| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1032919628 |
| P356 | DOI | 10.1038/NRG3863 |
| P932 | PMC publication ID | 4376354 |
| P698 | PubMed publication ID | 25554358 |
| P5875 | ResearchGate publication ID | 270288239 |
| P2093 | author name string | Danesh Moazed | |
| Daniel Holoch | |||
| P2860 | cites work | A large fraction of extragenic RNA pol II transcription sites overlap enhancers | Q21145794 |
| 2-D structure of the A region of Xist RNA and its implication for PRC2 association | Q21145807 | ||
| Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs | Q24299641 | ||
| RNAi-mediated targeting of heterochromatin by the RITS complex | Q24623437 | ||
| RNA polymerase V transcription guides ARGONAUTE4 to chromatin | Q24653430 | ||
| Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs | Q24673619 | ||
| A chromosomal memory triggered by Xist regulates histone methylation in X inactivation | Q24802695 | ||
| The noncoding RNA revolution-trashing old rules to forge new ones | Q26851952 | ||
| Small but sturdy: small RNAs in cellular memory and epigenetics | Q26864750 | ||
| A pre-mRNA-associating factor links endogenous siRNAs to chromatin regulation | Q27336267 | ||
| The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes | Q27642580 | ||
| Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes | Q27657724 | ||
| Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1 | Q27677956 | ||
| SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation | Q27681459 | ||
| Molecular Mechanism of Action of Plant DRM De Novo DNA Methyltransferases | Q27683907 | ||
| Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing | Q27684914 | ||
| Genome regulation by long noncoding RNAs. | Q27691812 | ||
| RNA interference is mediated by 21- and 22-nucleotide RNAs | Q27860764 | ||
| Role for a bidentate ribonuclease in the initiation step of RNA interference | Q27860832 | ||
| Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans | Q27860867 | ||
| Passenger-strand cleavage facilitates assembly of siRNA into Ago2-containing RNAi enzyme complexes | Q28115751 | ||
| A microRNA in a multiple-turnover RNAi enzyme complex | Q28131835 | ||
| An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus | Q28138068 | ||
| Potato virus X amplicons in arabidopsis mediate genetic and epigenetic gene silencing | Q28138513 | ||
| RNA-DNA interactions and DNA methylation in post-transcriptional gene silencing | Q28139729 | ||
| A species of small antisense RNA in posttranscriptional gene silencing in plants | Q28146107 | ||
| Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi | Q28218870 | ||
| A conserved motif in Argonaute-interacting proteins mediates functional interactions through the Argonaute PIWI domain | Q28250307 | ||
| Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain | Q28262499 | ||
| RNA silencing in plants | Q28282572 | ||
| RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing | Q28287265 | ||
| A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila | Q28290099 | ||
| Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila | Q28292093 | ||
| Small RNAs in transcriptional gene silencing and genome defence | Q28307317 | ||
| MIWI2 is essential for spermatogenesis and repression of transposons in the mouse male germline | Q28507423 | ||
| A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice | Q28511242 | ||
| DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes | Q28513286 | ||
| Genome-wide Identification of Polycomb-Associated RNAs by RIP-seq | Q28513635 | ||
| A Rik1-associated, cullin-dependent E3 ubiquitin ligase is essential for heterochromatin formation | Q28769568 | ||
| The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements | Q28854381 | ||
| Piwi induces piRNA-guided transcriptional silencing and establishment of a repressive chromatin state | Q29544165 | ||
| Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome | Q29547359 | ||
| RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals | Q29547713 | ||
| A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression | Q29614326 | ||
| Long noncoding RNAs with enhancer-like function in human cells | Q29614328 | ||
| Widespread transcription at neuronal activity-regulated enhancers | Q29614330 | ||
| An Argonaute transports siRNAs from the cytoplasm to the nucleus. | Q39752627 | ||
| Argonaute2 cleaves the anti-guide strand of siRNA during RISC activation | Q40354595 | ||
| Slicer function of Drosophila Argonautes and its involvement in RISC formation | Q40648674 | ||
| Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription. | Q41473315 | ||
| Production of aberrant promoter transcripts contributes to methylation and silencing of unlinked homologous promoters in trans | Q41838012 | ||
| A major epigenetic programming mechanism guided by piRNAs | Q42085423 | ||
| RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II. | Q42228801 | ||
| A novel RNAi protein, Dsh1, assembles RNAi machinery on chromatin to amplify heterochromatic siRNA. | Q42321072 | ||
| HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms | Q42540315 | ||
| The Argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation | Q42590501 | ||
| Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena | Q42683656 | ||
| The SRA methyl-cytosine-binding domain links DNA and histone methylation | Q42855393 | ||
| Involvement of the spliceosomal U4 small nuclear RNA in heterochromatic gene silencing at fission yeast centromeres | Q42918010 | ||
| Paramutation’s Properties and Puzzles | Q43459757 | ||
| Establishment of histone h3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 polycomb group complexes | Q44399619 | ||
| Two novel proteins, dos1 and dos2, interact with rik1 to regulate heterochromatic RNA interference and histone modification | Q46696541 | ||
| Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin. | Q46698178 | ||
| Argonaute and Triman generate dicer-independent priRNAs and mature siRNAs to initiate heterochromatin formation. | Q46987001 | ||
| The rhino-deadlock-cutoff complex licenses noncanonical transcription of dual-strand piRNA clusters in Drosophila. | Q47070793 | ||
| DNA methylation is independent of RNA interference in Neurospora | Q47289161 | ||
| Functional anatomy of a dsRNA trigger: differential requirement for the two trigger strands in RNA interference | Q47896469 | ||
| Transcription-induced chromatin association of RNA surveillance factors mediates facultative heterochromatin formation in fission yeast | Q50760889 | ||
| Paramutation in Drosophila linked to emergence of a piRNA-producing locus. | Q52742399 | ||
| A cullin E3 ubiquitin ligase complex associates with Rik1 and the Clr4 histone H3-K9 methyltransferase and is required for RNAi-mediated heterochromatin formation | Q53587538 | ||
| Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing | Q53619809 | ||
| Ubiquitin ligase component Cul4 associates with Clr4 histone methyltransferase to assemble heterochromatin | Q53659537 | ||
| Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs. | Q55039785 | ||
| Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast | Q57973165 | ||
| Jarid2 Is Implicated in the Initial Xist-Induced Targeting of PRC2 to the Inactive X Chromosome | Q60483619 | ||
| RNA: guiding gene silencing | Q74349577 | ||
| SHREC, an effector complex for heterochromatic transcriptional silencing | Q79749446 | ||
| RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing | Q80355985 | ||
| Coupling of double-stranded RNA synthesis and siRNA generation in fission yeast RNAi | Q80688207 | ||
| RNA Elimination Machinery Targeting Meiotic mRNAs Promotes Facultative Heterochromatin Formation | Q82821093 | ||
| Cytoplasmic Assembly and Selective Nuclear Import of Arabidopsis ARGONAUTE4/siRNA Complexes | Q84170965 | ||
| Selective elimination of messenger RNA prevents an incidence of untimely meiosis | Q34545114 | ||
| Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi | Q34582311 | ||
| Red1 promotes the elimination of meiosis-specific mRNAs in vegetatively growing fission yeast | Q34699709 | ||
| Regulation of transcription by long noncoding RNAs | Q34846003 | ||
| Splicing factors facilitate RNAi-directed silencing in fission yeast | Q34864584 | ||
| Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes | Q34881670 | ||
| Convergent transcription induces dynamic DNA methylation at disiRNA loci | Q34988062 | ||
| Implication of sperm RNAs in transgenerational inheritance of the effects of early trauma in mice | Q35097508 | ||
| Transcriptional control of a whole chromosome: emerging models for dosage compensation | Q35125239 | ||
| Determinants of heterochromatic siRNA biogenesis and function | Q35171295 | ||
| The proper splicing of RNAi factors is critical for pericentric heterochromatin assembly in fission yeast | Q35175938 | ||
| Nuclear RNAi maintains heritable gene silencing in Caenorhabditis elegans. | Q35621398 | ||
| Mechanisms for the inheritance of chromatin states | Q35630158 | ||
| Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line | Q35641389 | ||
| Heterochromatin protein 1 homologue Swi6 acts in concert with Ers1 to regulate RNAi-directed heterochromatin assembly | Q35924764 | ||
| Hexanucleotide motifs mediate recruitment of the RNA elimination machinery to silent meiotic genes. | Q35959527 | ||
| Drosophila PIWI associates with chromatin and interacts directly with HP1a | Q35985875 | ||
| Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components. | Q36023554 | ||
| Ers1 links HP1 to RNAi | Q36094273 | ||
| C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts | Q36136040 | ||
| Trichostatin A causes selective loss of DNA methylation in Neurospora | Q36260468 | ||
| piRNAs can trigger a multigenerational epigenetic memory in the germline of C. elegans | Q36298021 | ||
| Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression | Q36417645 | ||
| A nuclear Argonaute promotes multigenerational epigenetic inheritance and germline immortality | Q36433534 | ||
| In vitro transcription activities of Pol IV, Pol V, and RDR2 reveal coupling of Pol IV and RDR2 for dsRNA synthesis in plant RNA silencing | Q36495515 | ||
| Multiple roles for Piwi in silencing Drosophila transposons. | Q36660195 | ||
| piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline | Q36684944 | ||
| Noncoding RNAs and intranuclear positioning in monoallelic gene expression | Q36744488 | ||
| DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV | Q36855291 | ||
| Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa | Q36899000 | ||
| Noncoding RNA and Polycomb recruitment. | Q36915025 | ||
| PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans | Q36943578 | ||
| NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation | Q37111127 | ||
| The piRNA pathway: a fly's perspective on the guardian of the genome. | Q37183402 | ||
| Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription. | Q37340291 | ||
| PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells. | Q37340506 | ||
| Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint | Q37359550 | ||
| The SET domain proteins SUVH2 and SUVH9 are required for Pol V occupancy at RNA-directed DNA methylation loci | Q37504640 | ||
| Long noncoding RNAs: fresh perspectives into the RNA world | Q37524850 | ||
| lncRNA recruits RNAi and the exosome to dynamically regulate pho1 expression in response to phosphate levels in fission yeast. | Q37582980 | ||
| Function, targets, and evolution of Caenorhabditis elegans piRNAs | Q37633703 | ||
| Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance. | Q37682692 | ||
| A two-step process for epigenetic inheritance in Arabidopsis | Q37705180 | ||
| Gatekeepers for Piwi-piRNA complexes to enter the nucleus. | Q37901954 | ||
| Role and control of X chromosome dosage in mammalian development | Q38087059 | ||
| X-Inactivation, Imprinting, and Long Noncoding RNAs in Health and Disease | Q38090112 | ||
| RNA-directed DNA methylation: an epigenetic pathway of increasing complexity | Q38209993 | ||
| Coordination of DNA replication and histone modification by the Rik1-Dos2 complex | Q38267644 | ||
| Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation | Q29614333 | ||
| Role of histone H3 lysine 27 methylation in X inactivation | Q29614508 | ||
| The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race | Q29614715 | ||
| Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly | Q29614718 | ||
| Crystal structure of Argonaute and its implications for RISC slicer activity | Q29614980 | ||
| Small RNAs as guardians of the genome | Q29617221 | ||
| On the role of RNA amplification in dsRNA-triggered gene silencing | Q29617698 | ||
| Argonaute2, a link between genetic and biochemical analyses of RNAi | Q29618385 | ||
| Promiscuous RNA binding by Polycomb repressive complex 2. | Q30457030 | ||
| SRA-domain proteins required for DRM2-mediated de novo DNA methylation | Q33388216 | ||
| An epigenetic role for maternally inherited piRNAs in transposon silencing | Q33585189 | ||
| Gene silencing: repeats that count | Q33603168 | ||
| Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex | Q33626243 | ||
| Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin. | Q33631109 | ||
| The DNA/RNA-Dependent RNA Polymerase QDE-1 Generates Aberrant RNA and dsRNA for RNAi in a Process Requiring Replication Protein A and a DNA Helicase | Q33722060 | ||
| An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. | Q33833568 | ||
| Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2. | Q33914791 | ||
| Long noncoding RNAs usher in a new era in the biology of enhancers | Q33938960 | ||
| Structural basis for 5'-end-specific recognition of guide RNA by the A. fulgidus Piwi protein | Q33986097 | ||
| The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene | Q33996848 | ||
| Importance of polyadenylation in the selective elimination of meiotic mRNAs in growing S. pombe cells. | Q34000165 | ||
| Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline | Q34012402 | ||
| Stc1: a critical link between RNAi and chromatin modification required for heterochromatin integrity. | Q34102684 | ||
| Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects | Q34120020 | ||
| The methyltransferase activity of Clr4Suv39h triggers RNAi independently of histone H3K9 methylation. | Q34135321 | ||
| Small RNAs correspond to centromere heterochromatic repeats | Q34145801 | ||
| cis-acting DNA from fission yeast centromeres mediates histone H3 methylation and recruitment of silencing factors and cohesin to an ectopic site | Q34152857 | ||
| Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II | Q34160383 | ||
| Role for piRNAs and noncoding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus. | Q34184707 | ||
| Activating RNAs associate with Mediator to enhance chromatin architecture and transcription | Q34328232 | ||
| piRNAs, transposon silencing, and Drosophila germline development | Q34368569 | ||
| RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond | Q34385616 | ||
| Argonautes promote male fertility and provide a paternal memory of germline gene expression in C. elegans | Q34393505 | ||
| The C. elegans CSR-1 argonaute pathway counteracts epigenetic silencing to promote germline gene expression | Q34393555 | ||
| Protection of germline gene expression by the C. elegans Argonaute CSR-1. | Q34393560 | ||
| Starvation-induced transgenerational inheritance of small RNAs in C. elegans. | Q34428939 | ||
| Dicer-independent primal RNAs trigger RNAi and heterochromatin formation | Q34487325 | ||
| P433 | issue | 2 | |
| P304 | page(s) | 71-84 | |
| P577 | publication date | 2015-01-02 | |
| P13046 | publication type of scholarly work | review article | Q7318358 |
| P1433 | published in | Nature Reviews Genetics | Q1071824 |
| P1476 | title | RNA-mediated epigenetic regulation of gene expression | |
| P478 | volume | 16 |
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