Genome-wide association study (GWAS) reveals the genetic architecture of four husk traits in maize

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Genome-wide association study (GWAS) reveals the genetic architecture of four husk traits in maize is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1048524996
P356DOI10.1186/S12864-016-3229-6
P932PMC publication ID5117540
P698PubMed publication ID27871222

P2093author name stringJing Li
Yan He
Xiaohong Yang
Ao Zhang
Jinhong Luo
Yanye Ruan
Zhenhai Cui
Chuangye Qi
P2860cites workThe Membrane-Associated Sec1/Munc18 KEULE is Required for Phragmoplast Microtubule Reorganization During Cytokinesis in ArabidopsisQ52893145
Utility of RNA Sequencing for Analysis of Maize Reproductive TranscriptomesQ59240982
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Regulation of membrane trafficking, cytoskeleton dynamics, and cell polarity by ROP/RAC GTPasesQ81739907
Functional analysis of corn husk photosynthesisQ83929632
Dynamic transcriptome landscape of maize embryo and endosperm developmentQ87411470
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Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maizeQ24675282
PLINK: a tool set for whole-genome association and population-based linkage analysesQ24677407
Redox regulation of plant developmentQ27003988
Vps52p, Vps53p, and Vps54p form a novel multisubunit complex required for protein sorting at the yeast late GolgiQ27932636
Rab GTPases as coordinators of vesicle trafficQ28131746
A species of small antisense RNA in posttranscriptional gene silencing in plantsQ28146107
Genome-Wide Association Studies Identified Three Independent Polymorphisms Associated with α-Tocopherol Content in Maize KernelsQ28483735
A genome-wide scan for evidence of selection in a maize population under long-term artificial selection for ear numberQ28657944
Spatial dynamics of receptor-mediated endocytic trafficking in budding yeast revealed by using fluorescent alpha-factor derivativesQ30477248
Membrane trafficking. The specificity of vesicle traffic to the Golgi is encoded in the golgin coiled-coil proteinsQ30604578
Unraveling the KNOTTED1 regulatory network in maize meristems.Q33354055
Genome-wide transcript analysis of early maize leaf development reveals gene cohorts associated with the differentiation of C4 Kranz anatomy.Q33355813
Plant hormone cross-talk: the pivot of root growthQ33359942
Organogenesis in plants: initiation and elaboration of leavesQ33360751
The Maize Leaf: Another Perspective on Growth RegulationQ33361746
Genetic control of morphometric diversity in the maize shoot apical meristemQ33361944
An ultra-high density bin-map for rapid QTL mapping for tassel and ear architecture in a large F₂ maize population.Q33764137
Adaptor protein complexes and intracellular transportQ33964846
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.Q34504872
Linkage mapping of 1454 new maize candidate gene LociQ34573446
Maize adaptation to temperate climate: relationship between population structure and polymorphism in the Dwarf8 geneQ34588465
Corn husk as a potential source of anthocyaninsQ34879525
Genome-wide analysis of ZmDREB genes and their association with natural variation in drought tolerance at seedling stage of Zea mays L.Q35004508
Dihydroxyacid dehydratase is important for gametophyte development and disruption causes increased susceptibility to salinity stress in ArabidopsisQ35063430
RNA-mediated epigenetic regulation of gene expressionQ35223649
Genome wide association studies using a new nonparametric model reveal the genetic architecture of 17 agronomic traits in an enlarged maize association panelQ35247899
Sucrose metabolism: regulatory mechanisms and pivotal roles in sugar sensing and plant developmentQ35768788
Flowering time in maize: linkage and epistasis at a major effect locus.Q35863137
A G protein alpha null mutation confers prolificacy potential in maizeQ35867017
Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasetsQ35886287
Transcriptional repression by MYB3R proteins regulates plant organ growth.Q36000823
Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maizeQ36061573
Genome-Wide Association Study Reveals the Genetic Basis of Stalk Cell Wall Components in MaizeQ36091798
A transposable element in a NAC gene is associated with drought tolerance in maize seedlingsQ36128745
RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genomeQ36331974
The how and why of exocytic vesiclesQ36362785
Genetic association mapping and genome organization of maizeQ36407742
OsERF2 controls rice root growth and hormone responses through tuning expression of key genes involved in hormone signaling and sucrose metabolismQ36474884
Histone deacetylases and mechanisms of regulation of gene expressionQ36734390
Combined Linkage and Association Mapping Reveals QTL and Candidate Genes for Plant and Ear Height in Maize.Q37004929
Genome-Wide Association Study Identifies Candidate Genes for Starch Content Regulation in Maize KernelsQ37127663
CACTA-like transposable element in ZmCCT attenuated photoperiod sensitivity and accelerated the postdomestication spread of maizeQ37240512
Joint-linkage mapping and GWAS reveal extensive genetic loci that regulate male inflorescence size in maizeQ37344093
Fine mapping and haplotype structure analysis of a major flowering time quantitative trait locus on maize chromosome 10.Q37454662
Towards mechanistic models of plant organ growthQ37988783
Clathrin and post-Golgi trafficking: a very complicated issue.Q38164981
The plant secretory pathway: an essential factory for building the plant cell wallQ38176744
Plant vacuolar trafficking driven by RAB and SNARE proteinsQ38280486
Differential nuclease sensitivity profiling of chromatin reveals biochemical footprints coupled to gene expression and functional DNA elements in maizeQ38303257
Ribosome profiling reveals dynamic translational landscape in maize seedlings under drought stress.Q39169184
TASSEL: software for association mapping of complex traits in diverse samplesQ39512996
Genetic variation in ZmVPP1 contributes to drought tolerance in maize seedlingsQ39576345
Rare genetic variation at Zea mays crtRB1 increases beta-carotene in maize grainQ39611835
PHYTOPLANKTON COMMUNITY COMPOSITION AND GENE EXPRESSION OF FUNCTIONAL GENES INVOLVED IN CARBON AND NITROGEN ASSIMILATION(1).Q40023985
Genome-wide comparative analysis of digital gene expression tag profiles during maize ear developmentQ40270114
Membrane recycling by coated vesiclesQ40313060
Auxin metabolism rates and implications for plant developmentQ41102191
Leaves of grass: focusing phenomics on maize leaf growthQ42277647
Cellulose Synthase-Like D1 is integral to normal cell division, expansion, and leaf development in maizeQ42498128
RNA sequencing reveals the complex regulatory network in the maize kernelQ45362175
Genome-wide association study (GWAS) of resistance to head smut in maizeQ46440810
Genome-wide dissection of the maize ear genetic architecture using multiple populationsQ46513566
The putative Arabidopsis homolog of yeast vps52p is required for pollen tube elongation, localizes to Golgi, and might be involved in vesicle traffickingQ47244921
Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernelsQ48042150
Characterization of Biosynthetic Pathways for the Production of the Volatile Homoterpenes DMNT and TMTT in Zea maysQ48337587
The stay-green phenotype of wheat mutant tasg1 is associated with altered cytokinin metabolismQ50237611
Transcriptional regulation of ROS controls transition from proliferation to differentiation in the rootQ51553227
Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasmQ51578137
Critical environmental and genotypic factors for Fusarium verticillioides infection, fungal growth and fumonisin contamination in maize grown in northwestern Spain.Q52767465
P4510describes a project that usesgenome-wide association studyQ1098876
edgeRQ113334690
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectgenome-wide association studyQ1098876
P304page(s)946
P577publication date2016-11-21
P1433published inBMC GenomicsQ15765854
P1476titleGenome-wide association study (GWAS) reveals the genetic architecture of four husk traits in maize
P478volume17

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cites work (P2860)
Q59800072Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat
Q95326160Denser Markers and Advanced Statistical Method Identified More Genetic Loci Associated with Husk Traits in Maize
Q90430146Genetic Diversity and Genome-Wide Association Study of Major Ear Quantitative Traits Using High-Density SNPs in Maize
Q92100560Genetic architecture of maize chlorotic mottle virus and maize lethal necrosis through GWAS, linkage analysis and genomic prediction in tropical maize germplasm
Q58713599Genetic characterization of inbred lines from Shaan A and B groups for identifying loci associated with maize grain yield
Q97644546Genome-Wide Association Study Dissects the Genetic Architecture of Maize Husk Tightness
Q48352720Genome-wide association analysis of lead accumulation in maize.
Q104473908Genome-wide association studies in tropical maize germplasm reveal novel and known genomic regions for resistance to Northern corn leaf blight
Q55439866Identification and validation of genomic regions influencing kernel zinc and iron in maize.
Q90457641Linkage mapping combined with association analysis reveals QTL and candidate genes for three husk traits in maize
Q90264618PANOMICS meets Germplasm

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