Asymmetry between the two acidic patches dictates the direction of nucleosome sliding by the ISWI chromatin remodeler.

scientific article published on 16 May 2019

Asymmetry between the two acidic patches dictates the direction of nucleosome sliding by the ISWI chromatin remodeler. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.7554/ELIFE.45472
P932PMC publication ID6546392
P698PubMed publication ID31094676

P50authorRobert F LevendoskyQ64927838
Gregory D. BowmanQ88889693
P2093author name stringGregory D Bowman
P2860cites workCrystal structure of the nucleosome core particle at 2.8 A resolutionQ22122355
Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolutionQ27639217
Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWIQ27642328
The Chromodomains of the Chd1 Chromatin Remodeler Regulate DNA Access to the ATPase MotorQ27664415
Structure and mechanism of the chromatin remodelling factor ISW1aQ27667598
The DNA-binding domain of the Chd1 chromatin-remodelling enzyme contains SANT and SLIDE domainsQ27668078
Multivalent Interactions by the Set8 Histone Methyltransferase With Its Nucleosome SubstrateQ27704231
High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2Q27930945
Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchangeQ27932433
Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcriptionQ27934409
Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structureQ27935460
Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexesQ27938565
Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosomeQ28300498
Histone H4-K16 acetylation controls chromatin structure and protein interactionsQ29614521
Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complexQ29617854
The chromatin remodeller ACF acts as a dimeric motor to space nucleosomesQ33849437
Expression and purification of recombinant histones and nucleosome reconstitutionQ33914576
Histone H4 tail mediates allosteric regulation of nucleosome remodelling by linker DNAQ34051334
GAL4 directs nucleosome sliding induced by NURF.Q34086198
Human SWI/SNF generates abundant, structurally altered dinucleosomes on polynucleosomal templatesQ34230856
Reconstitution of nucleosome core particles from recombinant histones and DNA.Q34296889
Rapid periodic binding and displacement of the glucocorticoid receptor during chromatin remodelingQ34315127
A nucleotide-driven switch regulates flanking DNA length sensing by a dimeric chromatin remodelerQ35163944
SWI/SNF has intrinsic nucleosome disassembly activity that is dependent on adjacent nucleosomesQ35181133
Extranucleosomal DNA binding directs nucleosome sliding by Chd1Q35598828
Crystal structure of the chromodomain helicase DNA-binding protein 1 (Chd1) DNA-binding domain in complex with DNA.Q35604914
Identification of residues in chromodomain helicase DNA-binding protein 1 (Chd1) required for coupling ATP hydrolysis to nucleosome slidingQ35626126
Dynamic regulation of transcription factors by nucleosome remodelingQ35686044
Domain architecture of the catalytic subunit in the ISW2-nucleosome complexQ36315955
Decoupling nucleosome recognition from DNA binding dramatically alters the properties of the Chd1 chromatin remodelerQ36580964
Nucleosome remodeling and epigenetics.Q37122320
The Chd1 chromatin remodeler can sense both entry and exit sides of the nucleosomeQ37264314
The Chd1 chromatin remodeler shifts hexasomes unidirectionally.Q37580481
The role of the nucleosome acidic patch in modulating higher order chromatin structureQ38085143
Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexesQ39312199
The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA.Q40318272
Identification of multiple distinct Snf2 subfamilies with conserved structural motifs.Q41900203
Nucleosomes can invade DNA territories occupied by their neighborsQ43136918
Site-directed histone-DNA contact mapping for analysis of nucleosome dynamicsQ44760955
Spatial contacts and nucleosome step movements induced by the NURF chromatin remodeling complexQ44985666
Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly.Q45219232
The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacingQ46182787
ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factorQ46700727
Nucleosome-Chd1 structure and implications for chromatin remodellingQ47667287
The Chd1 Chromatin Remodeler Shifts Nucleosomal DNA Bidirectionally as a MonomerQ47751989
ISWI chromatin remodellers sense nucleosome modifications to determine substrate preferenceQ48000098
Chromatin remodeling through directional DNA translocation from an internal nucleosomal siteQ48947090
The Sequence of Nucleosomal DNA Modulates Sliding by the Chd1 Chromatin Remodeler.Q51141104
Interdomain Communication of the Chd1 Chromatin Remodeler across the DNA Gyres of the Nucleosome.Q51175089
The nucleosomal acidic patch relieves auto-inhibition by the ISWI remodeler SNF2h.Q52319102
Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosomeQ56530225
Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal TailQ61041700
New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioningQ74352513
Inverted factor access and slow reversion characterize SWI/SNF-altered nucleosome dimersQ79377339
Nucleosome structure and functionQ86246092
P4510describes a project that usesImageJQ1659584
P577publication date2019-05-16
P1433published ineLifeQ2000008
P1476titleAsymmetry between the two acidic patches dictates the direction of nucleosome sliding by the ISWI chromatin remodeler
P478volume8

Reverse relations

cites work (P2860)
Q91826886A basic motif anchoring ISWI to nucleosome acidic patch regulates nucleosome spacing
Q83231517Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome
Q104284947Reconstitution and Purification of Nucleosomes with Recombinant Histones and Purified DNA
Q104111409Structural insights into assembly and function of the RSC chromatin remodeling complex
Q98196834The nucleosome acidic patch and H2A ubiquitination underlie mSWI/SNF recruitment in synovial sarcoma

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