scholarly article | Q13442814 |
P356 | DOI | 10.1038/NSMB1170 |
P698 | PubMed publication ID | 17099699 |
P50 | author | Geeta J. Narlikar | Q88384903 |
P2093 | author name string | Janet G Yang | |
Elena Sevastopoulos | |||
Tina Shahian Madrid | |||
P2860 | cites work | Dynamic Properties of Nucleosomes during Thermal and ATP-Driven Mobilization | Q39940474 |
Acf1 confers unique activities to ACF/CHRAC and promotes the formation rather than disruption of chromatin in vivo | Q40483257 | ||
Generation and interconversion of multiple distinct nucleosomal states as a mechanism for catalyzing chromatin fluidity | Q40758626 | ||
Preparation of nucleosome core particle from recombinant histones | Q40947701 | ||
Staying on track: common features of DNA helicases and microtubule motors. | Q41740154 | ||
The ISWI chromatin-remodeling protein is required for gene expression and the maintenance of higher order chromatin structure in vivo | Q41745261 | ||
Antagonistic forces that position nucleosomes in vivo. | Q42690299 | ||
Biochemical analysis of chromatin containing recombinant Drosophila core histones | Q43843410 | ||
Distinct strategies to make nucleosomal DNA accessible | Q44455871 | ||
Spatial contacts and nucleosome step movements induced by the NURF chromatin remodeling complex | Q44985666 | ||
Visualization of Rad54, a chromatin remodeling protein, translocating on single DNA molecules | Q46202156 | ||
A 'loop recapture' mechanism for ACF-dependent nucleosome remodeling | Q46605006 | ||
ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor | Q46700727 | ||
Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II. | Q47070590 | ||
ATP-dependent histone octamer sliding mediated by the chromatin remodeling complex NURF. | Q47070794 | ||
Role of nucleosome remodeling factor NURF in transcriptional activation of chromatin | Q47071514 | ||
ISWI induces nucleosome sliding on nicked DNA. | Q47072071 | ||
ISWI Is an ATP-Dependent Nucleosome Remodeling Factor | Q57902879 | ||
New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning | Q74352513 | ||
Human ACF1 alters the remodeling strategy of SNF2h | Q80026065 | ||
Requirement of RSF and FACT for transcription of chromatin templates in vitro | Q22008503 | ||
HuCHRAC, a human ISWI chromatin remodelling complex contains hACF1 and two novel histone-fold proteins | Q22254462 | ||
Long-range nucleosome ordering is associated with gene silencing in Drosophila melanogaster pericentric heterochromatin | Q24550975 | ||
Direct observation of DNA distortion by the RSC complex | Q24599789 | ||
ACF consists of two subunits, Acf1 and ISWI, that function cooperatively in the ATP-dependent catalysis of chromatin assembly | Q24602406 | ||
A genomic code for nucleosome positioning | Q24650238 | ||
A family of chromatin remodeling factors related to Williams syndrome transcription factor | Q24673669 | ||
Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution | Q27639217 | ||
Chromatin remodeling by RSC involves ATP-dependent DNA translocation | Q27935047 | ||
Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes | Q27938565 | ||
The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p | Q27939304 | ||
Functional differences between the human ATP-dependent nucleosome remodeling proteins BRG1 and SNF2H | Q28204516 | ||
Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome | Q28300498 | ||
Nucleosome movement by CHRAC and ISWI without disruption or trans-displacement of the histone octamer. | Q33867495 | ||
Translocation of sigma(70) with RNA polymerase during transcription: fluorescence resonance energy transfer assay for movement relative to DNA. | Q33954278 | ||
GAL4 directs nucleosome sliding induced by NURF. | Q34086198 | ||
Chromatin remodeling in vivo: evidence for a nucleosome sliding mechanism | Q34278907 | ||
Topography of the ISW2-nucleosome complex: insights into nucleosome spacing and chromatin remodeling | Q34571819 | ||
Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae | Q35192123 | ||
The contradictory definitions of heterochromatin: transcription and silencing. | Q36408543 | ||
Functional role of extranucleosomal DNA and the entry site of the nucleosome in chromatin remodeling by ISW2. | Q37598822 | ||
Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression | Q38297257 | ||
Evidence for DNA translocation by the ISWI chromatin-remodeling enzyme | Q38357160 | ||
Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling | Q39644488 | ||
P433 | issue | 12 | |
P304 | page(s) | 1078-1083 | |
P577 | publication date | 2006-11-12 | |
P1433 | published in | Nature Structural & Molecular Biology | Q1071739 |
P1476 | title | The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing | |
P478 | volume | 13 |
Q91826886 | A basic motif anchoring ISWI to nucleosome acidic patch regulates nucleosome spacing |
Q35163944 | A nucleotide-driven switch regulates flanking DNA length sensing by a dimeric chromatin remodeler |
Q37787527 | A proposal for kinetic proof reading by ISWI family chromatin remodeling motors |
Q36508671 | ACF catalyses chromatosome movements in chromatin fibres |
Q46713379 | ATAC is a double histone acetyltransferase complex that stimulates nucleosome sliding |
Q36808347 | ATP-dependent chromatin remodeling enzymes: two heads are not better, just different |
Q34627244 | ATP-dependent chromatin remodeling: genetics, genomics and mechanisms |
Q26770154 | An Overview of Chromatin-Regulating Proteins in Cells |
Q37384729 | Analysis of individual remodeled nucleosomes reveals decreased histone-DNA contacts created by hSWI/SNF. |
Q64927759 | Asymmetry between the two acidic patches dictates the direction of nucleosome sliding by the ISWI chromatin remodeler. |
Q89637741 | Beads on a string-nucleosome array arrangements and folding of the chromatin fiber |
Q37117342 | CHD4 Is a Peripheral Component of the Nucleosome Remodeling and Deacetylase Complex |
Q35808490 | Chromatin Remodelers: From Function to Dysfunction |
Q42144733 | Chromatin remodelers act globally, sequence positions nucleosomes locally |
Q58611949 | Chromatin remodelers couple inchworm motion with twist-defect formation to slide nucleosomal DNA |
Q39539723 | Chromatin remodeling by imitation switch (ISWI) class ATP-dependent remodelers is stimulated by histone variant H2A.Z. |
Q36436834 | Chromatin remodeling by the CHD7 protein is impaired by mutations that cause human developmental disorders |
Q36994145 | Chromatin remodeling: insights and intrigue from single-molecule studies |
Q41189289 | Chromatin structure and DNA damage repair |
Q35126513 | Chromatin targeting signals, nucleosome positioning mechanism and non-coding RNA-mediated regulation of the chromatin remodeling complex NoRC. |
Q34699862 | Closing the gap between single molecule and bulk FRET analysis of nucleosomes |
Q40735929 | Comparative Genomics Reveals Chd1 as a Determinant of Nucleosome Spacing in Vivo |
Q40653203 | Computational study of remodeling in a nucleosomal array |
Q42321964 | Concerted regulation of ISWI by an autoinhibitory domain and the H4 N-terminal tail |
Q27939853 | Conformational changes associated with template commitment in ATP-dependent chromatin remodeling by ISW2 |
Q55255402 | Coupling of replisome movement with nucleosome dynamics can contribute to the parent-daughter information transfer. |
Q41827289 | Crosstalk within a functional INO80 complex dimer regulates nucleosome sliding |
Q83231517 | Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome |
Q36580964 | Decoupling nucleosome recognition from DNA binding dramatically alters the properties of the Chd1 chromatin remodeler |
Q64120205 | Direct observation of coordinated DNA movements on the nucleosome during chromatin remodelling |
Q64907692 | Distinct requirements of linker DNA and transcriptional activators in promoting SAGA-mediated nucleosome acetylation. |
Q42631191 | Distortion of histone octamer core promotes nucleosome mobilization by a chromatin remodeler |
Q33608800 | Divergent human remodeling complexes remove nucleosomes from strong positioning sequences |
Q35209444 | Diversity of operation in ATP-dependent chromatin remodelers |
Q35686044 | Dynamic regulation of transcription factors by nucleosome remodeling |
Q37649523 | Dynamic unwrapping of nucleosomes by HsRAD51 that includes sliding and rotational motion of histone octamers |
Q33716234 | Dynamics of nucleosome remodelling by individual ACF complexes |
Q27010566 | Electron microscopy studies of nucleosome remodelers |
Q37951608 | Epigenetic landscape of pluripotent stem cells |
Q41005325 | Establishment of a promoter-based chromatin architecture on recently replicated DNA can accommodate variable inter-nucleosome spacing |
Q47962320 | Expansion of the ISWI chromatin remodeler family with new active complexes. |
Q37156601 | Expedient placement of two fluorescent dyes for investigating dynamic DNA protein interactions in real time. |
Q35598828 | Extranucleosomal DNA binding directs nucleosome sliding by Chd1 |
Q47780886 | Fokker-Planck description of single nucleosome repositioning by dimeric chromatin remodelers |
Q34985690 | From DNA sequence to transcriptional behaviour: a quantitative approach |
Q26786457 | Functional Insights into Chromatin Remodelling from Studies on CHARGE Syndrome |
Q24633178 | Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription |
Q36163466 | Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription. |
Q90441129 | Generation of Remosomes by the SWI/SNF Chromatin Remodeler Family |
Q33611702 | Genome-wide views of chromatin structure |
Q37653281 | Histone H3 lysine 14 (H3K14) acetylation facilitates DNA repair in a positioned nucleosome by stabilizing the binding of the chromatin Remodeler RSC (Remodels Structure of Chromatin) |
Q34051334 | Histone H4 tail mediates allosteric regulation of nucleosome remodelling by linker DNA |
Q34447144 | Human CHD2 is a chromatin assembly ATPase regulated by its chromo- and DNA-binding domains |
Q27931272 | ISWI and CHD chromatin remodelers bind promoters but act in gene bodies |
Q38285215 | ISWI chromatin remodeling complexes in the DNA damage response |
Q26823921 | ISWI chromatin remodeling: one primary actor or a coordinated effort? |
Q36825396 | ISWI remodelers slide nucleosomes with coordinated multi-base-pair entry steps and single-base-pair exit steps |
Q35091749 | ISWI remodelling of physiological chromatin fibres acetylated at lysine 16 of histone H4. |
Q33910348 | ISWI remodels nucleosomes through a random walk |
Q47403190 | In silico evidence for sequence-dependent nucleosome sliding. |
Q51175089 | Interdomain Communication of the Chd1 Chromatin Remodeler across the DNA Gyres of the Nucleosome. |
Q27936457 | Kinetic model for the ATP-dependent translocation of Saccharomyces cerevisiae RSC along double-stranded DNA. |
Q38492535 | Kinetic proofreading in chromatin remodeling: the case of ISWI/ACF. |
Q60489236 | Lighting up nucleosome spacing |
Q36192757 | MacroH2A allows ATP-dependent chromatin remodeling by SWI/SNF and ACF complexes but specifically reduces recruitment of SWI/SNF. |
Q38126255 | Mechanisms and functions of ATP-dependent chromatin-remodeling enzymes |
Q34165927 | Mechanisms of ATP-dependent nucleosome sliding |
Q39312199 | Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes |
Q37180651 | Mechanisms that specify promoter nucleosome location and identity |
Q47126896 | Mechanistic Insights into Autoinhibition of the Oncogenic Chromatin Remodeler ALC1. |
Q41093387 | Monitoring conformational dynamics with single-molecule fluorescence energy transfer: applications in nucleosome remodeling. |
Q42261914 | Non-canonical reader modules of BAZ1A promote recovery from DNA damage. |
Q34251192 | Nucleosome Interactions and Stability in an Ordered Nucleosome Array Model System |
Q36936033 | Nucleosome breathing and remodeling constrain CRISPR-Cas9 function |
Q37785984 | Nucleosome dynamics and epigenetic stability. |
Q36589175 | Nucleosome mobilization by ISW2 requires the concerted action of the ATPase and SLIDE domains |
Q42132377 | Nucleosome positioning and kinetics near transcription-start-site barriers are controlled by interplay between active remodeling and DNA sequence |
Q37885611 | Nucleosome positioning in Saccharomyces cerevisiae. |
Q34977769 | Nucleosome positioning in a model of active chromatin remodeling enzymes |
Q38296158 | Nucleosome positioning in yeasts: methods, maps, and mechanisms. |
Q37693981 | Nucleosome sliding by Chd1 does not require rigid coupling between DNA-binding and ATPase domains |
Q38134612 | Nucleosome sliding mechanisms: new twists in a looped history. |
Q39301715 | Nucleosome spacing generated by ISWI and CHD1 remodelers is constant regardless of nucleosome density. |
Q26852536 | Post-translational modifications of histones that influence nucleosome dynamics |
Q24653816 | Predicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activities |
Q33910372 | Quantitative determination of binding of ISWI to nucleosomes and DNA shows allosteric regulation of DNA binding by nucleotides |
Q35096258 | Regulating the chromatin landscape: structural and mechanistic perspectives |
Q38177727 | Regulation of ISWI chromatin remodelling activity |
Q37249146 | Relating periodicity of nucleosome organization and gene regulation |
Q36542505 | Role of transcription factor-mediated nucleosome disassembly in PHO5 gene expression |
Q36624546 | Stepwise nucleosome translocation by RSC remodeling complexes |
Q46003847 | Stochastic description of single nucleosome repositioning by ACF remodelers. |
Q42085063 | Stopped-flow fluorescence resonance energy transfer for analysis of nucleosome dynamics |
Q56530225 | Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome |
Q41809074 | The ATP-Dependent Remodeler RSC Transfers Histone Dimers and Octamers through the Rapid Formation of an Unstable Encounter Intermediate |
Q44496055 | The ATPase domain of ISWI is an autonomous nucleosome remodeling machine |
Q37264314 | The Chd1 chromatin remodeler can sense both entry and exit sides of the nucleosome |
Q37580481 | The Chd1 chromatin remodeler shifts hexasomes unidirectionally. |
Q40376693 | The DNA sequence-dependence of nucleosome positioning in vivo and in vitro |
Q27668078 | The DNA-binding domain of the Chd1 chromatin-remodelling enzyme contains SANT and SLIDE domains |
Q92458356 | The Drosophila Chromodomain Protein Kismet Activates Steroid Hormone Receptor Transcription to Govern Axon Pruning and Memory In Vivo |
Q36442451 | The N-terminal Region of Chromodomain Helicase DNA-binding Protein 4 (CHD4) Is Essential for Activity and Contains a High Mobility Group (HMG) Box-like-domain That Can Bind Poly(ADP-ribose). |
Q35048885 | The RSC chromatin remodelling ATPase translocates DNA with high force and small step size |
Q51141104 | The Sequence of Nucleosomal DNA Modulates Sliding by the Chd1 Chromatin Remodeler. |
Q49920412 | The Yeast INO80 Complex Operates as a Tunable DNA Length-Sensitive Switch to Regulate Nucleosome Sliding. |
Q33849437 | The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes |
Q27678778 | The conformational flexibility of the C-terminus of histone H4 promotes histone octamer and nucleosome stability and yeast viability |
Q40761993 | The histone H4 tail regulates the conformation of the ATP-binding pocket in the SNF2h chromatin remodeling enzyme |
Q52319102 | The nucleosomal acidic patch relieves auto-inhibition by the ISWI remodeler SNF2h. |
Q35151644 | The sequence-specific transcription factor c-Jun targets Cockayne syndrome protein B to regulate transcription and chromatin structure. |
Q41978659 | The site-specific installation of methyl-lysine analogs into recombinant histones |
Q33947091 | The tumor suppressor chromodomain helicase DNA-binding protein 5 (CHD5) remodels nucleosomes by unwrapping |
Q38667564 | Theoretical estimates of exposure timescales of protein binding sites on DNA regulated by nucleosome kinetics |
Q34074380 | UV damage in DNA promotes nucleosome unwrapping |
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