| scholarly article | Q13442814 |
| P2093 | author name string | Anastasia D Stolyarenko | |
| P2860 | cites work | MPP6 is an exosome-associated RNA-binding protein involved in 5.8S rRNA maturation | Q24300437 |
| The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism | Q24322559 | ||
| ATP-dependent human RISC assembly pathways | Q24336545 | ||
| Functions of the exosome in rRNA, snoRNA and snRNA synthesis | Q24529845 | ||
| Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways | Q24564402 | ||
| A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal | Q24595550 | ||
| An endogenous small interfering RNA pathway in Drosophila | Q24623214 | ||
| A yeast exosome cofactor, Mpp6, functions in RNA surveillance and in the degradation of noncoding RNA transcripts | Q24658122 | ||
| Argonaute protein PIWI controls mobilization of retrotransposons in the Drosophila male germline | Q24791717 | ||
| Evidence for rolling circle replication of tandem genes in Drosophila | Q24812435 | ||
| Production of small RNAs by mammalian Dicer | Q26751455 | ||
| Breaking bad: R-loops and genome integrity | Q26858910 | ||
| Renaissance of mammalian endogenous RNAi | Q26859171 | ||
| The impact of transposable elements in genome evolution and genetic instability and their implications in various diseases | Q27012919 | ||
| Heterochromatin formation promotes longevity and represses ribosomal RNA synthesis | Q27334993 | ||
| Rrp5p, Noc1p and Noc2p form a protein module which is part of early large ribosomal subunit precursors in S. cerevisiae. | Q27929795 | ||
| The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases | Q27930922 | ||
| The evolutionarily conserved protein Las1 is required for pre-rRNA processing at both ends of ITS2 | Q27931464 | ||
| Polyadenylation of rRNA in Saccharomyces cerevisiae. | Q27932222 | ||
| R-loop mediated transcription-associated recombination in trf4Δ mutants reveals new links between RNA surveillance and genome integrity | Q27933182 | ||
| The PMC2NT domain of the catalytic exosome subunit Rrp6p provides the interface for binding with its cofactor Rrp47p, a nucleic acid-binding protein | Q27934035 | ||
| Coordinated Ribosomal ITS2 RNA Processing by the Las1 Complex Integrating Endonuclease, Polynucleotide Kinase, and Exonuclease Activities | Q27934389 | ||
| Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs. | Q27935348 | ||
| Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA. | Q27936202 | ||
| Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control | Q27937988 | ||
| Assembly of Saccharomyces cerevisiae 60S ribosomal subunits: role of factors required for 27S pre-rRNA processing | Q27939136 | ||
| Ngl2p is a Ccr4p-like RNA nuclease essential for the final step in 3'-end processing of 5.8S rRNA in Saccharomyces cerevisiae | Q27939499 | ||
| piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline stem cells | Q28142394 | ||
| Human RNase III is a 160-kDa protein involved in preribosomal RNA processing | Q28144074 | ||
| Extrachromosomal circular DNA of tandemly repeated genomic sequences in Drosophila | Q28178271 | ||
| The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis | Q28213010 | ||
| Biogenesis and germline functions of piRNAs | Q28258430 | ||
| Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells | Q28276069 | ||
| A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila | Q28290099 | ||
| Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila | Q28292093 | ||
| Loss of the Mili-interacting Tudor domain-containing protein-1 activates transposons and alters the Mili-associated small RNA profile | Q28511307 | ||
| A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in Drosophila | Q28673148 | ||
| The 5S RNP couples p53 homeostasis to ribosome biogenesis and nucleolar stress | Q28854588 | ||
| Piwi induces piRNA-guided transcriptional silencing and establishment of a repressive chromatin state | Q29544165 | ||
| A distinct small RNA pathway silences selfish genetic elements in the germline | Q29614717 | ||
| Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways | Q29618467 | ||
| Changes in rRNA transcription influence proliferation and cell fate within a stem cell lineage | Q30583079 | ||
| Heterogeneity in polyadenylation cleavage sites in mammalian mRNA sequences: implications for SAGE analysis. | Q30663306 | ||
| Oocyte determination and the origin of polarity in Drosophila: the role of the spindle genes | Q47071078 | ||
| Noncoding RNA Surveillance: The Ends Justify the Means | Q47663764 | ||
| Piwi Is Required during Drosophila Embryogenesis to License Dual-Strand piRNA Clusters for Transposon Repression in Adult Ovaries | Q47777981 | ||
| Homeless is required for RNA localization in Drosophila oogenesis and encodes a new member of the DE-H family of RNA-dependent ATPases | Q48069855 | ||
| Transcriptional and chromatin changes accompanying de novo formation of transgenic piRNA clusters. | Q48191826 | ||
| A new layer of rRNA regulation by small interference RNAs and the nuclear RNAi pathway. | Q48236179 | ||
| Reconstitution of the complete pathway of ITS2 processing at the pre-ribosome. | Q48236921 | ||
| Accumulation of RNA on chromatin disrupts heterochromatic silencing | Q49576014 | ||
| Identifying small RNAs derived from maternal- and somatic-type rRNAs in Zebrafish Development | Q50098210 | ||
| Participation of the piRNA pathway in recruiting a component of RNA polymerase I transcription initiation complex to germline cell nucleoli | Q50110001 | ||
| Maternal piRNAs Are Essential for Germline Development following De Novo Establishment of Endo-siRNAs in Caenorhabditis elegans | Q50715522 | ||
| Alternative pathways in the processing of ribosomal RNA precursor in Drosophila melanogaster | Q52526052 | ||
| siRNAs and piRNAs Collaborate for Transposon Control in the Two-Spotted Spider Mite. | Q52573434 | ||
| RNA surveillance by the nuclear RNA exosome: mechanisms and significance. | Q52599402 | ||
| The interplay of transposon silencing genes in the Drosophila melanogaster germline | Q52728229 | ||
| PIWI protein as a nucleolus visitor in Drosophila melanogaster | Q52800858 | ||
| Surveillance-ready transcription: nuclear RNA decay as a default fate. | Q55341657 | ||
| A Single Mechanism of Biogenesis, Initiated and Directed by PIWI Proteins, Explains piRNA Production in Most Animals | Q56887532 | ||
| Erroneous ribosomal RNAs promote the generation of antisense ribosomal siRNA | Q57050016 | ||
| The somatic piRNA pathway controls germline transposition over generations | Q57472098 | ||
| Diverse RNA interference strategies in early-branching metazoans | Q58078905 | ||
| The antiviral piRNA response in mosquitoes? | Q58104350 | ||
| Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast | Q58778006 | ||
| From “Cellular” RNA to “Smart” RNA: Multiple Roles of RNA in Genome Stability and Beyond | Q58862336 | ||
| Small Non-Coding RNAs Derived From Eukaryotic Ribosomal RNA | Q64230175 | ||
| Exonuclease domain mutants of yeast DIS3 display genome instability | Q64255778 | ||
| Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks | Q64388860 | ||
| Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA. | Q64883979 | ||
| Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protection | Q80195998 | ||
| RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing | Q80355985 | ||
| A new role of the rDNA and nucleolus in the nucleus--rDNA instability maintains genome integrity | Q80754881 | ||
| The polyadenylation factor CPSF-73 is involved in histone-pre-mRNA processing | Q81327465 | ||
| Nop53p interacts with 5.8S rRNA co-transcriptionally, and regulates processing of pre-rRNA by the exosome | Q81650339 | ||
| Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome | Q81886031 | ||
| An Argonaute Protein Directs Nuclear Xrn2 Function | Q85582628 | ||
| Quantitative Northern Blot Analysis of Mammalian rRNA Processing | Q88233212 | ||
| Rat1 and Xrn2: The Diverse Functions of the Nuclear Rat1/Xrn2 Exonuclease | Q89409711 | ||
| The nucleolar transcriptome regulates Piwi shuttling between the nucleolus and the nucleoplasm | Q90419867 | ||
| Keeping ribosomal DNA intact: a repeating challenge | Q90575517 | ||
| Stress-induced nuclear depletion of Entamoeba histolytica 3'-5' exoribonuclease EhRrp6 and its role in growth and erythrophagocytosis | Q91254037 | ||
| Nuclear Ccr4-Not mediates the degradation of telomeric and transposon transcripts at chromatin in the Drosophila germline | Q91277028 | ||
| PIWI pathway against viruses in insects | Q92651046 | ||
| Endogenous RNAi pathway evolutionarily shapes the destiny of the antisense lncRNAs transcriptome | Q92963555 | ||
| A deeply conserved, noncanonical miRNA hosted by ribosomal DNA. | Q35113562 | ||
| Molecular paleontology of transposable elements in the Drosophila melanogaster genome | Q35143591 | ||
| Mechanism of siRNA production from repetitive DNA | Q35173293 | ||
| An overview of pre-ribosomal RNA processing in eukaryotes | Q35180630 | ||
| Signaling to p53: ribosomal proteins find their way. | Q35206381 | ||
| RNA-mediated epigenetic regulation of gene expression | Q35223649 | ||
| Implication of Ccr4-Not complex function in mRNA quality control in Saccharomyces cerevisiae | Q35262494 | ||
| Separation of stem cell maintenance and transposon silencing functions of Piwi protein | Q35558625 | ||
| TRAMP-mediated RNA surveillance prevents spurious entry of RNAs into the Schizosaccharomyces pombe siRNA pathway | Q35618796 | ||
| A localized nucleolar DNA damage response facilitates recruitment of the homology-directed repair machinery independent of cell cycle stage. | Q35750783 | ||
| RNAi is activated during Drosophila oocyte maturation in a manner dependent on aubergine and spindle-E. | Q35779932 | ||
| Small RNA in the nucleus: the RNA-chromatin ping-pong | Q35935955 | ||
| piRNAs and piRNA-Dependent siRNAs Protect Conserved and Essential C. elegans Genes from Misrouting into the RNAi Pathway | Q35998286 | ||
| MIWI2 and MILI Have Differential Effects on piRNA Biogenesis and DNA Methylation | Q36011085 | ||
| piRNA-guided slicing of transposon transcripts enforces their transcriptional silencing via specifying the nuclear piRNA repertoire. | Q36032461 | ||
| RNA helicase Spn-E is required to maintain Aub and AGO3 protein levels for piRNA silencing in the germline of Drosophila | Q36056335 | ||
| Telomeric repeat silencing in germ cells is essential for early development in Drosophila. | Q36160616 | ||
| The Cochaperone Shutdown Defines a Group of Biogenesis Factors Essential for All piRNA Populations in Drosophila | Q36296128 | ||
| Paramutation in Drosophila Requires Both Nuclear and Cytoplasmic Actors of the piRNA Pathway and Induces Cis-spreading of piRNA Production | Q36365213 | ||
| Global role for polyadenylation-assisted nuclear RNA degradation in posttranscriptional gene silencing | Q36421393 | ||
| Gene regulation by non-coding RNAs | Q36487134 | ||
| RNAi triggered by specialized machinery silences developmental genes and retrotransposons | Q36561712 | ||
| Apoptotic signals induce specific degradation of ribosomal RNA in yeast | Q36676485 | ||
| tRNA cleavage is a conserved response to oxidative stress in eukaryotes | Q36909679 | ||
| A Transcriptome-wide RNAi Screen in the Drosophila Ovary Reveals Factors of the Germline piRNA Pathway | Q37047745 | ||
| Cutoff Suppresses RNA Polymerase II Termination to Ensure Expression of piRNA Precursors | Q37165546 | ||
| Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs | Q37352034 | ||
| RNA Quality Control as a Key to Suppressing RNA Silencing of Endogenous Genes in Plants | Q37441871 | ||
| The endogenous siRNA pathway is involved in heterochromatin formation in Drosophila. | Q37482054 | ||
| Retrotransposable elements R1 and R2 interrupt the rRNA genes of most insects | Q37482459 | ||
| Genetic and mechanistic diversity of piRNA 3'-end formation | Q37511977 | ||
| Noisy silence: non-coding RNA and heterochromatin formation at repetitive elements | Q37591541 | ||
| 5S ribosomal RNA is an essential component of a nascent ribosomal precursor complex that regulates the Hdm2-p53 checkpoint | Q37592131 | ||
| The repetitive DNA content of eukaryotic genomes. | Q38023670 | ||
| DNA damage sensing by the ATM and ATR kinases. | Q38134064 | ||
| Late steps in the maturation of Drosophila 26 S ribosomal RNA: generation of 5-8 S and 2 S RNAs by cleavages occurring in the cytoplasm | Q38359802 | ||
| Insertion of an Alu element in a lncRNA leads to primate-specific modulation of alternative splicing | Q38735185 | ||
| RNA interference in the Colorado potato beetle, Leptinotarsa decemlineata: Identification of key contributors. | Q38740966 | ||
| Breaks in the 45S rDNA Lead to Recombination-Mediated Loss of Repeats | Q38786761 | ||
| Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs | Q39094256 | ||
| Functional analysis of the RNAi response in ovary-derived silkmoth Bm5 cells | Q39152696 | ||
| Sequence and secondary structure of Drosophila melanogaster 5.8S and 2S rRNAs and of the processing site between them | Q39706069 | ||
| Genome-wide analysis reveals distinct substrate specificities of Rrp6, Dis3, and core exosome subunits | Q39773502 | ||
| A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila. | Q39790098 | ||
| qiRNA is a new type of small interfering RNA induced by DNA damage. | Q40190642 | ||
| Repeated genes in eukaryotes | Q40289317 | ||
| The Lupus Autoantigen La Prevents Mis-channeling of tRNA Fragments into the Human MicroRNA Pathway | Q40681550 | ||
| Distribution of split 5.8S ribosomal RNA in Diptera | Q41088755 | ||
| Inducible expression of the 2-5A synthetase/RNase L system results in inhibition of vaccinia virus replication | Q41135027 | ||
| Structure and processing of precursor 5 S RNA in Drosophila melanogaster | Q41379324 | ||
| The effects of stem I and loop A on the processing of 5 S rRNA from Drosophila melanogaster | Q41593819 | ||
| Why does insect RNA look degraded? | Q41670062 | ||
| A Tetrahymena Piwi Bound to Mature tRNA 3′ Fragments Activates the Exonuclease Xrn2 for RNA Processing in the Nucleus | Q41807335 | ||
| Rapid cytoplasmic turnover of yeast ribosomes in response to rapamycin inhibition of TOR. | Q41893438 | ||
| Evolution of ribosomal RNA gene copy number on the sex chromosomes of Drosophila melanogaster | Q41899111 | ||
| Retrotransposons and pseudogenes regulate mRNAs and lncRNAs via the piRNA pathway in the germline | Q42056098 | ||
| Human nuclear Dicer restricts the deleterious accumulation of endogenous double-stranded RNA. | Q42152387 | ||
| Transcription termination and RNA degradation contribute to silencing of RNA polymerase II transcription within heterochromatin | Q42524806 | ||
| Proliferation of Double-Strand Break-Resistant Polyploid Cells Requires Drosophila FANCD2. | Q42735314 | ||
| Noncoding Transcripts in Sense and Antisense Orientation Regulate the Epigenetic State of Ribosomal RNA Genes | Q42742473 | ||
| A photographic study of development in the living embryo of Drosophila melanogaster | Q43675550 | ||
| piRNA Biogenesis in Drosophila melanogaster | Q46301988 | ||
| Argonaute and Triman generate dicer-independent priRNAs and mature siRNAs to initiate heterochromatin formation. | Q46987001 | ||
| The Drosophila SDE3 homolog armitage is required for oskar mRNA silencing and embryonic axis specification | Q47071009 | ||
| Quelling targets the rDNA locus and functions in rDNA copy number control | Q33412565 | ||
| The CCR4-NOT complex physically and functionally interacts with TRAMP and the nuclear exosome | Q33496770 | ||
| A broadly conserved pathway generates 3'UTR-directed primary piRNAs | Q33614944 | ||
| H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability | Q33641829 | ||
| Transposable elements in Drosophila | Q33725396 | ||
| Small RNA Pathways That Protect the Somatic Genome | Q33754789 | ||
| Tailing and degradation of Argonaute-bound small RNAs protect the genome from uncontrolled RNAi. | Q33762828 | ||
| Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary | Q33901565 | ||
| Female sterile mutations on the second chromosome of Drosophila melanogaster. II. Mutations blocking oogenesis or altering egg morphology | Q33958832 | ||
| DNA replication initiation patterns and spatial dynamics of the human ribosomal RNA gene loci | Q33978073 | ||
| Drosophila rasiRNA pathway mutations disrupt embryonic axis specification through activation of an ATR/Chk2 DNA damage response | Q34001721 | ||
| Eukaryotic 5S rRNA biogenesis | Q34028735 | ||
| Low levels of p53 protein and chromatin silencing of p53 target genes repress apoptosis in Drosophila endocycling cells | Q34165710 | ||
| A genome-scale shRNA resource for transgenic RNAi in Drosophila | Q34175440 | ||
| Nucleolar stress with and without p53. | Q34183329 | ||
| FlyMove--a new way to look at development of Drosophila | Q34205111 | ||
| Functional characterization of the Drosophila MRP (mitochondrial RNA processing) RNA gene | Q34210384 | ||
| An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila | Q34211342 | ||
| Heterotypic piRNA Ping-Pong Requires Qin, a Protein with Both E3 Ligase and Tudor Domains | Q34234176 | ||
| Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila | Q34288988 | ||
| Profiling and identification of small rDNA-derived RNAs and their potential biological functions | Q34328342 | ||
| Incomplete replication generates somatic DNA alterations within Drosophila polytene salivary gland cells | Q34342909 | ||
| Decay of mRNAs targeted by RISC requires XRN1, the Ski complex, and the exosome | Q34366308 | ||
| Virus infection triggers widespread silencing of host genes by a distinct class of endogenous siRNAs in Arabidopsis. | Q34407483 | ||
| Noncoding RNA. piRNA-guided slicing specifies transcripts for Zucchini-dependent, phased piRNA biogenesis | Q34476509 | ||
| Noncoding RNA. piRNA-guided transposon cleavage initiates Zucchini-dependent, phased piRNA production | Q34476516 | ||
| The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells | Q34537010 | ||
| Dicer promotes transcription termination at sites of replication stress to maintain genome stability | Q34567609 | ||
| zucchini and squash encode two putative nucleases required for rasiRNA production in the Drosophila germline | Q34633591 | ||
| 5'-end surveillance by Xrn2 acts as a shared mechanism for mammalian pre-rRNA maturation and decay | Q34699786 | ||
| The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components | Q34958821 | ||
| piRNAs mediate posttranscriptional retroelement silencing and localization to pi-bodies in the Drosophila germline | Q34995447 | ||
| Depletion of key protein components of the RISC pathway impairs pre-ribosomal RNA processing | Q35040997 | ||
| Euchromatic transposon insertions trigger production of novel Pi- and endo-siRNAs at the target sites in the drosophila germline | Q35091284 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 3 | |
| P577 | publication date | 2020-02-07 | |
| P1433 | published in | International Journal of Molecular Sciences | Q3153277 |
| P1476 | title | Nuclear Argonaute Piwi Gene Mutation Affects rRNA by Inducing rRNA Fragment Accumulation, Antisense Expression, and Defective Processing in Drosophila Ovaries | |
| P478 | volume | 21 |
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