| scholarly article | Q13442814 |
| P819 | ADS bibcode | 2001PNAS...98.5688M |
| P356 | DOI | 10.1073/PNAS.091427698 |
| P932 | PMC publication ID | 33274 |
| P698 | PubMed publication ID | 11320215 |
| P5875 | ResearchGate publication ID | 12016305 |
| P50 | author | Laurent Duret | Q45812651 |
| P2093 | author name string | D Mouchiroud | |
| G Marais | |||
| P2860 | cites work | The effect of deleterious mutations on neutral molecular variation | Q24532876 |
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| Meiotic recombination, noncoding DNA and genomic organization in Caenorhabditis elegans | Q28769447 | ||
| Small introns tend to occur in GC-rich regions in some but not all vertebrates | Q33756079 | ||
| Coding sequence evolution | Q33801604 | ||
| Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis. | Q33858553 | ||
| The effects of Hill-Robertson interference between weakly selected mutations on patterns of molecular evolution and variation | Q33903943 | ||
| tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes | Q33945645 | ||
| Selection intensity for codon bias | Q33963554 | ||
| Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA. | Q33964399 | ||
| DNA synthesis errors associated with double-strand-break repair | Q33965497 | ||
| "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons | Q34049120 | ||
| Mutation pressure, natural selection, and the evolution of base composition in Drosophila | Q34067310 | ||
| Natural selection on synonymous sites is correlated with gene length and recombination in Drosophila. | Q34485645 | ||
| Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans | Q34610956 | ||
| FlyBase: a Drosophila database | Q34648738 | ||
| Codon usage bias and tRNA abundance in Drosophila | Q34743363 | ||
| Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae | Q35287931 | ||
| Clustering of meiotic double-strand breaks on yeast chromosome III | Q36769301 | ||
| Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases | Q40400353 | ||
| Codon catalog usage is a genome strategy modulated for gene expressivity | Q40495447 | ||
| DNA sequence evolution: the sounds of silence | Q40955511 | ||
| A genomic bias for genotype-environment interactions in C. elegans | Q41860839 | ||
| Divergence of the yellow gene between Drosophila melanogaster and D. subobscura: recombination rate, codon bias and synonymous substitutions | Q42967866 | ||
| Coevolution of codon usage and transfer RNA abundance | Q43851327 | ||
| Intron size and natural selection | Q47255836 | ||
| Evolutionary rate of a gene affected by chromosomal position | Q47923860 | ||
| Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster | Q52443577 | ||
| Genetic recombination. Patterns in the genome. | Q52541664 | ||
| Reduced natural selection associated with low recombination in Drosophila melanogaster. | Q52544500 | ||
| Different base/base mispairs are corrected with different efficiencies and specificities in monkey kidney cells. | Q52868583 | ||
| Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons. | Q52869275 | ||
| Codon usage determines translation rate in Escherichia coli | Q69088273 | ||
| Recombination and mammalian genome evolution | Q70469993 | ||
| Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting tran | Q71440469 | ||
| The effect of linkage on limits to artificial selection | Q72951099 | ||
| The neutralist, the fly and the selectionist | Q77420805 | ||
| GenBank | Q77660442 | ||
| P433 | issue | 10 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 5688-5692 | |
| P577 | publication date | 2001-04-24 | |
| P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
| P1476 | title | Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes | |
| P478 | volume | 98 |
| Q37254768 | A comparison of synonymous codon usage bias patterns in DNA and RNA virus genomes: quantifying the relative importance of mutational pressure and natural selection |
| Q33797921 | A simple model for the influence of meiotic conversion tracts on GC content |
| Q52036042 | Accounting for background nucleotide composition when measuring codon usage bias. |
| Q34720773 | Analysis of codon usage pattern in Taenia saginata based on a transcriptome dataset |
| Q33582050 | Analysis of transcriptome data reveals multifactor constraint on codon usage in Taenia multiceps |
| Q53071272 | Biased gene conversion affects patterns of codon usage and amino acid usage in the Saccharomyces sensu stricto group of yeasts. |
| Q35152220 | Biased gene conversion: implications for genome and sex evolution |
| Q33301224 | Co-expression of adjacent genes in yeast cannot be simply attributed to shared regulatory system |
| Q36497395 | Codon Usage Bias and Determining Forces in Taenia solium Genome |
| Q35163216 | Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus |
| Q46773743 | Codon bias and noncoding GC content correlate negatively with recombination rate on the Drosophila X chromosome |
| Q35496034 | Codon usage and codon context bias in Xanthophyllomyces dendrorhous |
| Q34613752 | Codon usage bias covaries with expression breadth and the rate of synonymous evolution in humans, but this is not evidence for selection |
| Q34033113 | Codon usage bias: causative factors, quantification methods and genome-wide patterns: with emphasis on insect genomes |
| Q34616488 | Context dependence of meiotic recombination hotspots in yeast: the relationship between recombination activity of a reporter construct and base composition |
| Q30774412 | Correlated evolution of synonymous and nonsynonymous sites in Drosophila |
| Q56887724 | Current Awareness on Comparative and Functional Genomics |
| Q35080849 | Degeneration in codon usage within the region of suppressed recombination in the mating-type chromosomes of Neurospora tetrasperma. |
| Q33567600 | Developmental stage and level of codon usage bias in Drosophila |
| Q56994169 | Does the Recombination Rate Affect the Efficiency of Purifying Selection? The Yeast Genome Provides a Partial Answer |
| Q37341247 | Effect of exonic splicing regulation on synonymous codon usage in alternatively spliced exons of Dscam |
| Q36263760 | Effect of mutation mechanisms on variant composition and distribution in Caenorhabditis elegans |
| Q34565874 | Effective population size does not predict codon usage bias in mammals |
| Q41843218 | Elevated levels of expression associated with regions of the Drosophila genome that lack crossing over |
| Q92909264 | Elucidation of Codon Usage Signatures across the Domains of Life |
| Q37397487 | Estimating selection intensity on synonymous codon usage in a nonequilibrium population |
| Q37357213 | Estimation of fine-scale recombination intensity variation in the white-echinus interval of D. melanogaster |
| Q33950030 | Evaluation of methods for detecting recombination from DNA sequences: computer simulations |
| Q34176249 | Evidence for co-evolution of gene order and recombination rate |
| Q34713978 | Evidence for stabilizing selection on codon usage in chromosomal rearrangements of Drosophila pseudoobscura. |
| Q34277190 | Evidence for widespread GC-biased gene conversion in eukaryotes. |
| Q34261218 | Evidence for widespread positive and negative selection in coding and conserved noncoding regions of Capsella grandiflora. |
| Q33761705 | Evidence that natural selection on codon usage in Drosophila pseudoobscura varies across codons |
| Q39301374 | Evolution of codon usage in Zika virus genomes is host and vector specific |
| Q36052327 | Evolution of gene sequence in response to chromosomal location. |
| Q46831271 | Evolutionary analysis of the CACTA DNA-transposon Caspar across wheat species using sequence comparison and in situ hybridization |
| Q46034913 | Evolutionary genomics: codon bias and selection on single genomes. |
| Q35113805 | Exceptionally high levels of recombination across the honey bee genome. |
| Q45905130 | Factors affecting mito-nuclear codon usage interactions in the OXPHOS system of Drosophila melanogaster. |
| Q43562897 | Factors affecting polymorphism at microsatellite loci in bread wheat [ Triticum aestivum (L.) Thell]: effects of mutation processes and physical distance from the centromere |
| Q40307615 | Factors affecting synonymous codon usage bias in chloroplast genome of oncidium gower ramsey |
| Q43718816 | Fine-scale crossover rate heterogeneity in Drosophila pseudoobscura. |
| Q36054073 | Fine-scale population recombination rates, hotspots, and correlates of recombination in the Medicago truncatula genome. |
| Q33585838 | Functional and evolutionary correlates of gene constellations in the Drosophila melanogaster genome that deviate from the stereotypical gene architecture |
| Q37351818 | GC content and recombination: reassessing the causal effects for the Saccharomyces cerevisiae genome |
| Q38601536 | GC-biased gene conversion links the recombination landscape and demography to genomic base composition: GC-biased gene conversion drives genomic base composition across a wide range of species |
| Q34587185 | GC-biased segregation of noncoding polymorphisms in Drosophila |
| Q37273284 | Gene Evolutionary Trajectories and GC Patterns Driven by Recombination in Zea mays. |
| Q34420781 | Gene expression and molecular evolution |
| Q92456014 | Genetic analysis and evolutionary changes of Porcine circovirus 2 |
| Q52565499 | Genetic and evolutionary analysis of emerging H3N2 canine influenza virus. |
| Q52710043 | Genetic and evolutionary correlates of fine-scale recombination rate variation in Drosophila persimilis. |
| Q37421280 | Genome differentiation of Drosophila melanogaster from a microclimate contrast in Evolution Canyon, Israel |
| Q52602648 | Genome evolution: recombination speeds up adaptive evolution. |
| Q28828556 | Genome-Wide Analysis of Codon Usage Bias in Epichloë festucae |
| Q35755118 | Genomic analysis of codon usage shows influence of mutation pressure, natural selection, and host features on Marburg virus evolution |
| Q52968376 | Genomic choice of codons in 16 microbial species. |
| Q34570725 | Genomic heterogeneity of background substitutional patterns in Drosophila melanogaster |
| Q34016365 | Genomic sequence around butterfly wing development genes: annotation and comparative analysis. |
| Q27028044 | Genomic signatures of selection at linked sites: unifying the disparity among species |
| Q33870536 | Glucose lowering effect of transgenic human insulin-like growth factor-I from rice: in vitro and in vivo studies |
| Q36558250 | High degree of single nucleotide polymorphisms in California Culex pipiens (Diptera: Culicidae) sensu lato |
| Q52965913 | High mutation rate and predominance of insertions in the Caenorhabditis elegans nuclear genome. |
| Q52598671 | Hill-Robertson interference is a minor determinant of variations in codon bias across Drosophila melanogaster and Caenorhabditis elegans genomes. |
| Q34750287 | Human SNP variability and mutation rate are higher in regions of high recombination |
| Q90608375 | Impact of Mutation Rate and Selection at Linked Sites on DNA Variation across the Genomes of Humans and Other Homininae |
| Q64895310 | In Silico Analyses of Burial Codon Bias Among the Species of Dipterocarpaceae Through Molecular and Phylogenetic Data. |
| Q36480397 | Inferences of demography and selection in an African population of Drosophila melanogaster |
| Q58703500 | Insights into the genetic and host adaptability of emerging porcine circovirus 3 |
| Q34135136 | Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution |
| Q34614331 | Interactions between natural selection, recombination and gene density in the genes of Drosophila. |
| Q34569464 | Intragenic spatial patterns of codon usage bias in prokaryotic and eukaryotic genomes |
| Q39269867 | Intraspecific DNA variation in nuclear genes of the mosquito Aedes aegypti |
| Q41623681 | Introgression of Shoot Fly (Atherigona soccata L. Moench) Resistance QTLs into Elite Post-rainy Season Sorghum Varieties Using Marker Assisted Backcrossing (MABC). |
| Q34644075 | Intron size correlates positively with recombination rate in Caenorhabditis elegans |
| Q34619172 | Linkage disequilibrium patterns across a recombination gradient in African Drosophila melanogaster |
| Q34160190 | Linkage limits the power of natural selection in Drosophila |
| Q51983945 | Measuring the coding potential of genomic sequences through a combination of triplet occurrence patterns and RNY preference. |
| Q40899830 | Meiosis-specific yeast Hop1 protein promotes synapsis of double-stranded DNA helices via the formation of guanine quartets |
| Q33260766 | Minor shift in background substitutional patterns in the Drosophila saltans and willistoni lineages is insufficient to explain GC content of coding sequences |
| Q35044415 | Molecular adaptation of telomere associated genes in mammals |
| Q40544874 | Molecular correlates of genes exhibiting RNAi phenotypes in Caenorhabditis elegans |
| Q46870057 | Molecular identification of Heterakis spumosa obtained from brown rats (Rattus norvegicus) in Japan and its infectivity in experimental mice. |
| Q35570224 | Mutation bias is the driving force of codon usage in the Gallus gallus genome |
| Q48159466 | Mutation exposed: a neutral explanation for extreme base composition of an endosymbiont genome |
| Q91686151 | Nucleotide composition affects codon usage toward the 3'-end |
| Q46427480 | Nucleotide composition and codon usage bias of SRY gene |
| Q34587163 | Nucleotide polymorphism and linkage disequilibrium in wild populations of the partial selfer Caenorhabditis elegans |
| Q33512934 | Patterns of DNA-sequence divergence between Drosophila miranda and D. pseudoobscura |
| Q28768943 | Patterns of selection against transposons inferred from the distribution of Tc1, Tc3 and Tc5 insertions in the mut-7 line of the nematode Caenorhabditis elegans |
| Q34573540 | Patterns of synonymous codon usage in Drosophila melanogaster genes with sex-biased expression |
| Q44870531 | Population genomic analysis reveals no evidence for GC-biased gene conversion in Drosophila melanogaster |
| Q35914186 | RF-DYMHC: detecting the yeast meiotic recombination hotspots and coldspots by random forest model using gapped dinucleotide composition features |
| Q39535638 | Recent and Long-Term Selection Across Synonymous Sites in Drosophila ananassae. |
| Q24805150 | Recombination and base composition: the case of the highly self-fertilizing plant Arabidopsis thaliana |
| Q35125401 | Recombination has little effect on the rate of sequence divergence in pseudoautosomal boundary 1 among humans and great apes |
| Q21563525 | Recombination modulates how selection affects linked sites in Drosophila |
| Q35004313 | Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome |
| Q37889637 | Recombination rate variation in closely related species. |
| Q34619011 | Recombination, dominance and selection on amino acid polymorphism in the Drosophila genome: contrasting patterns on the X and fourth chromosomes |
| Q42852154 | Reduced efficacy of selection in regions of the Drosophila genome that lack crossing over |
| Q90322713 | Runaway GC evolution in gerbil genomes |
| Q73914905 | Selection conflicts, gene expression, and codon usage trends in yeast |
| Q81030742 | Selection on codon usage for error minimization at the protein level |
| Q51940054 | Significant positive correlation between the recombination rate and GC content in the human pseudoautosomal region. |
| Q41993524 | Specific modifications of histone tails, but not DNA methylation, mirror the temporal variation of mammalian recombination hotspots |
| Q37324360 | Strong evidence for lineage and sequence specificity of substitution rates and patterns in Drosophila |
| Q35038810 | Strong regional heterogeneity in base composition evolution on the Drosophila X chromosome |
| Q44433658 | Studying patterns of recent evolution at synonymous sites and intronic sites in Drosophila melanogaster |
| Q35111424 | Substitution patterns are GC-biased in divergent sequences across the metazoans |
| Q33241196 | Support vector machine for classification of meiotic recombination hotspots and coldspots in Saccharomyces cerevisiae based on codon composition |
| Q34007952 | Surprising fitness consequences of GC-biased gene conversion: I. Mutation load and inbreeding depression |
| Q48298892 | Synonymous Codon Usage Controls Various Molecular Aspects. |
| Q35058591 | Synonymous codon usage in TTSuV2: analysis and comparison with TTSuV1 |
| Q36945540 | The Hill-Robertson effect: evolutionary consequences of weak selection and linkage in finite populations |
| Q40931336 | The Landscape of Realized Homologous Recombination in Pathogenic Bacteria. |
| Q40208191 | The Time Scale of Recombination Rate Evolution in Great Apes |
| Q42597628 | The correlation between recombination rate and dinucleotide bias in Drosophila melanogaster |
| Q38025117 | The evolution of novelty in conserved gene families |
| Q28742625 | The impact of recombination on dN/dS within recently emerged bacterial clones |
| Q33332585 | The impact of recombination on nucleotide substitutions in the human genome |
| Q36312128 | The many landscapes of recombination in Drosophila melanogaster |
| Q34420764 | The neutral theory in the genomic era. |
| Q28607538 | The relationship of recombination rate, genome structure, and patterns of molecular evolution across angiosperms |
| Q35867677 | The sex-specific impact of meiotic recombination on nucleotide composition. |
| Q33868221 | The surprising negative correlation of gene length and optimal codon use--disentangling translational selection from GC-biased gene conversion in yeast. |
| Q47200234 | The transition to self-compatibility in Arabidopsis thaliana and evolution within S-haplotypes over 10 Myr. |
| Q38080742 | Three independent determinants of protein evolutionary rate |
| Q34541414 | Through a genome, darkly: comparative analysis of plant chromosomal DNA. |
| Q34618276 | Translational selection and yeast proteome evolution |
| Q52662835 | Transposable element orientation bias in the Drosophila melanogaster genome. |
| Q34324210 | Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots". |
| Q44849961 | Variation in recombination frequency and distribution across eukaryotes: patterns and processes |
| Q52664021 | Variation in synonymous codon use and DNA polymorphism within the Drosophila genome. |
| Q34598376 | Weak selection and recent mutational changes influence polymorphic synonymous mutations in humans |
| Q34588961 | X-linked genes evolve higher codon bias in Drosophila and Caenorhabditis |
| Q55513264 | iRSpot-Pse6NC: Identifying recombination spots in Saccharomyces cerevisiae by incorporating hexamer composition into general PseKNC. |
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