| scholarly article | Q13442814 |
| P50 | author | Björn Brembs | Q879571 |
| Casey M Bergman | Q42360644 | ||
| Nelson C Lau | Q56461575 | ||
| Yuliya A Sytnikova | Q57317958 | ||
| P2093 | author name string | Abhay Kanodia | |
| Gung-wei Chirn | |||
| Reazur Rahman | |||
| P2860 | cites work | Sure facts, speculations, and open questions about the evolution of transposable element copy number | Q41756995 |
| Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes | Q44784678 | ||
| The transposable element Bari-Jheh mediates oxidative stress response in Drosophila | Q45278779 | ||
| Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences | Q47207133 | ||
| Ultrafast and memory-efficient alignment of short DNA sequences to the human genome | Q21183894 | ||
| Recurrent insertion and duplication generate networks of transposable element sequences in the Drosophila melanogaster genome | Q21184150 | ||
| The UCSC Genome Browser database: update 2011 | Q24625811 | ||
| BLAT—The BLAST-Like Alignment Tool | Q24682492 | ||
| The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective | Q24803634 | ||
| Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome | Q24815141 | ||
| Fast gapped-read alignment with Bowtie 2 | Q27860699 | ||
| P-M hybrid dysgenesis does not mobilize other transposable element families in D. melanogaster. | Q52455715 | ||
| The genomic rate of transposable element movement in Drosophila melanogaster. | Q52540829 | ||
| Rates of movement of transposable elements in Drosophila melanogaster. | Q52548313 | ||
| Fluorescence in situ hybridization analysis of hobo, mdg1 and Dm412 transposable elements reveals genomic instability following the Drosophila melanogaster genome sequencing. | Q52681325 | ||
| Direct determination of the effects of genotype and extreme temperature on the transposition of roo in long-term mutation accumulation lines of Drosophila melanogaster. | Q52682550 | ||
| Genomic distribution of retrotransposons 297, 1731, copia, mdg1 and roo in the Drosophila melanogaster species subgroup. | Q52700351 | ||
| Long-term evolution of the roo transposable element copy number in mutation accumulation lines of Drosophila melanogaster. | Q52720126 | ||
| A universal classification of eukaryotic transposable elements implemented in Repbase. | Q55049714 | ||
| PERSPECTIVE: TRANSPOSABLE ELEMENTS, PARASITIC DNA, AND GENOME EVOLUTION | Q56267651 | ||
| Rates of movement of transposable elements on the second chromosome of Drosophila melanogaster | Q73996425 | ||
| Rates of movement and distribution of transposable elements in Drosophila melanogaster: in situ hybridization vs Southern blotting data | Q77318368 | ||
| The genome sequence of Drosophila melanogaster | Q27860796 | ||
| The Sequence Alignment/Map format and SAMtools | Q27860966 | ||
| Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila | Q28292093 | ||
| A transposable element insertion confers xenobiotic resistance in Drosophila | Q28541894 | ||
| Human Genomics. Sleeping dogs of the genome | Q28650848 | ||
| T-lex: a program for fast and accurate assessment of transposable element presence using next-generation sequencing data | Q28741643 | ||
| Fast and accurate long-read alignment with Burrows-Wheeler transform | Q29547193 | ||
| Trimmomatic: a flexible trimmer for Illumina sequence data | Q29547278 | ||
| A distinct small RNA pathway silences selfish genetic elements in the germline | Q29614717 | ||
| A whole-genome assembly of Drosophila | Q29616863 | ||
| Identification of functional elements and regulatory circuits by Drosophila modENCODE | Q29617551 | ||
| BEDTools: The Swiss-Army Tool for Genome Feature Analysis. | Q30370926 | ||
| The Drosophila melanogaster Genetic Reference Panel | Q30418740 | ||
| Genomic evidence of rapid and stable adaptive oscillations over seasonal time scales in Drosophila | Q30868042 | ||
| T-lex2: genotyping, frequency estimation and re-annotation of transposable elements using single or pooled next-generation sequencing data | Q30878545 | ||
| Pitfalls of mapping high-throughput sequencing data to repetitive sequences: Piwi's genomic targets still not identified. | Q30915238 | ||
| Long-read, whole-genome shotgun sequence data for five model organisms | Q30952245 | ||
| Evolutionary dynamics of the LTR retrotransposons roo and rooA inferred from twelve complete Drosophila genomes | Q33494716 | ||
| Genome-wide patterns of adaptation to temperate environments associated with transposable elements in Drosophila | Q33553464 | ||
| Parallel geographic variation in Drosophila melanogaster | Q33575833 | ||
| An epigenetic role for maternally inherited piRNAs in transposon silencing | Q33585189 | ||
| Population dynamics of PIWI-interacting RNAs (piRNAs) and their targets in Drosophila | Q33618933 | ||
| The Release 5.1 annotation of Drosophila melanogaster heterochromatin | Q33641913 | ||
| Genomic instability of I elements of Drosophila melanogaster in absence of dysgenic crosses | Q33722158 | ||
| Distinct functions for the Drosophila piRNA pathway in genome maintenance and telomere protection | Q33778770 | ||
| TEMP: a computational method for analyzing transposable element polymorphism in populations | Q33791110 | ||
| DINE-1, the highest copy number repeats in Drosophila melanogaster are non-autonomous endonuclease-encoding rolling-circle transposable elements (Helentrons). | Q33792470 | ||
| Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines | Q33839446 | ||
| Modified P elements that mimic the P cytotype in Drosophila melanogaster | Q33956052 | ||
| Evidence for horizontal transmission of the P transposable element between Drosophila species | Q33956180 | ||
| Genetic analysis of the brahma gene of Drosophila melanogaster and polytene chromosome subdivisions 72AB. | Q33963235 | ||
| Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome | Q33998243 | ||
| Molecular evolution under increasing transposable element burden in Drosophila: a speed limit on the evolutionary arms race | Q34019486 | ||
| Stress and transposable elements: co-evolution or useful parasites? | Q34049943 | ||
| Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data | Q34095905 | ||
| Long-term and short-term evolutionary impacts of transposable elements on Drosophila | Q36439815 | ||
| Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing | Q36660160 | ||
| Multiple roles for Piwi in silencing Drosophila transposons. | Q36660195 | ||
| Analysis of piRNA-mediated silencing of active TEs in Drosophila melanogaster suggests limits on the evolution of host genome defense | Q37003089 | ||
| Position-effect variegation, heterochromatin formation, and gene silencing in Drosophila | Q37040262 | ||
| Abundance and distribution of transposable elements in two Drosophila QTL mapping resources. | Q37171775 | ||
| Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes | Q37207183 | ||
| Activation of transposable elements during aging and neuronal decline in Drosophila | Q37292353 | ||
| A 'higher order' of telomere regulation: telomere heterochromatin and telomeric RNAs | Q37293050 | ||
| Chromatin structure and transposable elements in organismal aging | Q37361621 | ||
| Causes and consequences of genetic background effects illuminated by integrative genomic analysis. | Q37696381 | ||
| Transposition rates of movable genetic elements in Drosophila melanogaster | Q37747833 | ||
| Mobile DNA elements in the generation of diversity and complexity in the brain | Q38227447 | ||
| The population genetics of Drosophila transposable elements | Q38321781 | ||
| Assembling large genomes with single-molecule sequencing and locality-sensitive hashing | Q38871284 | ||
| Genome and stresses: reactions against aggressions, behavior of transposable elements | Q40564732 | ||
| Horizontal transfer of hobo transposable elements within the Drosophila melanogaster species complex: evidence from DNA sequencing | Q41086663 | ||
| Reassessment of Piwi binding to the genome and Piwi impact on RNA polymerase II distribution. | Q41168953 | ||
| Accumulation of transposable elements in laboratory lines of Drosophila melanogaster | Q41688056 | ||
| Sub-strains of Drosophila Canton-S differ markedly in their locomotor behavior | Q34140855 | ||
| Sequencing of pooled DNA samples (Pool-Seq) uncovers complex dynamics of transposable element insertions in Drosophila melanogaster | Q34145763 | ||
| Whole genome resequencing reveals natural target site preferences of transposable elements in Drosophila melanogaster | Q34162471 | ||
| A lot about a little dot - lessons learned from Drosophila melanogaster chromosome 4. | Q34179494 | ||
| Perspective: transposable elements, parasitic DNA, and genome evolution | Q34192362 | ||
| Nuclear Organization and Dosage Compensation | Q34241149 | ||
| Experimental evolution of Legionella pneumophila in mouse macrophages leads to strains with altered determinants of environmental survival | Q34302151 | ||
| Incomplete replication generates somatic DNA alterations within Drosophila polytene salivary gland cells | Q34342909 | ||
| Variation in piRNA and transposable element content in strains of Drosophila melanogaster | Q34472576 | ||
| Population Genomics of sub-saharan Drosophila melanogaster: African diversity and non-African admixture | Q34531227 | ||
| The dynamics of transposable elements in structured populations | Q34569974 | ||
| Transposable element dynamics and PIWI regulation impacts lncRNA and gene expression diversity in Drosophila ovarian cell cultures. | Q34590429 | ||
| Aligning short sequencing reads with Bowtie | Q34625771 | ||
| A genome-wide, fine-scale map of natural pigmentation variation in Drosophila melanogaster. | Q34765394 | ||
| Population genomics of transposable elements in Drosophila melanogaster. | Q34823735 | ||
| Gene expression variation in Drosophila melanogaster due to rare transposable element insertion alleles of large effect. | Q34864384 | ||
| DNA copy number evolution in Drosophila cell lines | Q34896129 | ||
| Identification of a new, abundant superfamily of mammalian LTR-transposons | Q34980402 | ||
| Genomic organization of the Drosophila telomere retrotransposable elements | Q35056707 | ||
| Circumventing heterozygosity: sequencing the amplified genome of a single haploid Drosophila melanogaster embryo | Q35065475 | ||
| Euchromatic transposon insertions trigger production of novel Pi- and endo-siRNAs at the target sites in the drosophila germline | Q35091284 | ||
| Strain-specific and pooled genome sequences for populations of Drosophila melanogaster from three continents | Q35092813 | ||
| The Release 6 reference sequence of the Drosophila melanogaster genome. | Q35157239 | ||
| FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations | Q35253618 | ||
| Global diversity lines - a five-continent reference panel of sequenced Drosophila melanogaster strains | Q35330285 | ||
| Dynamic interactions between transposable elements and their hosts | Q35333511 | ||
| The Drosophila genome nexus: a population genomic resource of 623 Drosophila melanogaster genomes, including 197 from a single ancestral range population | Q35342526 | ||
| Adaptation to P element transposon invasion in Drosophila melanogaster | Q35636202 | ||
| The Role of piRNA-Mediated Epigenetic Silencing in the Population Dynamics of Transposable Elements in Drosophila melanogaster | Q35652808 | ||
| Tempo and Mode of Transposable Element Activity in Drosophila | Q35694649 | ||
| A Whole-Chromosome Analysis of Meiotic Recombination in Drosophila melanogaster. | Q35771687 | ||
| Drosophila melanogaster: a case study of a model genomic sequence and its consequences | Q36336836 | ||
| Dynamics of Wolbachia pipientis Gene Expression Across the Drosophila melanogaster Life Cycle | Q36383193 | ||
| Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression | Q36417645 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P4510 | describes a project that uses | SQL | Q47607 |
| P433 | issue | 22 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Drosophila melanogaster | Q130888 |
| P304 | page(s) | 10655-10672 | |
| P577 | publication date | 2015-11-17 | |
| P1433 | published in | Nucleic Acids Research | Q135122 |
| P1476 | title | Unique transposon landscapes are pervasive across Drosophila melanogaster genomes | |
| P478 | volume | 43 |
| Q83225653 | , a short -element variant, weaponizes -transposase to severely impair development |
| Q92912658 | A Deep Learning Approach for Detecting Copy Number Variation in Next-Generation Sequencing Data |
| Q92358544 | A benchmark of transposon insertion detection tools using real data |
| Q64098993 | A unique cluster of insertions in the promoter region of a stress response gene in |
| Q42363947 | Abundant expression of somatic transposon-derived piRNAs throughout Tribolium castaneum embryogenesis |
| Q64096143 | Aging in the Drosophila ovary: contrasting changes in the expression of the piRNA machinery and mitochondria but no global release of transposable elements |
| Q62727456 | Computational tools to unmask transposable elements |
| Q55278602 | Conserved Noncoding Elements Influence the Transposable Element Landscape in Drosophila. |
| Q41101126 | Direct interrogation of the role of H3K9 in metazoan heterochromatin function. |
| Q38606669 | Drosophila PAF1 Modulates PIWI/piRNA Silencing Capacity |
| Q55481764 | Extensive exchange of transposable elements in the Drosophila pseudoobscura group. |
| Q41722909 | Genomic analysis of P elements in natural populations of Drosophila melanogaster |
| Q42292495 | LoRTE: Detecting transposon-induced genomic variants using low coverage PacBio long read sequences |
| Q36411782 | McClintock: An Integrated Pipeline for Detecting Transposable Element Insertions in Whole-Genome Shotgun Sequencing Data. |
| Q36626015 | Mobile genetic elements: in silico, in vitro, in vivo |
| Q92446588 | On the Population Dynamics of Junk: A Review on the Population Genomics of Transposable Elements |
| Q33667394 | Paternal Induction of Hybrid Dysgenesis in Drosophila melanogaster Is Weakly Correlated with Both P-Element and hobo Element Dosage. |
| Q90592048 | Pericentromeric heterochromatin is hierarchically organized and spatially contacts H3K9me2 islands in euchromatin |
| Q40984243 | Pervasive epigenetic effects of Drosophila euchromatic transposable elements impact their evolution. |
| Q96609299 | Piwi reduction in the aged niche eliminates germline stem cells via Toll-GSK3 signaling |
| Q41110305 | PoPoolationTE2: Comparative Population Genomics of Transposable Elements Using Pool-Seq. |
| Q90146995 | Population-specific dynamics and selection patterns of transposable element insertions in European natural populations |
| Q57036666 | Rapid Low-Cost Assembly of the Reference Genome Using Low-Coverage, Long-Read Sequencing |
| Q38925580 | Reexamining the P-Element Invasion of Drosophila melanogaster Through the Lens of piRNA Silencing |
| Q39365428 | Silencing of Transposable Elements by piRNAs in Drosophila: An Evolutionary Perspective |
| Q64238288 | Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila |
| Q90453866 | T-lex3: an accurate tool to genotype and estimate population frequencies of transposable elements using the latest short-read whole genome sequencing data |
| Q38642026 | Targeted identification of TE insertions in a Drosophila genome through hemi-specific PCR |
| Q59339829 | Ten things you should know about transposable elements |
| Q28600842 | The Arabidopsis thaliana mobilome and its impact at the species level |
| Q55279495 | The Role of Transposable Elements in Speciation. |
| Q93009143 | The evolutionary arms race between transposable elements and piRNAs in Drosophila melanogaster |
| Q91791724 | Transposable elements in individual genotypes of Drosophila simulans |
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