The role of the nucleosome acidic patch in modulating higher order chromatin structure

scientific article published on 27 February 2013

The role of the nucleosome acidic patch in modulating higher order chromatin structure is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1098/RSIF.2012.1022
P932PMC publication ID3627075
P698PubMed publication ID23446052
P5875ResearchGate publication ID235749575

P50authorKarolin LugerQ6373153
P2093author name stringUma M Muthurajan
Jeffrey C Hansen
Anna A Kalashnikova
Mary E Porter-Goff
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Molecular mimicry between IL-33 and KSHV for attachment to chromatin through the H2A-H2B acidic pocketQ24321867
Mitotic phosphorylation prevents the binding of HMGN proteins to chromatinQ24550896
Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatinQ24681606
Structure of RCC1 chromatin factor bound to the nucleosome core particleQ27664183
Structural Basis of Silencing: Sir3 BAH Domain in Complex with a Nucleosome at 3.0 A ResolutionQ27675642
The 1.7 A crystal structure of the regulator of chromosome condensation (RCC1) reveals a seven-bladed propellerQ27748937
Structure and function of the Saccharomyces cerevisiae Sir3 BAH domainQ27935710
SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeastQ27936734
Compensatory interactions between Sir3p and the nucleosomal LRS surface imply their direct interactionQ28756488
RCC1 uses a conformationally diverse loop region to interact with the nucleosome: a model for the RCC1-nucleosome complexQ28910442
Histone H4-K16 acetylation controls chromatin structure and protein interactionsQ29614521
The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiaeQ29614854
The asymmetric distribution of the constituents of the Ran system is essential for transport into and out of the nucleusQ29616325
Spreading of transcriptional repressor SIR3 from telomeric heterochromatinQ29618931
Regulation of chromatin structure and function by HMGN proteinsQ33638415
Regulation of DNA-dependent activities by the functional motifs of the high-mobility-group chromosomal proteinsQ33689010
HMGNs, DNA repair and cancerQ33731091
Close but distinct regions of human herpesvirus 8 latency-associated nuclear antigen 1 are responsible for nuclear targeting and binding to human mitotic chromosomesQ33851443
Efficient persistence of extrachromosomal KSHV DNA mediated by latency-associated nuclear antigenQ33859518
Ordered nucleation and spreading of silenced chromatin in Saccharomyces cerevisiae.Q33893339
Conformational dynamics of the chromatin fiber in solution: determinants, mechanisms, and functionsQ33958912
Nucleosome arrays reveal the two-start organization of the chromatin fiberQ34371762
The Kaposi's sarcoma-associated herpesvirus latency-associated nuclear antigen 1 N terminus is essential for chromosome association, DNA replication, and episome persistenceQ34553975
Two classes of sir3 mutants enhance the sir1 mutant mating defect and abolish telomeric silencing in Saccharomyces cerevisiaeQ34609671
30 nm chromatin fibre decompaction requires both H4-K16 acetylation and linker histone evictionQ34800325
Determinants of histone H4 N-terminal domain function during nucleosomal array oligomerization: roles of amino acid sequence, domain length, and charge densityQ34977877
Architecture of the high mobility group nucleosomal protein 2-nucleosome complex as revealed by methyl-based NMR.Q35134074
IL-33, the IL-1-like cytokine ligand for ST2 receptor, is a chromatin-associated nuclear factor in vivoQ35575987
Participation of core histone "tails" in the stabilization of the chromatin solenoidQ36208922
Regulation of the H4 tail binding and folding landscapes via Lys-16 acetylation.Q36397739
Chromatin architectural proteinsQ36408592
Delineation of the protein module that anchors HMGN proteins to nucleosomes in the chromatin of living cellsQ36540237
Sir3-nucleosome interactions in spreading of silent chromatin in Saccharomyces cerevisiaeQ36949887
Sir3-dependent assembly of supramolecular chromatin structures in vitroQ37106461
Spatial and temporal coordination of mitosis by Ran GTPaseQ37163028
Incorporation of chromosomal proteins HMG-14/HMG-17 into nascent nucleosomes induces an extended chromatin conformation and enhances the utilization of active transcription complexesQ37695789
Studies of the DNA binding properties of histone H4 amino terminus. Thermal denaturation studies reveal that acetylation markedly reduces the binding constant of the H4 "tail" to DNA.Q38322516
The silent information regulator 3 protein, SIR3p, binds to chromatin fibers and assembles a hypercondensed chromatin architecture in the presence of saltQ39027061
The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA.Q40318272
High-mobility-group chromosomal proteins: architectural components that facilitate chromatin function.Q41080193
Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosomeQ41307889
Domain organization and quaternary structure of the Saccharomyces cerevisiae silent information regulator 3 protein, Sir3pQ42035090
The effects of histone H4 tail acetylations on cation-induced chromatin folding and self-association.Q42701117
Structure of the Sir3 protein bromo adjacent homology (BAH) domain from S. cerevisiae at 1.95 A resolutionQ43043642
Energy landscape analyses of disordered histone tails reveal special organization of their conformational dynamicsQ45779631
Structure and binding of the H4 histone tail and the effects of lysine 16 acetylation.Q46223069
Cyclic Adenosine 3′, 5′-Monophosphate-Dependent Phosphorylation of HMG 14 Inhibits Its Interactions with NucleosomesQ46502641
The RanGTP gradient - a GPS for the mitotic spindleQ46603162
Stimulation of replication efficiency of a chromatin template by chromosomal protein HMG-17.Q48940687
Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal TailQ61041700
Reversible oligonucleosome self-association: dependence on divalent cations and core histone tail domainsQ71165591
Core Histone Tail Domains Mediate Oligonucleosome Folding and Nucleosomal DNA Organization through Distinct Molecular MechanismsQ71823623
Hybrid trypsinized nucleosomal arrays: identification of multiple functional roles of the H2A/H2B and H3/H4 N-termini in chromatin fiber compactionQ73701975
The core histone N-terminal tail domains function independently and additively during salt-dependent oligomerization of nucleosomal arraysQ80404711
H2A.Z alters the nucleosome surface to promote HP1alpha-mediated chromatin fiber foldingQ81013899
P433issue82
P304page(s)20121022
P577publication date2013-02-27
P1433published inJournal of the Royal Society InterfaceQ2492390
P1476titleThe role of the nucleosome acidic patch in modulating higher order chromatin structure
P478volume10

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