Mapping Variation in Cellular and Transcriptional Response to 1,25-Dihydroxyvitamin D3 in Peripheral Blood Mononuclear Cells

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Mapping Variation in Cellular and Transcriptional Response to 1,25-Dihydroxyvitamin D3 in Peripheral Blood Mononuclear Cells is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2016PLoSO..1159779K
P356DOI10.1371/JOURNAL.PONE.0159779
P932PMC publication ID4959717
P698PubMed publication ID27454520

P50authorAnne I SperlingQ57334498
Silvia N KariukiQ59542110
Shigeki NakagomeQ43985308
P2093author name stringAnna Di Rienzo
David B Witonsky
Choongwon Jeong
Joseph C Maranville
Cara L Hrusch
Shaneen S Baxter
P2860cites workA flexible and accurate genotype imputation method for the next generation of genome-wide association studiesQ21129496
Model-based analysis of ChIP-Seq (MACS)Q21183902
An integrated encyclopedia of DNA elements in the human genomeQ22122150
An integrated map of genetic variation from 1,092 human genomesQ22122153
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel diseaseQ22251082
Identification of a novel chemokine (CCL28), which binds CCR10 (GPR2)Q22253984
Shared as well as distinct roles of EHD proteins revealed by biochemical and functional comparisons in mammalian cells and C. elegansQ24293442
A zinc finger HIT domain-containing protein, ZNHIT-1, interacts with orphan nuclear hormone receptor Rev-erbbeta and removes Rev-erbbeta-induced inhibition of apoCIII transcriptionQ24294901
A nuclear factor for IL-6 expression (NF-IL6) is a member of a C/EBP familyQ24310416
Interaction of polyadenylate-binding protein with the eIF4G homologue PAIP enhances translationQ24336547
Inference of population structure using multilocus genotype dataQ24548114
The NHGRI GWAS Catalog, a curated resource of SNP-trait associationsQ24568334
GATA3 and the T-cell lineage: essential functions before and after T-helper-2-cell differentiationQ24569631
Common genetic determinants of vitamin D insufficiency: a genome-wide association studyQ24602058
Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosisQ24635370
Statistical significance for genomewide studiesQ24681264
The Sequence Alignment/Map format and SAMtoolsQ27860966
A novel chemokine ligand for CCR10 and CCR3 expressed by epithelial cells in mucosal tissuesQ28137982
TREM-1 (triggering receptor expressed on myeloid cells): a new player in acute inflammatory responsesQ28177538
CCL28 has dual roles in mucosal immunity as a chemokine with broad-spectrum antimicrobial activityQ28204353
Intake of vitamin D and risk of type 1 diabetes: a birth-cohort studyQ28204926
ZNF649, a novel Kruppel type zinc-finger protein, functions as a transcriptional suppressorQ28255856
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortiaQ28274448
The Hippo-YAP pathway in organ size control and tumorigenesis: an updated versionQ28281214
Genome-wide analyses of transcription factor GATA3-mediated gene regulation in distinct T cell typesQ28591395
The Genotype-Tissue Expression (GTEx) projectQ28657968
Evaluation of a partial genome screening of two asthma susceptibility regions using bayesian network based bayesian multilevel analysis of relevanceQ28731302
Safety and T cell modulating effects of high dose vitamin D3 supplementation in multiple sclerosisQ28744264
Variant of transcription factor 7-like 2 (TCF7L2) gene confers risk of type 2 diabetesQ29614589
lumi: a pipeline for processing Illumina microarrayQ29614924
AP-1 as a regulator of cell life and deathQ29616558
AP-1 function and regulationQ29618422
Nonclassic actions of vitamin DQ33375907
The impact of vitamin D on dendritic cell function in patients with systemic lupus erythematosusQ33532591
1,25-Dihydroxyvitamin D3 and IL-2 combine to inhibit T cell production of inflammatory cytokines and promote development of regulatory T cells expressing CTLA-4 and FoxP3.Q33606850
A genome-wide gene-environment interaction analysis for tobacco smoke and lung cancer susceptibility.Q33827693
Interactions between glucocorticoid treatment and cis-regulatory polymorphisms contribute to cellular response phenotypesQ33959230
Vitamin D: modulator of the immune system.Q34112707
A ChIP-seq defined genome-wide map of vitamin D receptor binding: associations with disease and evolutionQ34153604
High-dose vitamin D(3) during intensive-phase antimicrobial treatment of pulmonary tuberculosis: a double-blind randomised controlled trialQ34158057
C/EBP beta regulation of the tumor necrosis factor alpha geneQ34188989
Willin/FRMD6 expression activates the Hippo signaling pathway kinases in mammals and antagonizes oncogenic YAP.Q34191953
Effect of race and genetics on vitamin D metabolism, bone and vascular healthQ34280570
Sherlock: detecting gene-disease associations by matching patterns of expression QTL and GWASQ34342875
Vitamin D: its role and uses in immunologyQ34451101
Evidence for an Association Between Vitamin D and Multiple SclerosisQ34453560
A single dose of vitamin D enhances immunity to mycobacteriaQ34623455
Vitamin D receptor ChIP-seq in primary CD4+ cells: relationship to serum 25-hydroxyvitamin D levels and autoimmune diseaseQ34815644
Vitamin D as supplementary treatment for tuberculosis: a double-blind, randomized, placebo-controlled trial.Q34932689
A randomized controlled trial of vitamin D3 supplementation for the prevention of symptomatic upper respiratory tract infectionsQ34964853
Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20.Q34986752
Comparison of cellular and transcriptional responses to 1,25-dihydroxyvitamin d3 and glucocorticoids in peripheral blood mononuclear cellsQ35014780
New insights into the mechanisms of vitamin D actionQ35063585
Patterns of genome-wide VDR locations.Q35161248
Vitamin D and the immune systemQ35194610
Alterations in TCF7L2 expression define its role as a key regulator of glucose metabolismQ35195941
The pleiotropic actions of vitamin D.Q35616572
Modulatory effects of 1,25-dihydroxyvitamin D3 on human B cell differentiation.Q51973496
GORAB Missense Mutations Disrupt RAB6 and ARF5 Binding and Golgi Targeting.Q52866332
Vitamin D and multiple sclerosisQ54073705
Rare variants in the CYP27B1 gene are associated with multiple sclerosis.Q55055441
The Role of C/EBP Isoforms in the Control of Inflammatory and Native Immunity FunctionsQ57272895
1,25-Dihydroxyvitamin D3 suppresses human T helper/inducer lymphocyte activity in vitroQ67280107
Decreased accessory cell function and costimulatory activity by 1,25-dihydroxyvitamin D3-treated monocytesQ67531150
CCAAT/enhancer binding protein is involved in the expression of the tumour necrosis factor gene in human monocytesQ71311025
The phenotype caused by PYCR1 mutations corresponds to geroderma osteodysplasticum rather than autosomal recessive cutis laxa type 2Q83120958
Inhibition of PCSK6 may play a protective role in the development of rheumatoid arthritisQ86078744
Nuclear hormone 1α,25-dihydroxyvitamin D3 elicits a genome-wide shift in the locations of VDR chromatin occupancyQ35620895
Genome-wide and gene-based association implicates FRMD6 in Alzheimer diseaseQ35888898
Matrix eQTL: ultra fast eQTL analysis via large matrix operationsQ35947630
Factors predicting vitamin D response variation in non-Hispanic white postmenopausal womenQ36134708
Vitamin D deficiency in systemic lupus erythematosusQ36375703
Patterns of Transcriptional Response to 1,25-Dihydroxyvitamin D3 and Bacterial Lipopolysaccharide in Primary Human MonocytesQ36867923
Predictors of serum vitamin D levels in African American and European American men in ChicagoQ36919008
1 alpha,25-dihydroxyvitamin D3 suppresses proliferation and immunoglobulin production by normal human peripheral blood mononuclear cellsQ36993676
Genetic mapping with multiple levels of phenotypic information reveals determinants of lymphocyte glucocorticoid sensitivityQ37217063
Vitamin D in systemic lupus erythematosusQ37242340
A role for EHD4 in the regulation of early endosomal transportQ37481611
Vitamin D, blood pressure, and African Americans: toward a unifying hypothesisQ37774797
Effects of vitamin D on the peripheral adaptive immune system: a reviewQ37881236
Chromatin acetylation at transcription start sites and vitamin D receptor binding regions relates to effects of 1α,25-dihydroxyvitamin D3 and histone deacetylase inhibitors on gene expressionQ39254258
Immunomodulatory effects of Vitamin D in multiple sclerosisQ39868289
TCF7L2 is reproducibly associated with type 2 diabetes in various ethnic groups: a global meta-analysisQ40216751
Inter-ethnic differences in lymphocyte sensitivity to glucocorticoids reflect variation in transcriptional responseQ42105299
Vitamin D status: United States, 2001-2006.Q43975117
Vitamin D supplementation and regulatory T cells in apparently healthy subjects: vitamin D treatment for autoimmune diseases?Q44104154
ERF and ETV3L are retinoic acid-inducible repressors required for primary neurogenesis.Q46012931
Vitamin D intake to attain a desired serum 25-hydroxyvitamin D concentrationQ46299751
Vitamin D3 Induces Tolerance in Human Dendritic Cells by Activation of Intracellular Metabolic PathwaysQ49160110
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P304page(s)e0159779
P577publication date2016-07-25
P1433published inPLOS OneQ564954
P1476titleMapping Variation in Cellular and Transcriptional Response to 1,25-Dihydroxyvitamin D3 in Peripheral Blood Mononuclear Cells
P478volume11

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cites work (P2860)
Q46129739Association between preoperative peripheral blood mononuclear cell gene expression profiles, early postoperative organ function recovery potential and long-term survival in advanced heart failure patients undergoing mechanical circulatory support.
Q42214404Colonic transcriptional response to 1α,25(OH)2 vitamin D3 in African- and European-Americans
Q104064732Common and personal target genes of the micronutrient vitamin D in primary immune cells from human peripheral blood

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