Retrotransposon target site selection by imitation of a cellular protein

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Retrotransposon target site selection by imitation of a cellular protein is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/MCB.01502-07
P932PMC publication ID2258757
P698PubMed publication ID18086891

P2093author name stringDaniel F Voytas
Peter G Fuerst
Robert A Dick
Clarice Schmidt
Troy L Brady
P2860cites workA previously unidentified host protein protects retroviral DNA from autointegrationQ24309927
Transient and stable knockdown of the integrase cofactor LEDGF/p75 reveals its role in the replication cycle of human immunodeficiency virusQ24538808
Reverse two-hybrid and one-hybrid systems to detect dissociation of protein-protein and DNA-protein interactionsQ24596251
Multiple pathways for telomere tethering: functional implications of subnuclear position for heterochromatin formation.Q35690852
HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modificationsQ35914779
A nuclear envelope protein linking nuclear pore basket assembly, SUMO protease regulation, and mRNA surveillanceQ36119061
Retroviral DNA integration: HIV and the role of LEDGF/p75.Q36490669
The yeast silent information regulator Sir4p anchors and partitions plasmidsQ36573942
Modulating target site selection during human immunodeficiency virus DNA integration in vitro with an engineered tethering factorQ38309659
Targeting of the yeast Ty5 retrotransposon to silent chromatin is mediated by interactions between integrase and Sir4pQ39528168
Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retrotransposonsQ39594329
Fission yeast retrotransposon Tf1 integration is targeted to 5' ends of open reading framesQ39607366
Tagging chromatin with retrotransposons: target specificity of the Saccharomyces Ty5 retrotransposon changes with the chromosomal localization of Sir3p and Sir4pQ40445702
Target site selection in transpositionQ41550231
TFIIIB subunit Bdp1p is required for periodic integration of the Ty1 retrotransposon and targeting of Isw2p to S. cerevisiae tDNAsQ41763300
Identification of the LEDGF/p75 HIV-1 integrase-interaction domain and NLS reveals NLS-independent chromatin tetheringQ42816444
Transcriptional silencing and laminsQ43713560
The inner-nuclear-envelope protein emerin regulates HIV-1 infectivityQ43842116
Quantitative phosphoproteomics applied to the yeast pheromone signaling pathwayQ45234630
Ty3 integrates within the region of RNA polymerase III transcription initiationQ46051507
Mutagenic PCR.Q46793711
Integration of the yeast retrotransposon Ty1 is targeted to regions upstream of genes transcribed by RNA polymerase IIIQ70993643
Targeting of SIR1 protein establishes transcriptional silencing at HM loci and telomeres in yeastQ72560058
Yeast retrotransposons: finding a nice quiet neighborhoodQ74764328
Phosphorylation regulates integration of the yeast Ty5 retrotransposon into heterochromatinQ80648321
Barrier-to-autointegration factor: major roles in chromatin decondensation and nuclear assemblyQ24671798
LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integrationQ24671948
Barrier-to-autointegration factor (BAF) bridges DNA in a discrete, higher-order nucleoprotein complexQ24672697
Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferencesQ24798872
The Sir4 C-terminal coiled coil is required for telomeric and mating type silencing in Saccharomyces cerevisiaeQ27642629
Sum1 and Hst1 repress middle sporulation-specific gene expression during mitosis in Saccharomyces cerevisiaeQ27931680
Evidence that a complex of SIR proteins interacts with the silencer and telomere-binding protein RAP1.Q27933472
The Brf and TATA-binding protein subunits of the RNA polymerase III transcription factor IIIB mediate position-specific integration of the gypsy-like element, Ty3.Q27935607
Rap1-Sir4 binding independent of other Sir, yKu, or histone interactions initiates the assembly of telomeric heterochromatin in yeastQ27936518
Esc1, a nuclear periphery protein required for Sir4-based plasmid anchoring and partitioningQ27937349
Identification and characterization of YLR328W, the Saccharomyces cerevisiae structural gene encoding NMN adenylyltransferase. Expression and characterization of the recombinant enzymeQ27938021
The chromo domain protein chd1p from budding yeast is an ATP-dependent chromatin-modifying factorQ27938755
New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiaeQ28131599
Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeastQ28131604
A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettesQ28131622
Distinct functional domains in emerin bind lamin A and DNA-bridging protein BAFQ28215654
An essential role for LEDGF/p75 in HIV integrationQ28262502
Lens epithelium-derived growth factor/p75 prevents proteasomal degradation of HIV-1 integraseQ28287194
Transcription start regions in the human genome are favored targets for MLV integrationQ29618456
HIV-1 integration in the human genome favors active genes and local hotspotsQ29618457
The importance of being proline: the interaction of proline-rich motifs in signaling proteins with their cognate domainsQ29618469
Two novel related yeast nucleoporins Nup170p and Nup157p: complementation with the vertebrate homologue Nup155p and functional interactions with the yeast nuclear pore-membrane protein Pom152pQ29619290
Identification of a new family of tissue-specific basic helix-loop-helix proteins with a two-hybrid systemQ29620436
Ty5 gag mutations increase retrotransposition and suggest a role for hydrogen bonding in the function of the nucleocapsid zinc finger.Q30825160
Retroviral DNA integration: viral and cellular determinants of target-site selectionQ33247467
Expression and processing of proteins encoded by the Saccharomyces retrotransposon Ty5Q33837612
A long terminal repeat retrotransposon of fission yeast has strong preferences for specific sites of insertionQ33905779
The molecular biology of the SIR proteinsQ34448539
A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere lengthQ34514337
Transcriptional co-activator p75 binds and tethers the Myc-interacting protein JPO2 to chromatinQ34532019
Integration by designQ35021562
Controlling integration specificity of a yeast retrotransposonQ35022347
Mitogen-activated protein kinases: versatile transducers for cell signalingQ35231791
Targeting survival: integration site selection by retroviruses and LTR-retrotransposonsQ35563809
Wild-type levels of human immunodeficiency virus type 1 infectivity in the absence of cellular emerin proteinQ35634356
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectretrotransposonQ413988
P304page(s)1230-1239
P577publication date2007-12-17
P1433published inMolecular and Cellular BiologyQ3319478
P1476titleRetrotransposon target site selection by imitation of a cellular protein
P478volume28

Reverse relations

cites work (P2860)
Q37616459Chromatin tethering and retroviral integration: recent discoveries and parallels with DNA viruses
Q35333511Dynamic interactions between transposable elements and their hosts
Q36466270Evolutionary analysis of heterochromatin protein compatibility by interspecies complementation in Saccharomyces
Q26771437Insertion of Retrotransposons at Chromosome Ends: Adaptive Response to Chromosome Maintenance
Q64066587Protein-protein interactions of the nicotinamide/nicotinate mononucleotide adenylyltransferase of Leishmania braziliensis
Q28596842Retroviral DNA Integration
Q35842252Role of the PWWP domain of lens epithelium-derived growth factor (LEDGF)/p75 cofactor in lentiviral integration targeting
Q36646571Structure of the Brd4 ET domain bound to a C-terminal motif from γ-retroviral integrases reveals a conserved mechanism of interaction
Q90085312The Sir4 H-BRCT domain interacts with phospho-proteins to sequester and repress yeast heterochromatin
Q34804306The take and give between retrotransposable elements and their hosts

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