Next-generation sequencing and de novo assembly, genome organization, and comparative genomic analyses of the genomes of two Helicobacter pylori isolates from duodenal ulcer patients in India

scientific article

Next-generation sequencing and de novo assembly, genome organization, and comparative genomic analyses of the genomes of two Helicobacter pylori isolates from duodenal ulcer patients in India is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/JB.01371-12
P932PMC publication ID3486096
P698PubMed publication ID23045484

P2093author name stringJawed Alam
Niyaz Ahmed
Narender Kumar
Asish K Mukhopadhyay
Ramani Baddam
Rajashree Patra
Ronita De
Sabiha Shaik
Suma Tiruvayipati
P2860cites workThe RAST Server: rapid annotations using subsystems technologyQ21263157
A flood of microbial genomes-do we need more?Q21562412
Velvet: algorithms for de novo short read assembly using de Bruijn graphsQ24657623
An African origin for the intimate association between humans and Helicobacter pyloriQ24671467
BLAT—The BLAST-Like Alignment ToolQ24682492
EasyGene--a prokaryotic gene finder that ranks ORFs by statistical significanceQ24797596
Versatile and open software for comparing large genomesQ24807126
Improved microbial gene identification with GLIMMERQ27860463
Using galaxy to perform large-scale interactive data analysesQ28277397
Scaffolding pre-assembled contigs using SSPACEQ29616857
Traces of human migrations in Helicobacter pylori populationsQ29618510
Genomes of Helicobacter pylori from native Peruvians suggest admixture of ancestral and modern lineages and reveal a western type cag-pathogenicity islandQ33252023
Ancestral European roots of Helicobacter pylori in IndiaQ33288467
Helicobacter pylori from Peruvian amerindians: traces of human migrations in strains from remote Amazon, and genome sequence of an Amerind strainQ33760715
Coadaptation of Helicobacter pylori and humans: ancient history, modern implicationsQ37328454
Distinguishing human ethnic groups by means of sequences from Helicobacter pylori: lessons from LadakhQ37414888
Helicobacter pylori typing as a tool for tracking human migrationQ37585441
Coevolution and adaptation of Helicobacter pylori and the case for 'functional molecular infection epidemiology'.Q37943938
Genome of Helicobacter pylori strain 908.Q41430293
Genomes of two chronological isolates (Helicobacter pylori 2017 and 2018) of the West African Helicobacter pylori strain 908 obtained from a single patientQ41927084
P433issue21
P407language of work or nameEnglishQ1860
P921main subjectIndiaQ668
Helicobacter pyloriQ180556
P304page(s)5963-5964
P577publication date2012-11-01
P1433published inJournal of BacteriologyQ478419
P1476titleNext-generation sequencing and de novo assembly, genome organization, and comparative genomic analyses of the genomes of two Helicobacter pylori isolates from duodenal ulcer patients in India
P478volume194

Reverse relations

cites work (P2860)
Q41632351Comparative genomic analysis of Helicobacter pylori from Malaysia identifies three distinct lineages suggestive of differential evolution
Q35208540Comparative genomics of a Helicobacter pylori isolate from a Chinese Yunnan Naxi ethnic aborigine suggests high genetic divergence and phage insertion
Q37653448Genomes of Two Clinical Isolates of Mycobacterium tuberculosis from Odisha, India
Q37609300Genomic characterization of a Helicobacter pylori isolate from a patient with gastric cancer in China
Q33357979Helicobacter pylori and gastric cancer: Indian enigma
Q38134863Helicobacter pylori in 2013: multiplying genomes, emerging insights
Q39553535India's Computational Biology Growth and Challenges
Q41279814Phylogenomics of Colombian Helicobacter pylori isolates
Q90610733Role of the Photorhabdus Dam methyltransferase during interactions with its invertebrate hosts

Search more.