The spliceosome: a flexible, reversible macromolecular machine

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The spliceosome: a flexible, reversible macromolecular machine is …
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P356DOI10.1016/J.TIBS.2012.02.009
P932PMC publication ID3508674
P698PubMed publication ID22480731
P5875ResearchGate publication ID223962299

P50authorMelissa J. MooreQ85954688
P2093author name stringAaron A Hoskins
P2860cites workKinetic Proofreading: A New Mechanism for Reducing Errors in Biosynthetic Processes Requiring High SpecificityQ24563898
U4 small nuclear RNA dissociates from a yeast spliceosome and does not participate in the subsequent splicing reactionQ24594525
Early commitment of yeast pre-mRNA to the spliceosome pathwayQ24627964
Prp43p is a DEAH-box spliceosome disassembly factor essential for ribosome biogenesisQ27936468
Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal componentsQ27937542
The tandem affinity purification (TAP) method: a general procedure of protein complex purificationQ28131621
The spliceosome: design principles of a dynamic RNP machineQ28131809
Prp43 bound at different sites on the pre-rRNA performs distinct functions in ribosome synthesisQ28265874
Pre-mRNA splicing: awash in a sea of proteinsQ29547272
Pre-mRNA processing reaches back to transcription and ahead to translationQ29615045
Expansion of the eukaryotic proteome by alternative splicingQ29615083
Mechanisms of alternative splicing regulation: insights from molecular and genomics approachesQ29615084
Allosteric cascade of spliceosome activationQ29615086
Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicingQ29620837
Conformational dynamics of single pre-mRNA molecules during in vitro splicingQ30053690
The role of exon sequences in C complex spliceosome structureQ30491940
Viewing dynamic assembly of molecular complexes by multi-wavelength single-molecule fluorescenceQ33243370
Transcript specificity in yeast pre-mRNA splicing revealed by mutations in core spliceosomal componentsQ33280145
Visualizing the splicing of single pre-mRNA molecules in whole cell extractQ33306330
A putative ATP binding protein influences the fidelity of branchpoint recognition in yeast splicingQ33838525
Spliceosome discards intermediates via the DEAH box ATPase Prp43pQ33933327
A conformational rearrangement in the spliceosome is dependent on PRP16 and ATP hydrolysisQ33938648
A computational analysis of sequence features involved in recognition of short intronsQ33944374
Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1Q33960716
Genomewide analysis of mRNA processing in yeast using splicing-specific microarraysQ34126595
The spliceosome: the most complex macromolecular machine in the cell?Q34278742
Yeast pre-mRNA splicing: methods, mechanisms, and machineryQ34694763
Do-it-yourself guide: how to use the modern single-molecule toolkitQ34782759
The evolutionarily conserved core design of the catalytic activation step of the yeast spliceosomeQ35014709
Real-time imaging of cotranscriptional splicing reveals a kinetic model that reduces noise: implications for alternative splicing regulationQ35018262
Real-time observation of transcription initiation and elongation on an endogenous yeast geneQ35155140
Diverse environmental stresses elicit distinct responses at the level of pre-mRNA processing in yeastQ35157735
Single-molecule imaging of transcriptionally coupled and uncoupled splicingQ35633440
Rapid, transcript-specific changes in splicing in response to environmental stressQ36151037
Cryo-electron microscopy of spliceosomal componentsQ36475417
Prp43: An RNA helicase-like factor involved in spliceosome disassemblyQ36607359
Where in the cell is the minor spliceosome?Q36735152
The DEAH box ATPases Prp16 and Prp43 cooperate to proofread 5' splice site cleavage during pre-mRNA splicingQ37043127
Exon ligation is proofread by the DExD/H-box ATPase Prp22pQ37059609
Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex.Q37099916
"Nought may endure but mutability": spliceosome dynamics and the regulation of splicingQ37197189
Recognition of atypical 5' splice sites by shifted base-pairing to U1 snRNA.Q37285454
Identification of alternative splicing regulators by RNA interference in DrosophilaQ37619393
Cross-talk in transcription, splicing and chromatin: who makes the first call?Q37791583
Single molecule enzymology: watching the reactionQ38351984
The differential interaction of snRNPs with pre-mRNA reveals splicing kinetics in living cellsQ39648201
Insights into branch nucleophile positioning and activation from an orthogonal pre-mRNA splicing system in yeastQ39978710
An RNA switch at the 5' splice site requires ATP and the DEAD box protein Prp28pQ41607972
Exon, intron and splice site locations in the spliceosomal B complexQ42087609
trans-splicing to spliceosomal U2 snRNA suggests disruption of branch site-U2 pairing during pre-mRNA splicingQ42381501
Metal-ion coordination by U6 small nuclear RNA contributes to catalysis in the spliceosome.Q42679830
Ordered and dynamic assembly of single spliceosomesQ42726090
Release of SF3 from the intron branchpoint activates the first step of pre-mRNA splicingQ42914749
Mechanistic insights from reversible splicing catalysisQ42953067
Competition between the ATPase Prp5 and branch region-U2 snRNA pairing modulates the fidelity of spliceosome assemblyQ43049651
Requirement of the RNA helicase-like protein PRP22 for release of messenger RNA from spliceosomesQ44165085
Deciphering 3'ss selection in the yeast genome reveals an RNA thermosensor that mediates alternative splicingQ44838435
Preparation of fluorescent pre-mRNA substrates for an smFRET study of pre-mRNA splicing in yeastQ45720413
Opposing classes of prp8 alleles modulate the transition between the catalytic steps of pre-mRNA splicingQ45828510
RBM5/Luca-15/H37 regulates Fas alternative splice site pairing after exon definition.Q46050971
Commitment to splice site pairing coincides with A complex formationQ46357841
A mechanism to enhance mRNA splicing fidelity: the RNA-dependent ATPase Prp16 governs usage of a discard pathway for aberrant lariat intermediatesQ46565000
Suppression of multiple substrate mutations by spliceosomal prp8 alleles suggests functional correlations with ribosomal ambiguity mutantsQ47654036
Reverse self-splicing of group II intron RNAs in vitroQ47858247
Isolation of an active step I spliceosome and composition of its RNP coreQ50336090
Repositioning of the reaction intermediate within the catalytic center of the spliceosome.Q52568800
The yeast RNA gene products are essential for mRNA splicing in vitroQ59198319
Bimolecular exon ligation by the human spliceosomeQ73407427
Dynamics of the U1 Small Nuclear Ribonucleoprotein during Yeast Spliceosome AssemblyQ73485917
Ten commandments of enzymology, amendedQ79165759
Both catalytic steps of nuclear pre-mRNA splicing are reversibleQ81534595
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectmacromoleculeQ178593
spliceosomeQ915868
P1104number of pages10
P304page(s)179-188
P577publication date2012-04-03
P1433published inTrends in Biochemical SciencesQ1565711
P1476titleThe spliceosome: a flexible, reversible macromolecular machine
P478volume37