Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1.

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Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1. is …
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scholarly articleQ13442814

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P356DOI10.3389/FMICB.2012.00367
P932PMC publication ID3486646
P698PubMed publication ID23125841
P5875ResearchGate publication ID232814380

P2093author name stringAndrew J Mouland
Miroslav P Milev
David C Schriemer
Morgan F Khan
Mukunthan Ravichandran
P2860cites workLoss of Niemann Pick type C proteins 1 and 2 greatly enhances HIV infectivity and is associated with accumulation of HIV Gag and cholesterol in late endosomes/lysosomesQ21245090
Mammalian staufen is a double-stranded-RNA- and tubulin-binding protein which localizes to the rough endoplasmic reticulumQ22008762
Destiny of Unspliced Retroviral RNA: Ribosome and/or Virion?Q22242227
Tsg101 and the vacuolar protein sorting pathway are essential for HIV-1 buddingQ24291784
Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decayQ24293099
Basic residues in the nucleocapsid domain of Gag are required for interaction of HIV-1 gag with ABCE1 (HP68), a cellular protein important for HIV-1 capsid assemblyQ24294072
Molecular composition of IMP1 ribonucleoprotein granulesQ24296417
Global landscape of HIV-human protein complexesQ24300336
Characterization of Staufen 1 ribonucleoprotein complexesQ24300881
Molecular cloning of matrin 3. A 125-kilodalton protein of the nuclear matrix contains an extensive acidic domainQ24304371
Trafficking of HIV-1 RNA is mediated by heterogeneous nuclear ribonucleoprotein A2 expression and impacts on viral assemblyQ24304953
Identification of host proteins required for HIV infection through a functional genomic screenQ24306298
An eIF4AIII-containing complex required for mRNA localization and nonsense-mediated mRNA decayQ24310142
The host protein Staufen1 interacts with the Pr55Gag zinc fingers and regulates HIV-1 assembly via its N-terminusQ24315925
Cloning and characterization of a novel cellular protein, TDP-43, that binds to human immunodeficiency virus type 1 TAR DNA sequence motifsQ24317451
Editing of HIV-1 RNA by the double-stranded RNA deaminase ADAR1 stimulates viral infectionQ24320104
The composition of Staufen-containing RNA granules from human cells indicates their role in the regulated transport and translation of messenger RNAsQ24338478
Plunder and stowaways: incorporation of cellular proteins by enveloped virusesQ24524170
The double-stranded RNA-binding protein Staufen is incorporated in human immunodeficiency virus type 1: evidence for a role in genomic RNA encapsidationQ24525207
NF-kappaB-repressing factor inhibits elongation of human immunodeficiency virus type 1 transcription by DRB sensitivity-inducing factorQ24529956
Complexes between the nonsense-mediated mRNA decay pathway factor human upf1 (up-frameshift protein 1) and essential nonsense-mediated mRNA decay factors in HeLa cellsQ24530107
Interaction of influenza virus NS1 protein and the human homologue of Staufen in vivo and in vitroQ24548910
Cellular proteins detected in HIV-1.Q37081238
Multiplexed RNA trafficking in oligodendrocytes and neuronsQ37149529
Intracellular transport of human immunodeficiency virus type 1 genomic RNA and viral production are dependent on dynein motor function and late endosome positioningQ37194255
Cellular microRNA and P bodies modulate host-HIV-1 interactionsQ37391014
Dynamic oscillation of translation and stress granule formation mark the cellular response to virus infectionQ37416617
Human immunodeficiency virus type 1 (HIV-1) induces the cytoplasmic retention of heterogeneous nuclear ribonucleoprotein A1 by disrupting nuclear import: implications for HIV-1 gene expressionQ37431534
The COPI system: molecular mechanisms and functionQ37561802
Implications of Nef: host cell interactions in viral persistence and progression to AIDS.Q37655448
Inhibiting the Arp2/3 complex limits infection of both intracellular mature vaccinia virus and primate lentivirusesQ37657108
The tandem affinity purification method: an efficient system for protein complex purification and protein interaction identificationQ37732901
Staufen: from embryo polarity to cellular stress and neurodegenerationQ37971759
A late role for the association of hnRNP A2 with the HIV-1 hnRNP A2 response elements in genomic RNA, Gag, and Vpr localizationQ38338097
Human immunodeficiency virus type 1 Gag polyprotein modulates its own translationQ39291698
Role of RNA in facilitating Gag/Gag-Pol interactionQ39683238
Human Staufen1 protein interacts with influenza virus ribonucleoproteins and is required for efficient virus multiplicationQ39700069
Multimerization of Staufen1 in live cellsQ39751807
Novel Staufen1 ribonucleoproteins prevent formation of stress granules but favour encapsidation of HIV-1 genomic RNA.Q39755331
Identification of a heterogeneous nuclear ribonucleoprotein-recognition region in the HIV Rev proteinQ39790727
Autogenous regulation of RNA translation and packaging by Rous sarcoma virus Pr76gag.Q39876360
HIV-1 exploits importin 7 to maximize nuclear import of its DNA genomeQ39887537
The host protein Staufen1 participates in human immunodeficiency virus type 1 assembly in live cells by influencing pr55Gag multimerizationQ40146707
The anti-HIV-1 editing enzyme APOBEC3G binds HIV-1 RNA and messenger RNAs that shuttle between polysomes and stress granulesQ40247992
Association of RNA helicase a with human immunodeficiency virus type 1 particlesQ40306824
Identification of cellular factors associated with the 3'-nontranslated region of the hepatitis C virus genomeQ40311724
Rab5 and Rab7, but not ARF6, govern the early events of HIV-1 infection in polarized human placental cellsQ40354283
Identification of a host protein essential for assembly of immature HIV-1 capsidsQ40758531
Lipid rafts and HIV pathogenesis: host membrane cholesterol is required for infection by HIV type 1.Q40788372
RNA on the move: the mRNA localization pathwayQ40863494
hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicingQ41679293
Differential effects of hnRNP D/AUF1 isoforms on HIV-1 gene expression.Q41834943
Staufen1 is imported into the nucleolus via a bipartite nuclear localization signal and several modulatory determinantsQ41972796
Proteomic studies reveal coordinated changes in T-cell expression patterns upon infection with human immunodeficiency virus type 1.Q42110720
Detection of viral RNA by fluorescence in situ hybridization (FISH).Q42116188
Host ABCE1 is at plasma membrane HIV assembly sites and its dissociation from Gag is linked to subsequent events of virus productionQ42132421
Interactions in vivo between the Vif protein of HIV-1 and the precursor (Pr55(GAG)) of the virion nucleocapsid proteinsQ43261930
HIV-1 gag proteins: diverse functions in the virus life cycleQ43783202
Characterization of ribosomal frameshifting in HIV-1 gag-pol expressionQ46573916
Xenopus Staufen is a component of a ribonucleoprotein complex containing Vg1 RNA and kinesinQ47428408
LRP130, a single-stranded DNA/RNA-binding protein, localizes at the outer nuclear and endoplasmic reticulum membrane, and interacts with mRNA in vivoQ47773957
A membrane-proximal tyrosine-based signal mediates internalization of the HIV-1 envelope glycoprotein via interaction with the AP-2 clathrin adaptorQ47981910
The mammalian staufen protein localizes to the somatodendritic domain of cultured hippocampal neurons: implications for its involvement in mRNA transport.Q47998458
Genomewide Association Study of an AIDS‐Nonprogression Cohort Emphasizes the Role Played byHLAGenes (ANRS Genomewide Association Study 02)Q57249723
IMP1 interacts with poly(A)-binding protein (PABP) and the autoregulatory translational control element of PABP-mRNA through the KH III-IV domainQ79526004
Genome-scale RNAi screen for host factors required for HIV replicationQ79769455
Kinesin-3 and dynein mediate microtubule-dependent co-transport of mRNPs and endosomesQ83493523
Visualization of RNA-protein interactions in living cells: FMRP and IMP1 interact on mRNAsQ24563367
Phosphatidylinositol (4,5) bisphosphate regulates HIV-1 Gag targeting to the plasma membraneQ24563708
Identification of Staufen in the human immunodeficiency virus type 1 Gag ribonucleoprotein complex and a role in generating infectious viral particlesQ24599767
Tsg101, a homologue of ubiquitin-conjugating (E2) enzymes, binds the L domain in HIV type 1 Pr55(Gag)Q24633537
Deficiency of niemann-pick type C-1 protein impairs release of human immunodeficiency virus type 1 and results in Gag accumulation in late endosomal/lysosomal compartmentsQ24644759
Identification of a sequence required for efficient packaging of human immunodeficiency virus type 1 RNA into virionsQ24645417
A genome-wide approach identifies distinct but overlapping subsets of cellular mRNAs associated with Staufen1- and Staufen2-containing ribonucleoprotein complexesQ24647266
Specific incorporation of heat shock protein 70 family members into primate lentiviral virionsQ24674076
Nuclear import of HIV-1 intracellular reverse transcription complexes is mediated by importin 7Q24681578
Role of RNA helicases in HIV-1 replicationQ27477537
The specificity of the CRM1-Rev nuclear export signal interaction is mediated by RanGTP.Q27867724
The tandem affinity purification (TAP) method: a general procedure of protein complex purificationQ28131621
Molecular insights into mRNA transport and local translation in the mammalian nervous systemQ28137993
Involvement of adenylate cyclase and p70(S6)-kinase activation in IL-10 up-regulation in human monocytes by gp41 envelope protein of human immunodeficiency virus type 1Q28139446
Tumor susceptibility gene 101 protein represses androgen receptor transactivation and interacts with p300Q28141609
Interactions of HIV-1 nef with the mu subunits of adaptor protein complexes 1, 2, and 3: role of the dileucine-based sorting motifQ28144530
Barentsz, a new component of the Staufen-containing ribonucleoprotein particles in mammalian cells, interacts with Staufen in an RNA-dependent mannerQ28185024
The fate of dsRNA in the nucleus: a p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAsQ28214585
AP-3 directs the intracellular trafficking of HIV-1 Gag and plays a key role in particle assemblyQ28239650
Interaction of tyrosine-based sorting signals with clathrin-associated proteinsQ28290076
A functional RNAi screen links O-GlcNAc modification of ribosomal proteins to stress granule and processing body assemblyQ28294112
VICKZ proteins: a multi-talented family of regulatory RNA-binding proteinsQ28298447
Staufen recruitment into stress granules does not affect early mRNA transport in oligodendrocytesQ28572768
Recruitment of the Crm1 nuclear export factor is sufficient to induce cytoplasmic expression of incompletely spliced human immunodeficiency virus mRNAsQ28646696
Production of acquired immunodeficiency syndrome-associated retrovirus in human and nonhuman cells transfected with an infectious molecular cloneQ29547734
Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infectionQ29547852
Live cell visualization of the interactions between HIV-1 Gag and the cellular RNA-binding protein Staufen1Q30435825
RNA trafficking signals in human immunodeficiency virus type 1.Q30453555
Endosomal trafficking of HIV-1 gag and genomic RNAs regulates viral egress.Q30490064
The role of membranes and membrane trafficking in RNA localizationQ35985156
Retention and repression: fates of hyperedited RNAs in the nucleusQ36131523
The interaction of HIV-1 with the host factors.Q36171664
Human immunodeficiency virus type 1 Vif protein binds to the Pr55Gag precursorQ36548864
Requirement of the Pr55gag precursor for incorporation of the Vpr product into human immunodeficiency virus type 1 viral particlesQ36630330
Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity.Q36654112
Host factors exploited by retrovirusesQ36746350
Mechanisms of CD4 downregulation by the Nef and Vpu proteins of primate immunodeficiency virusesQ36754608
Characterization and expression of novel singly spliced RNA species of human immunodeficiency virus type 1Q36783395
Cloning and functional analysis of multiply spliced mRNA species of human immunodeficiency virus type 1Q36806618
Intracellular destinies: degradation, targeting, assembly, and endocytosis of HIV Gag.Q36993231
RNA quality control in eukaryotesQ37005637
Live-cell coimaging of the genomic RNAs and Gag proteins of two lentivirusesQ30495474
Proteomic and biochemical analysis of purified human immunodeficiency virus type 1 produced from infected monocyte-derived macrophagesQ33255758
Mammalian tumor susceptibility gene 101 (TSG101) and the yeast homologue, Vps23p, both function in late endosomal trafficking.Q33285661
HIV replication enhances production of free fatty acids, low density lipoproteins and many key proteins involved in lipid metabolism: a proteomics studyQ33361587
Flexible use of nuclear import pathways by HIV-1.Q33739260
Viral RNA is required for the association of APOBEC3G with human immunodeficiency virus type 1 nucleoprotein complexesQ33755180
Vpr stimulates viral expression and induces cell killing in human immunodeficiency virus type 1-infected dividing Jurkat T cellsQ33783972
Translation elongation factor 1-alpha interacts specifically with the human immunodeficiency virus type 1 Gag polyproteinQ33814996
Dileucine-based sorting signals bind to the beta chain of AP-1 at a site distinct and regulated differently from the tyrosine-based motif-binding siteQ33888654
Proteins binding to duplexed RNA: one motif, multiple functionsQ33899394
Nef induces multiple genes involved in cholesterol synthesis and uptake in human immunodeficiency virus type 1-infected T cellsQ33908866
Staufen: a common component of mRNA transport in oocytes and neurons?Q33913397
Molecular biology of human immunodeficiency virus type 1.Q34068222
Hypophosphorylation of poly(A) polymerase and increased polyadenylation activity are associated with human immunodeficiency virus type 1 Vpr expressionQ34117070
Human immunodeficiency virus type 1 preferentially encapsidates genomic RNAs that encode Pr55(Gag): functional linkage between translation and RNA packagingQ34117616
Discovery of the first small molecule inhibitor of human DDX3 specifically designed to target the RNA binding site: towards the next generation HIV-1 inhibitors.Q34149154
HIV-1 Gag-RNA interaction occurs at a perinuclear/centrosomal site; analysis by confocal microscopy and FRET.Q34443134
Interaction of HIV-1 Gag with the clathrin-associated adaptor AP-2.Q34448034
Double-stranded RNA adenosine deaminases enhance expression of human immunodeficiency virus type 1 proteinsQ34657013
The retrovirus RNA trafficking granule: from birth to maturityQ34667412
Unexpected roles for UPF1 in HIV-1 RNA metabolism and translationQ34764810
Potential roles of cellular proteins in HIV-1.Q34985857
HIV-1 replicationQ35016623
High-molecular-mass APOBEC3G complexes restrict Alu retrotranspositionQ35070356
The dsRNA binding protein family: critical roles, diverse cellular functionsQ35139546
Nef increases the synthesis of and transports cholesterol to lipid rafts and HIV-1 progeny virionsQ35168397
Dynamin 2 is required for the enhancement of HIV-1 infectivity by Nef.Q35800393
Staufen1 regulates diverse classes of mammalian transcriptsQ35837048
RNA secondary structure and binding sites for gag gene products in the 5' packaging signal of human immunodeficiency virus type 1.Q35837228
The p6gag domain of human immunodeficiency virus type 1 is sufficient for the incorporation of Vpr into heterologous viral particlesQ35838540
PSF acts through the human immunodeficiency virus type 1 mRNA instability elements to regulate virus expressionQ35920650
Cellular functions of NSF: not just SNAPs and SNAREsQ35940245
The double-stranded-RNA-binding motif: interference and much moreQ35968493
P4510describes a project that usesmass spectrometryQ180809
P407language of work or nameEnglishQ1860
P921main subjectribonucleoprotein complexQ417662
P304page(s)367
P577publication date2012-10-25
P1433published inFrontiers in MicrobiologyQ27723481
P1476titleCharacterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1.
P478volume3

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cites work (P2860)
Q39795056Analysis of HIV-1 Gag protein interactions via biotin ligase tagging
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Q37534394Depletion of hnRNP A2/B1 overrides the nuclear retention of the HIV-1 genomic RNA.
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Q47414816HIV-1 NC-induced stress granule assembly and translation arrest are inhibited by the dsRNA binding protein Staufen1.
Q30488459HIV-1 Recruits UPF1 but Excludes UPF2 to Promote Nucleocytoplasmic Export of the Genomic RNA.
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Q99402510The importance of virion-incorporated cellular RNA-Binding Proteins in viral particle assembly and infectivity
Q37142582Viral subversion of the nuclear pore complex

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