| review article | Q7318358 |
| scholarly article | Q13442814 |
| P356 | DOI | 10.1002/BIES.201700015 |
| P698 | PubMed publication ID | 28582591 |
| P50 | author | José Eduardo Kroll | Q91955795 |
| Sandro José de Souza | Q101029256 | ||
| P2093 | author name string | Gustavo Antonio de Souza | |
| Vandeclécio Lira da Silva | |||
| P2860 | cites work | Automated generation of heuristics for biological sequence comparison | Q21061202 |
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| TopHat: discovering splice junctions with RNA-Seq | Q24655505 | ||
| The PeptideAtlas project | Q25257813 | ||
| Whole human genome proteogenomic mapping for ENCODE cell line data: identifying protein-coding regions | Q27496606 | ||
| Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes | Q27860838 | ||
| Alternative isoform regulation in human tissue transcriptomes | Q27861118 | ||
| Mass spectrometry-based proteomics | Q28182890 | ||
| Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry | Q28252235 | ||
| Making proteomics data accessible and reusable: current state of proteomics databases and repositories | Q28648439 | ||
| Proteogenomics: concepts, applications and computational strategies | Q28649850 | ||
| MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification | Q29547200 | ||
| ProteomeXchange provides globally coordinated proteomics data submission and dissemination | Q29614806 | ||
| Andromeda: a peptide search engine integrated into the MaxQuant environment | Q29615816 | ||
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| Identification of rare alternative splicing events in MS/MS data reveals a significant fraction of alternative translation initiation sites | Q30870371 | ||
| PGTools: A Software Suite for Proteogenomic Data Analysis and Visualization | Q30908583 | ||
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| Flexible Data Analysis Pipeline for High-Confidence Proteogenomics | Q31139366 | ||
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| Assessing the contribution of alternative splicing to proteome diversity in Arabidopsis thaliana using proteomics data | Q33901421 | ||
| PASSEL: the PeptideAtlas SRMexperiment library | Q34154235 | ||
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| A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics | Q34207316 | ||
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| iPiG: integrating peptide spectrum matches into genome browser visualizations | Q34506492 | ||
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| Tools to covisualize and coanalyze proteomic data with genomes and transcriptomes: validation of genes and alternative mRNA splicing | Q35024624 | ||
| A note on the false discovery rate of novel peptides in proteogenomics | Q36129323 | ||
| The potential clinical impact of the release of two drafts of the human proteome | Q36519026 | ||
| State of the Human Proteome in 2014/2015 As Viewed through PeptideAtlas: Enhancing Accuracy and Coverage through the AtlasProphet | Q36584704 | ||
| PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows | Q36638849 | ||
| SPLOOCE: a new portal for the analysis of human splicing variants. | Q36684601 | ||
| Proteomics studies confirm the presence of alternative protein isoforms on a large scale | Q37038574 | ||
| Discovery and mass spectrometric analysis of novel splice-junction peptides using RNA-Seq | Q37072907 | ||
| Combining results of multiple search engines in proteomics | Q37160902 | ||
| Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins | Q39406080 | ||
| Addressing statistical biases in nucleotide-derived protein databases for proteogenomic search strategies | Q41894428 | ||
| Analyzing the first drafts of the human proteome. | Q43154764 | ||
| Trypsin cleaves exclusively C-terminal to arginine and lysine residues | Q44807551 | ||
| P433 | issue | 7 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | data visualization | Q6504956 |
| P577 | publication date | 2017-06-05 | |
| P1433 | published in | BioEssays | Q4914614 |
| P1476 | title | A tool for integrating genetic and mass spectrometry-based peptide data: Proteogenomics Viewer: PV: A genome browser-like tool, which includes MS data visualization and peptide identification parameters | |
| P478 | volume | 39 |
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