review article | Q7318358 |
scholarly article | Q13442814 |
P2093 | author name string | T Kogoma | |
P2860 | cites work | RecBCD enzyme is altered upon cutting DNA at a chi recombination hotspot | Q24561435 |
The recombination hot spot chi activates RecBCD recombination by converting Escherichia coli to a recD mutant phenocopy | Q24563863 | ||
Adaptive mutation: the uses of adversity | Q24596056 | ||
Autodigestion of lexA and phage lambda repressors | Q24597460 | ||
recD: the gene for an essential third subunit of exonuclease V | Q24630457 | ||
Biochemistry of homologous recombination in Escherichia coli | Q24634614 | ||
Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes | Q24635818 | ||
DMC1: a meiosis-specific yeast homolog of E. coli recA required for recombination, synaptonemal complex formation, and cell cycle progression | Q27933115 | ||
The repair of double-strand breaks in DNA; a model involving recombination | Q28256950 | ||
The double-strand-break repair model for recombination | Q28267259 | ||
Mapping and sequencing of mutations in the Escherichia colirpoB gene that lead to rifampicin resistance | Q29395941 | ||
Crystal structure at 3.5 A resolution of HIV-1 reverse transcriptase complexed with an inhibitor | Q29547710 | ||
Genetic separation of Escherichia coli recA functions for SOS mutagenesis and repressor cleavage. | Q30380797 | ||
RecA-mediated cleavage activates UmuD for mutagenesis: mechanistic relationship between transcriptional derepression and posttranslational activation | Q33559704 | ||
Adaptive mutation sequences reproduced by mismatch repair deficiency | Q33640315 | ||
DNA polymerase II is encoded by the DNA damage-inducible dinA gene of Escherichia coli | Q33825068 | ||
Identification and purification of a single-stranded-DNA-specific exonuclease encoded by the recJ gene of Escherichia coli | Q33849909 | ||
UV-induced alleviation of K-specific restriction of bacteriophage lambda | Q37503901 | ||
Footprinting analysis of mammalian RNA polymerase II along its transcript: an alternative view of transcription elongation | Q37511357 | ||
Ribonucleases H of retroviral and cellular origin | Q37563457 | ||
Involvement of the activated form of RecA protein in SOS mutagenesis and stable DNA replication in Escherichia coli | Q37579186 | ||
Absence of RNase H allows replication of pBR322 in Escherichia coli mutants lacking DNA polymerase I | Q37580451 | ||
A new class of Escherichia coli recBC mutants: implications for the role of RecBC enzyme in homologous recombination | Q37580459 | ||
Mechanism of ultraviolet-induced mutagenesis: Extent and fidelity of in vitro DNA synthesis on irradiated templates | Q37589566 | ||
Conjugational recombination in E. coli: myths and mechanisms | Q37623662 | ||
Escherichia coli PriA protein is essential for inducible and constitutive stable DNA replication | Q37638403 | ||
Escherichia coli RecG and RecA proteins in R-loop formation. | Q37697599 | ||
Mutation induced by DNA damage: a many protein affair | Q37892175 | ||
Ribonuclease H: from discovery to 3D structure | Q37903282 | ||
Branch migration of Holliday junctions: identification of RecG protein as a junction specific DNA helicase | Q38302894 | ||
A mutation in helicase motif III of E. coli RecG protein abolishes branch migration of Holliday junctions | Q38311217 | ||
Homologous pairing in vitro stimulated by the recombination Hotspot, Chi | Q38334215 | ||
Interactions between RuvA and RuvC at Holliday junctions: inhibition of junction cleavage and formation of a RuvA-RuvC-DNA complex. | Q38350438 | ||
DNA synthesis inhibition and the induction of protein X in Escherichia coli | Q39376375 | ||
DNA double-chain breaks in recombination of phage lambda and of yeast | Q39489899 | ||
Selective inhibition of in vitro DNA synthesis dependent on phiX174 compared with fd DNA. I. Protein requirements for selective inhibition | Q39811802 | ||
The RuvABC proteins and Holliday junction processing in Escherichia coli | Q39840417 | ||
Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12. | Q39843576 | ||
Orientation-dependent recombination hotspot activity in bacteriophage λ | Q39902694 | ||
Evidence that recBC-dependent degradation of duplex DNA in Escherichia coli recD mutants involves DNA unwinding | Q39935833 | ||
Inhibition of the recBCD-dependent activation of Chi recombinational hot spots in SOS-induced cells of Escherichia coli | Q39935949 | ||
Requirement of the Escherichia coli dnaA gene function for ori-2-dependent mini-F plasmid replication | Q39956426 | ||
RecA protein acts at the initiation of stable DNA replication in rnh mutants of Escherichia coli K-12. | Q39980927 | ||
Conditional Lethality of recA and recB Derivatives of a Strain of Escherichia coli K-12 with a Temperature-Sensitive Deoxyribonucleic Acid Polymerase I | Q40098137 | ||
Replication of animal mitochondrial DNA. | Q40103664 | ||
Does transcription by RNA polymerase play a direct role in the initiation of replication? | Q40394500 | ||
Collapse and repair of replication forks in Escherichia coli | Q40416038 | ||
Molecular mechanisms of Holliday junction processing in Escherichia coli. | Q40454068 | ||
Instability of inhibited replication forks in E. coli. | Q40475161 | ||
Multiple initiation mechanisms adapt phage T4 DNA replication to physiological changes during T4's development | Q40479098 | ||
Discriminatory function of ribonuclease H in the selective initiation of plasmid DNA replication | Q40492742 | ||
Old phage, new insights: two recently recognized mechanisms of transcriptional regulation in bacteriophage T4 development | Q40521989 | ||
RNA-DNA hybridization promoted by E. coli RecA protein | Q40533798 | ||
RecA protein promotes rapid RNA-DNA hybridization in heterogeneous RNA mixtures | Q40533804 | ||
DNA repair comes of age. | Q40609470 | ||
Chi and the RecBC D enzyme of Escherichia coli | Q40614043 | ||
Mechanisms of transcription-repair coupling and mutation frequency decline | Q40693785 | ||
The initiator protein DnaA: evolution, properties and function | Q40716275 | ||
Reaching for the ring: the study of mitochondrial genome structure | Q40786608 | ||
Chi sites in combination with RecA protein increase the survival of linear DNA in Escherichia coli by inactivating exoV activity of RecBCD nuclease | Q40792215 | ||
Repair of DNA double-strand breaks in Escherichia coli, which requires recA function and the presence of a duplicate genome | Q40840136 | ||
Survival of hunger and stress: the role of rpoS in early stationary phase gene regulation in E. coli | Q40871460 | ||
Dissociation of synthetic Holliday junctions by E. coli RecG protein. | Q40871651 | ||
A novel Escherichia coli mutant capable of DNA replication in the absence of protein synthesis | Q40901690 | ||
A cold sensitive dnaA mutant of E. coli which overinitiates chromosome replication at low temperature | Q40913729 | ||
Menage à trois: double strand break repair, V(D)J recombination and DNA-PK. | Q40925823 | ||
Homologous recombination and the roles of double-strand breaks | Q40930013 | ||
Cloning of replication origins from the E. coli K12 chromosome | Q40936760 | ||
ATP-dependent resolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase | Q33885962 | ||
The origin of replication, oriC, and the dnaA protein are dispensable in stable DNA replication (sdrA) mutants of Escherichia coli K-12. | Q33933466 | ||
DNA damage-inducible origins of DNA replication in Escherichia coli | Q33938542 | ||
Double-stranded gap repair of DNA by gene conversion in Escherichia coli | Q33954364 | ||
Further tests of a recombination model in which chi removes the RecD subunit from the RecBCD enzyme of Escherichia coli | Q33957092 | ||
Adaptive reversion of a frameshift mutation in Escherichia coli | Q33958142 | ||
Roles of ruvA, ruvC and recG gene functions in normal and DNA damage-inducible replication of the Escherichia coli chromosome | Q33963364 | ||
DNA synthesis errors associated with double-strand-break repair | Q33965497 | ||
Two enzymes, both of which process recombination intermediates, have opposite effects on adaptive mutation in Escherichia coli. | Q33966542 | ||
Opposing roles of the holliday junction processing systems of Escherichia coli in recombination-dependent adaptive mutation | Q33966750 | ||
Differential suppression of priA2::kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA, and dnaC | Q33967442 | ||
Repair of double-strand breaks in bacteriophage T4 by a mechanism that involves extensive DNA replication | Q33968071 | ||
Proofreading-defective DNA polymerase II increases adaptive mutation in Escherichia coli. | Q34019746 | ||
Homologous recombination-dependent initiation of DNA replication from DNA damage-inducible origins in Escherichia coli | Q34057928 | ||
DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine | Q34058015 | ||
The Escherichia coli polB gene, which encodes DNA polymerase II, is regulated by the SOS system | Q34144983 | ||
DNA synthesis dependent on genetic recombination: characterization of a reaction catalyzed by purified bacteriophage T4 proteins | Q34162674 | ||
RecBC enzyme nicking at Chi sites during DNA unwinding: location and orientation-dependence of the cutting | Q34193611 | ||
DNA Sequence and Analysis of 136 Kilobases of the Escherichia coli Genome: Organizational Symmetry around the Origin of Replication | Q34306353 | ||
Thymine starvation-induced structural changes in Escherichia coli DNA. Detection by pulsed field gel electrophoresis and evidence for involvement of homologous recombination | Q34326137 | ||
DNA replication triggered by double-stranded breaks in E. coli: dependence on homologous recombination functions | Q34336035 | ||
Hypernegative supercoiling of the DNA template during transcription elongation in vitro. | Q34348708 | ||
Recovery from ultraviolet light-induced inhibition of DNA synthesis requires umuDC gene products in recA718 mutant strains but not in recA+ strains of Escherichia coli | Q34349964 | ||
The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme | Q34355622 | ||
Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I | Q34451557 | ||
In vivo evidence for the involvement of anionic phospholipids in initiation of DNA replication in Escherichia coli | Q34731920 | ||
DNA sequences at immunoglobulin switch region recombination sites | Q34963864 | ||
Repair of DNA double-strand breaks in Escherichia coli cells requires synthesis of proteins that can be induced by UV light | Q35375254 | ||
Movement and site selection for priming by the primosome in phage phi X174 DNA replication | Q35413339 | ||
Purification of ribonuclease H as a factor required for initiation of in vitro Co1E1 DNA replication | Q35531732 | ||
Homologous pairing of single-stranded DNA and superhelical double-stranded DNA catalyzed by RecO protein from Escherichia coli | Q35578243 | ||
Cloning of the Escherichia coli gene for primosomal protein i: the relationship to dnaT, essential for chromosomal DNA replication | Q35592174 | ||
The DNA replication priming protein, PriA, is required for homologous recombination and double-strand break repair | Q35603171 | ||
Host participation in plasmid maintenance: dependence upon dnaA of replicons derived from P1 and F | Q35611641 | ||
Mutations, duplication, and deletion of recombined switch regions suggest a role for DNA replication in the immunoglobulin heavy-chain switch | Q36776415 | ||
Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho | Q36841147 | ||
The DnaA box R4 in the minimaloriCis dispensable for initiation ofEscherichia colichromosome replication | Q36890885 | ||
Recombination-dependent concatemeric plasmid replication | Q36930470 | ||
Homologous recombination in procaryotes. | Q37054728 | ||
Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coli | Q37060983 | ||
Fidelity mechanisms in DNA replication | Q37285267 | ||
Purified Escherichia coli recA protein catalyzes homologous pairing of superhelical DNA and single-stranded fragments | Q37326507 | ||
Initiation of general recombination catalyzed in vitro by the recA protein of Escherichia coli | Q37332515 | ||
Chi sequence protects against RecBCD degradation of DNA in vivo | Q37349738 | ||
Computer analysis of retroviral pol genes: assignment of enzymatic functions to specific sequences and homologies with nonviral enzymes | Q37402708 | ||
Replication deficiencies in priA mutants of Escherichia coli lacking the primosomal replication n' protein | Q37473720 | ||
Double-strand break repair in the absence of RAD51 in yeast: a possible role for break-induced DNA replication | Q37490114 | ||
Escherichia coli XerC recombinase is required for chromosomal segregation at cell division. | Q54693462 | ||
Nature of the SOS-inducing signal in Escherichia coli. The involvement of DNA replication. | Q54716069 | ||
Recombination of bacteriophage lambda in recD mutants of Escherichia coli. | Q54736666 | ||
Apparent gene conversion in an Escherichia coli rec+ strain is explained by multiple rounds of reciprocal crossing-over. | Q54748030 | ||
Integrative suppression of dnaA(Ts) mutations mediated by plasmid F in Escherichia coli is a DnaA-dependent process. | Q54758591 | ||
Effects of modulation of RNase H production on the recovery of DNA synthesis following UV-irradiation in Escherichia coli. | Q54760952 | ||
Meiosis-induced double-strand break sites determined by yeast chromatin structure | Q58486296 | ||
recA-independent general genetic recombination of plasmids | Q59065794 | ||
Double-strand breaks at an initiation site for meiotic gene conversion | Q59068287 | ||
Intron mobility in phage T4 occurs in the context of recombination-dependent DNA replication by way of multiple pathways | Q64389435 | ||
Quantitation of the involvement of the recA, recB, recC, recF, recJ, recN, lexA, radA, radB, uvrD, and umuC genes in the repair of X-ray-induced DNA double-strand breaks in Escherichia coli | Q64390411 | ||
Double-strand scission of DNA involved in thymineless death of Escherichia coli 15 TAU | Q64390846 | ||
Characterization of the replication of Escherichia coli DNA in the absence of protein synthesis: Stable DNA replication | Q66896811 | ||
The dnaA gene product is not required during stable chromosome replication in Escherichia coli | Q67269746 | ||
Rec-mediated recombinational activity of two adjacent Chi elements in bacteriophage lambda | Q67288470 | ||
Stability and Properties of Double and Triple Helices: Dramatic Effects of RNA or DNA Backbone Composition | Q67464150 | ||
Two types of temperature sensitivity in DNA replication of an Escherichia coli dnaB mutant | Q67488224 | ||
Inducible stable DNA replication in Escherichia coli uvr+ and uvr- cells, treated with genotoxic chemicals | Q67532245 | ||
A mechanism of formation of a persistent hybrid between elongating RNA and template DNA | Q67664935 | ||
Studies on the Inducible Inhibitor of Radiation-Induced DNA Degradation of Escherichia coli | Q69284084 | ||
Genetic analysis of constitutive stable DNA replication in rnh mutants of Escherichia coli K12 | Q69810149 | ||
Discontinuities in the DNA synthesized in an Excision-defective strain of Escherichia coli following ultraviolet irradiation | Q69833258 | ||
Initiation of lagging-strand synthesis for pBR322 plasmid DNA replication in vitro is dependent on primosomal protein i encoded by dnaT | Q69838760 | ||
Mechanism of transient inhibition of DNA synthesis in ultraviolet-irradiated E. coli: inhibition is independent of recA whilst recovery requires RecA protein itself and an additional, inducible SOS function | Q69893640 | ||
n' Protein activator sites of plasmid pBR322 are not essential for its DNA replication | Q70154494 | ||
Reduced transcription of the rnh gene in Escherichia coli mutants expressing the SOS regulon constitutively | Q70176547 | ||
oriX: a new replication origin in E. coli | Q70183896 | ||
Multiple origin usage for DNA replication in sdrA(rnh) mutants of Escherichia coli K-12. Initiation in the absence of oriC | Q70390149 | ||
Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis | Q70918189 | ||
Suppressor mutations (rin) that specifically suppress the recA+ dependence of stable DNA replication in Escherichia coliK-12 | Q71464922 | ||
Activation of stable DNA replication in rapidly growing Escherichia coli at the time of entry to stationary phase | Q71713399 | ||
RNase H-defective mutants of Escherichia coli: a possible discriminatory role of RNase H in initiation of DNA replication | Q72398741 | ||
dnaA suppressor (dasF) mutants of Escherichia coli are stable DNA replication (sdrA/rnh) mutants | Q72398795 | ||
Genetic control of damage-inducible restriction alleviation in Escherichia coli K12: an SOS function not repressed by lexA | Q72409402 | ||
Continuous synthesis of the dnaA gene product of Escherichia coli in the cell cycle | Q72945444 | ||
MECHANISM OF RNA POLYMERASE ACTION: FORMATION OF DNA-RNA HYBRIDS WITH SINGLE-STRANDED TEMPLATES | Q76742714 | ||
INDUCTION OF REPLICATION BY THYMINE STARVATION AT THE CHROMOSOME ORIGIN IN ESCHERICHIA COLI | Q76936164 | ||
Thymine deficiency and the normal DNA replication cycle. I | Q79064176 | ||
Recombination by replication | Q40996441 | ||
Molecular handles on adaptive mutation | Q41034482 | ||
Origin of Replication, oriC, of the Escherichia coli K12 Chromosome: Genetic Mapping and Minichromosome Replication | Q41094802 | ||
recA-Dependent DNA Replication in the Absence of Protein Synthesis: Characteristics of a Dominant Lethal Replication Mutation, dnaT, and Requirement for recA+ Function | Q41094857 | ||
Initiation of V(D)J recombinations in a cell-free system by RAG1 and RAG2 proteins. | Q41096610 | ||
Processing the holliday junction in homologous recombination | Q41178364 | ||
Induction of UV-resistant DNA replication in Escherichia coli: Induced stable DNA replication as an SOS function | Q41180656 | ||
Size and Structure of Replicating Mitochondrial DNA in Cultured Tobacco Cells | Q41218627 | ||
Adaptive reversion of a frameshift mutation in Escherichia coli by simple base deletions in homopolymeric runs | Q41572901 | ||
Function of ribonuclease H in initiation of DNA replication in Escherichia coli K-12. | Q41866211 | ||
Effect on DNA topology by DnaA protein, the initiation factor of chromosomal DNA replication in Escherichia coli | Q41930143 | ||
The mechanism of recA polA lethality: suppression by RecA-independent recombination repair activated by the lexA(Def) mutation in Escherichia coli | Q42965480 | ||
Roles of DNA topoisomerases in the regulation of R-loop formation in vitro | Q43485153 | ||
Transcriptional activation of pBR322 DNA can lead to duplex DNA unwinding catalyzed by the Escherichia coli preprimosome. | Q43505873 | ||
Rec-mediated recombinational hot spot activity in bacteriophage lambda. III. Chi mutations are site-mutations stimulating rec-mediated recombination | Q43933897 | ||
Concatemer formation of ColE1-type plasmids in mutants of Escherichia coli lacking RNase H activity | Q44101314 | ||
Activation of recA protein. The open helix model for LexA cleavage | Q44689911 | ||
Attachment of nascent RNA molecules to superhelical DNA | Q45140620 | ||
Purification and characterization of bacteriophage T4 gene 59 protein. A DNA helicase assembly protein involved in DNA replication. | Q46080119 | ||
The mutant DnaAcos protein which overinitiates replication of the Escherichia coli chromosome is inert to negative regulation for initiation | Q46182018 | ||
DnaA protein is sensitive to a soluble factor and is specifically inactivated for initiation of in vitro replication of the Escherichia coli minichromosome. | Q46611669 | ||
Operon structure of dnaT and dnaC genes essential for normal and stable DNA replication of Escherichia coli chromosome | Q46750150 | ||
Sequential early stages in the in vitro initiation of replication at the origin of the Escherichia coli chromosome | Q46911724 | ||
Induction of chromosome re-initiations in a thermosensitive DNA mutant of Escherichiacoli | Q47763712 | ||
DNA replication in Escherichia coli: Replication in absence of protein synthesis after replication inhibition | Q47763722 | ||
Changes of Membrane Proteins and Their Relation to Deoxyribonucleic Acid Synthesis and Cell Division of Escherichia coli | Q47767106 | ||
dif, a recA-independent recombination site in the terminus region of the chromosome of Escherichia coli | Q48217431 | ||
Inviability of recA- derivatives of the DNA polymerase mutant of De Lucia and Cairns. | Q53965970 | ||
Stimulation of nuclease activity by thymine starvation | Q54344341 | ||
Effects of rifampicin resistant rpoB mutations on antitermination and interaction with nusA in Escherichia coli. | Q54373152 | ||
Evidence for the direct involvement of RNA in the initiation of DNA replication in Escherichia coli 15T− | Q54392394 | ||
Growth-medium-dependent repair of DNA single-strand and double-strand breaks in X-irradiated Escherichia coli. | Q54443508 | ||
Initiation of DNA replication in Escherichia coli: RNase H-deficient mutants do not require the dnaA function | Q54485264 | ||
Repair of DNA double-strand breaks in Escherichia coli K12 requires a functional recN product | Q54485834 | ||
Integration of donor DNA in bacterial conjugation | Q54531196 | ||
The RecG branch migration protein of Escherichia coli dissociates R-loops. | Q54575363 | ||
Inducible stable DNA replication of Escherichia coli tolerates unexcised pyrimidine dimers in an uvr-dependent manner. | Q54621641 | ||
RecA, Tus protein and constitutive stable DNA replication in Escherichia coli rnhA mutants. | Q54627661 | ||
Adaptive mutation by deletions in small mononucleotide repeats. | Q54630365 | ||
Structural requirements of substrate DNA for binding to and cleavage by RuvC, a Holliday junction resolvase. | Q54633147 | ||
Recombination in adaptive mutation. | Q54635736 | ||
Substrate specificity of the Escherichia coli RuvC protein. Resolution of three- and four-stranded recombination intermediates. | Q54640001 | ||
DNA damage-inducible replication of the Escherichia coli chromosome is initiated at separable sites within the minimal oriC. | Q54640687 | ||
Two related recombinases are required for site-specific recombination at dif and cer in E. coli K12. | Q54649603 | ||
Reverse branch migration of Holliday junctions by RecG protein: a new mechanism for resolution of intermediates in recombination and DNA repair. | Q54649605 | ||
Requirement of homologous recombination functions for viability of the Escherichia coli cell that lacks RNase HI and exonuclease V activities. | Q54664457 | ||
ATPase-deficient mutants of the Escherichia coli DNA replication protein PriA are capable of catalyzing the assembly of active primosomes | Q54680730 | ||
Mammalian DNA polymerase beta can substitute for DNA polymerase I during DNA replication in Escherichia coli | Q54684426 | ||
Growth phase-dependent modification of RNA polymerase in Escherichia coli | Q54689764 | ||
DNA polymerase I in constitutive stable DNA replication in Escherichia coli | Q35621299 | ||
Recombination associated with replication of malarial mitochondrial DNA | Q35844667 | ||
Identification and characterization of the Escherichia coli RecT protein, a protein encoded by the recE region that promotes renaturation of homologous single-stranded DNA | Q35965992 | ||
Genetic analysis of double-strand break repair in Escherichia coli | Q36104167 | ||
Escherichia coli RNA polymerase mutants that enhance or diminish the SOS response constitutively expressed in the absence of RNase HI activity | Q36105787 | ||
D-loops and R-loops: alternative mechanisms for the initiation of chromosome replication in Escherichia coli | Q36106189 | ||
Absence of a direct role for RNase HI in initiation of DNA replication at the oriC site on the Escherichia coli chromosome | Q36123190 | ||
Requirement for the polymerization and 5'-->3' exonuclease activities of DNA polymerase I in initiation of DNA replication at oriK sites in the absence of RecA in Escherichia coli rnhA mutants | Q36123822 | ||
Levels of epsilon, an essential replication subunit of Escherichia coli DNA polymerase III, are controlled by heat shock proteins | Q36135582 | ||
DNA polymerase I modulates inducible stable DNA replication in Escherichia coli | Q36140687 | ||
Is RecF a DNA replication protein? | Q36152798 | ||
Requirement of RecBC enzyme and an elevated level of activated RecA for induced stable DNA replication in Escherichia coli | Q36159839 | ||
Molecular organization and nucleotide sequence of the recG locus of Escherichia coli K-12. | Q36164197 | ||
RecA protein of Escherichia coli has a third essential role in SOS mutator activity | Q36164939 | ||
Constitutive expression of the SOS response in recA718 mutants of Escherichia coli requires amplification of RecA718 protein | Q36228865 | ||
Mode of initiation of constitutive stable DNA replication in RNase H-defective mutants of Escherichia coli K-12. | Q36238573 | ||
RNase H confers specificity in the dnaA-dependent initiation of replication at the unique origin of the Escherichia coli chromosome in vivo and in vitro | Q36248894 | ||
Requirement of the Escherichia coli dnaA gene product for plasmid F maintenance | Q36259197 | ||
RNase H is not involved in the induction of stable DNA replication in Escherichia coli | Q36281205 | ||
RNase H-defective mutants of Escherichia coli | Q36284480 | ||
Direct evidence for specific binding of the replicative origin of the Escherichia coli chromosome to the membrane | Q36299273 | ||
Method for determining whether a gene of Escherichia coli is essential: application to the polA gene | Q36300382 | ||
Genetic analysis of mutations that compensate for loss of Escherichia coli DNA topoisomerase I | Q36305789 | ||
Mechanisms for recF-dependent and recB-dependent pathways of postreplication repair in UV-irradiated Escherichia coli uvrB | Q36333409 | ||
dnaT, dominant conditional-lethal mutation affecting DNA replication in Escherichia coli | Q36342336 | ||
Evidence for RecA protein association with the cell membrane and for changes in the levels of major outer membrane proteins in SOS-induced Escherichia coli cells | Q36365196 | ||
Chi activity during transduction-associated recombination | Q36379670 | ||
Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H | Q36386816 | ||
Cleavage of the Escherichia coli lexA protein by the recA protease | Q36392308 | ||
Targeting of the UmuD, UmuD', and MucA' mutagenesis proteins to DNA by RecA protein | Q36514563 | ||
Colibri: a functional data base for the Escherichia coli genome | Q36756440 | ||
Enzymatic production of deoxyribonucleic acid double-strand breaks after ultraviolet irradiation of Escherichia coli K-12 | Q36762196 | ||
The leucine-Lrp regulon in E. coli: A global response in search of a raison d'Être | Q36776311 | ||
P433 | issue | 2 | |
P304 | page(s) | 212-238 | |
P577 | publication date | 1997-06-01 | |
P1433 | published in | Microbiology and Molecular Biology Reviews | Q6839270 |
P1476 | title | Stable DNA replication: interplay between DNA replication, homologous recombination, and transcription | |
P478 | volume | 61 |
Q39869214 | 25 years on and no end in sight: a perspective on the role of RecG protein |
Q47863125 | A Strategy for Creating Organisms Dependent on Noncanonical Amino Acids. |
Q64387298 | A new role for Escherichia coli Dam DNA methylase in prevention of aberrant chromosomal replication |
Q90173081 | A novel mode of DnaA-DnaA interaction promotes ADP dissociation for reactivation of replication initiation activity |
Q40637256 | A novel nuclease-ATPase (Nar71) from archaea is part of a proposed thermophilic DNA repair system |
Q40442468 | A novel pairing process promoted by Escherichia coli RecA protein: inverse DNA and RNA strand exchange |
Q90452461 | A role for 3' exonucleases at the final stages of chromosome duplication in Escherichia coli |
Q34603945 | A species barrier between bacteriophages T2 and T4: exclusion, join-copy and join-cut-copy recombination and mutagenesis in the dCTPase genes |
Q27931070 | A yeast gene, MGS1, encoding a DNA-dependent AAA(+) ATPase is required to maintain genome stability. |
Q42258104 | Accelerated growth in the absence of DNA replication origins |
Q24800650 | Accumulation of large non-circular forms of the chromosome in recombination-defective mutants of Escherichia coli |
Q34088211 | Adaptive mutation in Escherichia coli |
Q34603905 | Adaptive mutation: has the unicorn landed? |
Q24623723 | Adaptive mutation: implications for evolution |
Q24809640 | Allele specific synthetic lethality between priC and dnaAts alleles at the permissive temperature of 30 degrees C in E. coli K-12 |
Q38622583 | An Overview of the Molecular Mechanisms of Recombinational DNA Repair |
Q57285972 | An organellar thymidine kinase is required for the efficient replication of the maize plastidial genome |
Q36667392 | Antibiotic resistance acquired through a DNA damage-inducible response in Acinetobacter baumannii |
Q90629593 | Atomic force microscopy-based characterization of the interaction of PriA helicase with stalled DNA replication forks |
Q42032142 | Avoiding chromosome pathology when replication forks collide |
Q55315209 | Bacterial RecA Protein Promotes Adenoviral Recombination during In Vitro Infection. |
Q92976778 | Bacterial ribonucleases and their roles in RNA metabolism |
Q22061798 | Bacteriophage T4 Genome |
Q34311664 | Bacteriophage T4 gene 41 helicase and gene 59 helicase-loading protein: a versatile couple with roles in replication and recombination |
Q92478635 | Blocking the Trigger: Inhibition of the Initiation of Bacterial Chromosome Replication as an Antimicrobial Strategy |
Q64389590 | Break-Induced Replication: The Where, The Why, and The How |
Q34037586 | Break-induced DNA replication |
Q42039020 | Break-induced replication and genome stability. |
Q27933666 | Break-induced replication: a review and an example in budding yeast |
Q37168320 | Characterization of the ATPase activity of RecG and RuvAB proteins on model fork structures reveals insight into stalled DNA replication fork repair |
Q28078118 | Chromosomal Replication Complexity: A Novel DNA Metrics and Genome Instability Factor |
Q57753081 | Chromosomal over-replication in Escherichia coli recG cells is triggered by replication fork fusion and amplified if replichore symmetry is disturbed |
Q34295716 | Chromosome Replication in Escherichia coli: Life on the Scales. |
Q41300410 | Cleavage of a model DNA replication fork by a Type I restriction endonuclease. |
Q22004015 | Cloning of the cDNA encoding the large subunit of human RNase HI, a homologue of the prokaryotic RNase HII |
Q36535569 | Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell |
Q34723611 | Cooperation of RAD51 and RAD54 in regression of a model replication fork |
Q27936060 | Coordination of the initiation of recombination and the reductional division in meiosis in Saccharomyces cerevisiae |
Q34983899 | Cyclic peptide inhibitors of the β-sliding clamp in Staphylococcus aureus |
Q56360950 | DNA Topoisomerase I differentially modulates R-loops across the human genome |
Q92375637 | DNA double strand break repair in Escherichia coli perturbs cell division and chromosome dynamics |
Q34020119 | DNA-dependent protein kinase suppresses double-strand break-induced and spontaneous homologous recombination |
Q36836996 | Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae |
Q40738040 | Depletion of RNase HI activity in Escherichia coli lacking DNA topoisomerase I leads to defects in DNA supercoiling and segregation. |
Q35880926 | Determination of the core of a minimal bacterial gene set |
Q42576825 | DiaA dynamics are coupled with changes in initial origin complexes leading to helicase loading. |
Q34297167 | Differentiation of the DnaA-oriC subcomplex for DNA unwinding in a replication initiation complex. |
Q64386994 | DksA and DNA double-strand break repair |
Q64062960 | DksA-RNA polymerase interactions support new origin formation and DNA repair in Escherichia coli |
Q30583666 | DnaA binding locus datA promotes DnaA-ATP hydrolysis to enable cell cycle-coordinated replication initiation |
Q38673352 | DnaA protein DNA-binding domain binds to Hda protein to promote inter-AAA+ domain interaction involved in regulatory inactivation of DnaA. |
Q35208627 | Double-strand-break repair recombination in Escherichia coli: physical evidence for a DNA replication mechanism in vivo |
Q33187116 | Dynamic covalent chemistry on self-templating peptides: formation of a disulfide-linked beta-hairpin mimic |
Q89926099 | Emerging roles for R-loop structures in the management of topological stress |
Q35539851 | End of the beginning: elongation and termination features of alternative modes of chromosomal replication initiation in bacteria |
Q37585041 | Enlightenment of yeast mitochondrial homoplasmy: diversified roles of gene conversion |
Q35754741 | Evidence for Retromutagenesis as a Mechanism for Adaptive Mutation in Escherichia coli |
Q33901410 | Evolution in an oncogenic bacterial species with extreme genome plasticity: Helicobacter pylori East Asian genomes |
Q36456226 | Evolution of microbial diversity during prolonged starvation |
Q30884193 | Evolutionary convergence and nitrogen metabolism in Blattabacterium strain Bge, primary endosymbiont of the cockroach Blattella germanica |
Q51730454 | Expression of RecA and cell-penetrating peptide (CPP) fusion protein in bacteria and in mammalian cells. |
Q42147256 | Fate of mat1 DNA strands during mating-type switching in fission yeast |
Q34668586 | Fission yeast switches mating type by a replication-recombination coupled process |
Q33899465 | Functional interaction between the Werner Syndrome protein and DNA polymerase delta |
Q33967556 | Genetic requirements for RAD51- and RAD54-independent break-induced replication repair of a chromosomal double-strand break |
Q44430901 | Genome Replication in Thermococcus kodakarensis Independent of Cdc6 and an Origin of Replication |
Q40945987 | Genome-wide mapping reveals single-origin chromosome replication in Leishmania, a eukaryotic microbe. |
Q43154603 | Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis. |
Q34085669 | Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli |
Q24631768 | Historical overview: searching for replication help in all of the rec places |
Q34311675 | Homologous DNA recombination in vertebrate cells |
Q35008336 | Homologous and non-homologous recombination differentially affect DNA damage repair in mice |
Q51547859 | How did metabolism and genetic replication get married? |
Q26999878 | I came to a fork in the DNA and there was RecG |
Q47888504 | Identification of temperature-sensitive dnaD mutants of Staphylococcus aureus that are defective in chromosomal DNA replication |
Q34271071 | Impairment of lagging strand synthesis triggers the formation of a RuvABC substrate at replication forks |
Q41062317 | Initiation of heat-induced replication requires DnaA and the L-13-mer of oriC |
Q35860818 | Interaction with Single-stranded DNA-binding Protein Stimulates Escherichia coli Ribonuclease HI Enzymatic Activity |
Q39798255 | Interplay between type 1A topoisomerases and gyrase in chromosome segregation in Escherichia coli. |
Q39618653 | Involvement of RAD9-dependent damage checkpoint control in arrest of cell cycle, induction of cell death, and chromosome instability caused by defects in origin recognition complex in Saccharomyces cerevisiae |
Q40211080 | Isolation of SOS constitutive mutants of Escherichia coli |
Q89899831 | Laboratory Evolution Experiments Help Identify a Predominant Region of Constitutive Stable DNA Replication Initiation |
Q40684824 | Lambda gpP-DnaB Helicase Sequestration and gpP-RpoB Associated Effects: On Screens for Auxotrophs, Selection for Rif(R), Toxicity, Mutagenicity, Plasmid Curing. |
Q33885431 | Links between replication, recombination and genome instability in eukaryotes |
Q37696954 | Maintaining genome stability at the replication fork |
Q52729392 | Maintenance of genome stability: the unifying role of interconnections between the DNA damage response and RNA-processing pathways. |
Q35636113 | Mechanisms of Theta Plasmid Replication. |
Q47334226 | Mechanisms of bacterial DNA replication restart. |
Q33692291 | Mechanisms of mutation in nondividing cells. Insights from the study of adaptive mutation in Escherichia coli |
Q34311682 | Meiotic recombination and chromosome segregation in Schizosaccharomyces pombe |
Q41340163 | Modes of overinitiation, dnaA gene expression, and inhibition of cell division in a novel cold-sensitive hda mutant of Escherichia coli |
Q39693158 | Modulation of DNA repair by mutations flanking the DNA channel through RNA polymerase |
Q24548535 | Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae |
Q35870700 | Multiple pathways process stalled replication forks |
Q27934618 | Mutations in DNA replication genes reduce yeast life span |
Q38993930 | Nascent Connections: R-Loops and Chromatin Patterning |
Q46933685 | New approaches to the problem of generating coherent, reproducible phenotypes |
Q39109316 | Non-Canonical Replication Initiation: You're Fired! |
Q34175610 | On the viability of Escherichia coli cells lacking DNA topoisomerase I |
Q24555124 | Overexpression of human RAD51 and RAD52 reduces double-strand break-induced homologous recombination in mammalian cells |
Q47558874 | Oxygen and RNA in stress-induced mutation. |
Q41859747 | Pathological replication in cells lacking RecG DNA translocase |
Q24798568 | Phage annealing proteins promote oligonucleotide-directed mutagenesis in Escherichia coli and mouse ES cells |
Q34030676 | Preferential cleavage of plasmid-based R-loops and D-loops by Drosophila topoisomerase IIIbeta |
Q40587137 | Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase |
Q42995678 | Purification and characterization of a novel human acidic nuclease/intra-cyclobutyl-pyrimidine-dimer-DNA phosphodiesterase |
Q36008202 | Quantitative genomic analysis of RecA protein binding during DNA double-strand break repair reveals RecBCD action in vivo |
Q38586926 | R loops: new modulators of genome dynamics and function |
Q39647468 | R-loop-dependent rolling-circle replication and a new model for DNA concatemer resolution by mitochondrial plasmid mp1. |
Q40009006 | R-loops and initiation of DNA replication in human cells: a missing link? |
Q37025967 | R-loops and nicks initiate DNA breakage and genome instability in non-growing Escherichia coli |
Q38636495 | R-loops in bacterial transcription: their causes and consequences |
Q35598590 | RNase HI Is Essential for Survival of Mycobacterium smegmatis |
Q64389775 | RNase HII Saves rnhA Mutant Escherichia coli from R-Loop-Associated Chromosomal Fragmentation |
Q40974663 | Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase |
Q27931495 | Rad52 associates with RPA and functions with rad55 and rad57 to assemble meiotic recombination complexes |
Q35186084 | RecA protein-dependent R-loop formation in vitro. |
Q39527474 | RecA-mediated rescue of Escherichia coli strains with replication forks arrested at the terminus |
Q30765550 | RecA: Regulation and Mechanism of a Molecular Search Engine. |
Q64389445 | RecBCD coordinates repair of two ends at a DNA double-strand break, preventing aberrant chromosome amplification |
Q24650931 | RecBCD enzyme and the repair of double-stranded DNA breaks |
Q39117161 | RecG controls DNA amplification at double-strand breaks and arrested replication forks |
Q39728517 | RecG helicase activity at three- and four-strand DNA structures. |
Q37014705 | RecG interacts directly with SSB: implications for stalled replication fork regression |
Q42410405 | RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli |
Q35089091 | Recombinase and translesion DNA polymerase decrease the speed of replication fork progression during the DNA damage response in Escherichia coli cells |
Q56902268 | Recombination and its roles in DNA repair, cellular immortalization and cancer |
Q34444668 | Recombination and replication. |
Q64387300 | Recombinational DNA repair in a cellular context: a search for the homology search |
Q28776226 | Recombinational crossroads: eukaryotic enzymes and the limits of bacterial precedents |
Q29619755 | Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda |
Q24606060 | Regulation of homologous recombination: Chi inactivates RecBCD enzyme by disassembly of the three subunits |
Q42129547 | Remodeling of RecG Helicase at the DNA Replication Fork by SSB Protein |
Q64100696 | Rep and UvrD Antagonize One Another at Stalled Replication Forks and This Is Exacerbated by SSB |
Q35952270 | Repair of transposable phage Mu DNA insertions begins only when the E. coli replisome collides with the transpososome |
Q24675453 | Repairing a double-strand chromosome break by homologous recombination: revisiting Robin Holliday's model |
Q39188771 | Replication Restart in Bacteria |
Q26741314 | Replication Termination: Containing Fork Fusion-Mediated Pathologies in Escherichia coli |
Q42696576 | Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase |
Q42575711 | Replication fork reactivation in a dnaC2 mutant at non-permissive temperature in Escherichia coli |
Q42010788 | Replication fork stalling and cell cycle arrest in UV-irradiated Escherichia coli |
Q37588219 | Replication of the Escherichia coli chromosome in RNase HI-deficient cells: multiple initiation regions and fork dynamics. |
Q42275355 | Replication-Transcription Conflicts Generate R-Loops that Orchestrate Bacterial Stress Survival and Pathogenesis |
Q99412090 | Replisome bypass of transcription complexes and R-loops |
Q33993970 | Requirement for homologous recombination functions for expression of the mutA mistranslator tRNA-induced mutator phenotype in Escherichia coli |
Q42012393 | Requirements for replication restart proteins during constitutive stable DNA replication in Escherichia coli K-12. |
Q34311622 | Rescue of arrested replication forks by homologous recombination |
Q38134624 | Resolving branched DNA intermediates with structure-specific nucleases during replication in eukaryotes. |
Q39538408 | Restart of DNA replication in Gram-positive bacteria: functional characterisation of the Bacillus subtilis PriA initiator |
Q33770306 | Reverse genetic studies of homologous DNA recombination using the chicken B-lymphocyte line, DT40. |
Q36512201 | Rho-dependent transcription termination is essential to prevent excessive genome-wide R-loops in Escherichia coli |
Q26864225 | Ribonucleotides in bacterial DNA |
Q36701282 | Role of DNA replication proteins in double-strand break-induced recombination in Saccharomyces cerevisiae |
Q33805205 | Role of PriA in replication fork reactivation in Escherichia coli |
Q30797538 | Role of the Schizosaccharomyces pombe F-Box DNA helicase in processing recombination intermediates |
Q34470485 | Roles of E. coli double-strand-break-repair proteins in stress-induced mutation |
Q41081029 | Roles of PriA protein and double-strand DNA break repair functions in UV-induced restriction alleviation in Escherichia coli |
Q35221111 | Roles of type 1A topoisomerases in genome maintenance in Escherichia coli |
Q30008790 | SSB and the RecG DNA helicase: an intimate association to rescue a stalled replication fork |
Q27935087 | Senataxin associates with replication forks to protect fork integrity across RNA-polymerase-II-transcribed genes |
Q40950393 | SeqA structures behind Escherichia coli replication forks affect replication elongation and restart mechanisms |
Q40429985 | Sister chromatid gene conversion is a prominent double-strand break repair pathway in mammalian cells |
Q34978255 | Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. |
Q40431401 | Srs2 DNA helicase is involved in checkpoint response and its regulation requires a functional Mec1-dependent pathway and Cdk1 activity |
Q42873146 | Srs2 and Sgs1 DNA helicases associate with Mre11 in different subcomplexes following checkpoint activation and CDK1-mediated Srs2 phosphorylation |
Q38860416 | Stalled replication fork rescue requires a novel DNA helicase |
Q36677142 | Static and Dynamic Factors Limit Chromosomal Replication Complexity in Escherichia coli, Avoiding Dangers of Runaway Overreplication |
Q35626315 | Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference |
Q89975724 | Supercoiling, R-loops, Replication and the Functions of Bacterial Type 1A Topoisomerases |
Q33995751 | T7 single strand DNA binding protein but not T7 helicase is required for DNA double strand break repair |
Q40781109 | The Arg Fingers of Key DnaA Protomers Are Oriented Inward within the Replication Origin oriC and Stimulate DnaA Subcomplexes in the Initiation Complex |
Q40360421 | The Consequences of Replicating in the Wrong Orientation: Bacterial Chromosome Duplication without an Active Replication Origin |
Q43015372 | The DNA Exonucleases of Escherichia coli |
Q38747435 | The Escherichia coli Cryptic Prophage Protein YfdR Binds to DnaA and Initiation of Chromosomal Replication Is Inhibited by Overexpression of the Gene Cluster yfdQ-yfdR-yfdS-yfdT |
Q37516281 | The Escherichia coli argU10(Ts) phenotype is caused by a reduction in the cellular level of the argU tRNA for the rare codons AGA and AGG. |
Q24551864 | The Rad51 paralog Rad51B promotes homologous recombinational repair |
Q39679859 | The RuvABC resolvase is indispensable for recombinational repair in sbcB15 mutants of Escherichia coli |
Q34279693 | The Schizosaccharomyces pombe rad60 gene is essential for repairing double-strand DNA breaks spontaneously occurring during replication and induced by DNA-damaging agents. |
Q35908868 | The Yin and Yang of R-loop biology |
Q24630851 | The architecture of the human Rad54-DNA complex provides evidence for protein translocation along DNA |
Q92023905 | The balancing act of R-loop biology: The good, the bad, and the ugly |
Q33867563 | The breast cancer susceptibility gene, BRCA2: at the crossroads between DNA replication and recombination? |
Q39835877 | The carboxyl terminus of Brca2 links the disassembly of Rad51 complexes to mitotic entry |
Q22066232 | The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes |
Q38540510 | The membrane: transertion as an organizing principle in membrane heterogeneity. |
Q38257019 | The replication checkpoint protects fork stability by releasing transcribed genes from nuclear pores. |
Q42391802 | The right half of the Escherichia coli replication origin is not essential for viability, but facilitates multi-forked replication |
Q34446766 | Timely binding of IHF and Fis to DARS2 regulates ATP-DnaA production and replication initiation. |
Q94464339 | Too Much of a Good Thing: How Ectopic DNA Replication Affects Bacterial Replication Dynamics |
Q58730616 | Topoisomerases I and III inhibit R-loop formation to prevent unregulated replication in the chromosomal Ter region of Escherichia coli |
Q38236218 | Transcription and recombination: when RNA meets DNA. |
Q39567802 | Transcriptional analysis and mutation of a dnaA-like gene in Synechocystis sp. strain PCC 6803. |
Q34603730 | Transient and heritable mutators in adaptive evolution in the lab and in nature |
Q34768582 | Two novel PIWI families: roles in inter-genomic conflicts in bacteria and Mediator-dependent modulation of transcription in eukaryotes |
Q33967896 | UvsW protein regulates bacteriophage T4 origin-dependent replication by unwinding R-loops |
Q34235259 | Validation of bacterial replication termination models using simulation of genomic mutations |
Q33995863 | Viability of rep recA mutants depends on their capacity to cope with spontaneous oxidative damage and on the DnaK chaperone protein |
Q64087622 | Whole Proteome Clustering of 2,307 Proteobacterial Genomes Reveals Conserved Proteins and Significant Annotation Issues |
Q39392218 | iOri-Human: identify human origin of replication by incorporating dinucleotide physicochemical properties into pseudo nucleotide composition |
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