| scholarly article | Q13442814 |
| P2093 | author name string | John F Marko | |
| Ranjith Padinhateeri | |||
| Hungyo Kharerin | |||
| Paike J Bhat | |||
| P2860 | cites work | Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation | Q21563549 |
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| Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae. | Q27932151 | ||
| Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex | Q27935940 | ||
| Transcriptional activation by recruitment | Q29615048 | ||
| Activator control of nucleosome occupancy in activation and repression of transcription | Q33395818 | ||
| Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneity | Q33790088 | ||
| Global histone acetylation and deacetylation in yeast | Q42496713 | ||
| Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements. | Q42573541 | ||
| A novel strategy of transcription regulation by intragenic nucleosome ordering | Q42637675 | ||
| The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing | Q46182787 | ||
| Transcriptional control: rheostat converted to on/off switch | Q46965292 | ||
| Removal of promoter nucleosomes by disassembly rather than sliding in vivo | Q47401543 | ||
| Nucleosomes unfold completely at a transcriptionally active promoter. | Q51599596 | ||
| Nucleosome mediated crosstalk between transcription factors at eukaryotic enhancers. | Q52722392 | ||
| Exact stochastic simulation of coupled chemical reactions | Q56536017 | ||
| Kinetic Control of Nucleosome Displacement by ISWI/ACF Chromatin Remodelers | Q60195193 | ||
| Nucleosome-depleted regions in cell-cycle-regulated promoters ensure reliable gene expression in every cell cycle | Q33839753 | ||
| The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes | Q33849437 | ||
| The structure of DNA in the nucleosome core | Q33965908 | ||
| A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome | Q34186316 | ||
| Chromatin remodeling in vivo: evidence for a nucleosome sliding mechanism | Q34278907 | ||
| Nucleosome-mediated cooperativity between transcription factors | Q34450175 | ||
| Nucleosomal promoter variation generates gene expression noise | Q34752991 | ||
| The DNA-encoded nucleosome organization of a eukaryotic genome | Q34907179 | ||
| Linking stochastic fluctuations in chromatin structure and gene expression | Q34934209 | ||
| Nucleosome positioning in a model of active chromatin remodeling enzymes | Q34977769 | ||
| The logic of chromatin architecture and remodelling at promoters | Q35001999 | ||
| Multiple sequence-specific factors generate the nucleosome-depleted region on CLN2 promoter. | Q35058171 | ||
| SWI/SNF has intrinsic nucleosome disassembly activity that is dependent on adjacent nucleosomes | Q35181133 | ||
| Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators | Q35206109 | ||
| Chromatin remodeling by ATP-dependent molecular machines. | Q35591861 | ||
| Micromanipulation studies of chromatin fibers in Xenopus egg extracts reveal ATP-dependent chromatin assembly dynamics | Q35613351 | ||
| Statistical distributions of nucleosomes: nonrandom locations by a stochastic mechanism | Q36058611 | ||
| Chromatin decouples promoter threshold from dynamic range | Q36732068 | ||
| Two strategies for gene regulation by promoter nucleosomes | Q36804735 | ||
| A quantitative model of transcription factor-activated gene expression | Q37226832 | ||
| Using DNA mechanics to predict in vitro nucleosome positions and formation energies. | Q37298599 | ||
| What controls nucleosome positions? | Q37549548 | ||
| Nucleosomes accelerate transcription factor dissociation. | Q37631853 | ||
| The transactivation domain of Pho4 is required for nucleosome disruption at the PHO5 promoter. | Q37637334 | ||
| Gene regulation by nucleosome positioning | Q37787412 | ||
| The yeast PHO5 promoter: from single locus to systems biology of a paradigm for gene regulation through chromatin | Q38246218 | ||
| Dynamic changes in nucleosome occupancy are not predictive of gene expression dynamics but are linked to transcription and chromatin regulators | Q38327527 | ||
| In vitro reconstitution of PHO5 promoter chromatin remodeling points to a role for activator-nucleosome competition in vivo | Q38343127 | ||
| Statistical positioning of nucleosomes by specific protein-binding to an upstream activating sequence in yeast | Q38346135 | ||
| Nucleosome retention and the stochastic nature of promoter chromatin remodeling for transcription | Q38789498 | ||
| A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome | Q41336121 | ||
| DNA methylation regulated nucleosome dynamics | Q41363017 | ||
| Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast | Q41379504 | ||
| Intrinsic coupling of lagging-strand synthesis to chromatin assembly. | Q41457868 | ||
| Quantitative analysis of the transcription control mechanism | Q41472569 | ||
| A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding | Q41783832 | ||
| Selective removal of promoter nucleosomes by the RSC chromatin-remodeling complex | Q41858202 | ||
| Nuclease hypersensitive regions with adjacent positioned nucleosomes mark the gene boundaries of the PHO5/PHO3 locus in yeast | Q41974508 | ||
| Nucleosome positioning and kinetics near transcription-start-site barriers are controlled by interplay between active remodeling and DNA sequence | Q42132377 | ||
| A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization | Q42146780 | ||
| P2507 | corrigendum / erratum | Corrigendum: Role of transcription factor-mediated nucleosome disassembly in PHO5 gene expression | Q42640727 |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 20319 | |
| P577 | publication date | 2016-02-04 | |
| P1433 | published in | Scientific Reports | Q2261792 |
| P1476 | title | Role of transcription factor-mediated nucleosome disassembly in PHO5 gene expression | |
| P478 | volume | 6 |
| Q55255402 | Coupling of replisome movement with nucleosome dynamics can contribute to the parent-daughter information transfer. | cites work | P2860 |
| Q42640727 | Corrigendum: Role of transcription factor-mediated nucleosome disassembly in PHO5 gene expression | main subject | P921 |
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