | The Role of Early Bioelectric Signals in the Regeneration of Planarian Anterior/Posterior Polarity |
| Q38652947 | The abrogation of condensin function provides independent evidence for defining the self-renewing population of pluripotent stem cells. |
| Q90308460 | The exon junction complex is required for stem and progenitor cell maintenance in planarians |
| Q49821286 | The genome of Schmidtea mediterranea and the evolution of core cellular mechanisms |
| Q47887895 | The planarian TCF/LEF factor Smed-tcf1 is required for the regeneration of dorsal-lateral neuronal subtypes |
| Q37520810 | Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano |
| Q41483547 | Two FGFRL-Wnt circuits organize the planarian anteroposterior axis |
| Q39258584 | Utilizing the planarian voltage-gated ion channel transcriptome to resolve a role for a Ca2+ channel in neuromuscular function and regeneration |
| Q41047992 | Yorkie is required to restrict the injury responses in planarians |
| Q93343329 | foxF-1 Controls Specification of Non-body Wall Muscle and Phagocytic Cells in Planarians |
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