The evolution of function in strictosidine synthase-like proteins

scientific article published on 21 September 2011

The evolution of function in strictosidine synthase-like proteins is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1002/PROT.23135
P932PMC publication ID3561908
P698PubMed publication ID21948213

P50authorSarah E. O'ConnorQ39859274
Michael HicksQ47454777
Patricia BabbittQ50486645
Jenna CaldwellQ59752714
Lesley-Ann GiddingsQ59756746
P2093author name stringAlan E Barber
P2860cites workAnnotation error in public databases: misannotation of molecular function in enzyme superfamiliesQ21145347
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Human paraoxonases (PON1, PON2, and PON3) are lactonases with overlapping and distinct substrate specificitiesQ24298200
Crystal structure of human senescence marker protein 30: insights linking structural, enzymatic, and physiological functionsQ24304361
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The structure of Rauvolfia serpentina strictosidine synthase is a novel six-bladed beta-propeller fold in plant proteinsQ24542391
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Directed evolution of mammalian paraoxonases PON1 and PON3 for bacterial expression and catalytic specializationQ24598027
Strictosidine synthase: mechanism of a Pictet-Spengler catalyzing enzymeQ24612814
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
Ongoing and future developments at the Universal Protein ResourceQ24616298
The Pfam protein families databaseQ24644670
MrBayes 3: Bayesian phylogenetic inference under mixed modelsQ26778438
Crystal structure of diisopropylfluorophosphatase from Loligo vulgarisQ27632948
Statistical analysis of crystallographic data obtained from squid ganglion DFPase at 0.85 Å resolutionQ27642204
Structural and mutational analyses of Drp35 from Staphylococcus aureus: a possible mechanism for its lactonase activityQ27643299
Reversed enantioselectivity of diisopropyl fluorophosphatase against organophosphorus nerve agents by rational designQ27658082
Structural characterization of the catalytic calcium-binding site in diisopropyl fluorophosphatase (DFPase)--comparison with related beta-propeller enzymesQ27660124
A general method applicable to the search for similarities in the amino acid sequence of two proteinsQ27860563
UCSF Chimera--a visualization system for exploratory research and analysisQ27860666
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approachQ27860716
Divergent evolution of enzymatic function: mechanistically diverse superfamilies and functionally distinct suprafamiliesQ28200745
Oxyluciferin, a luminescence product of firefly luciferase, is enzymatically regenerated into luciferinQ28206965
Structure-reactivity studies of serum paraoxonase PON1 suggest that its native activity is lactonaseQ28245589
The integrated microbial genomes system: an expanding comparative analysis resourceQ28262793
Senescence marker protein 30 functions as gluconolactonase in L-ascorbic acid biosynthesis, and its knockout mice are prone to scurvyQ28578755
The Universal Protein Resource (UniProt) in 2010Q28749229
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequencesQ29547172
Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inferenceQ29614994
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A new generation of homology search tools based on probabilistic inferenceQ29616170
Evolution of function in protein superfamilies, from a structural perspective.Q30328084
Mutational and structural studies of the diisopropylfluorophosphatase from Loligo vulgaris shed new light on the catalytic mechanism of the enzyme.Q30350915
Using sequence similarity networks for visualization of relationships across diverse protein superfamilies.Q30374720
Isolation and characterization of the gene encoding gluconolactonase from Zymomonas mobilisQ31043283
Binding of a designed substrate analogue to diisopropyl fluorophosphatase: implications for the phosphotriesterase mechanismQ31062570
Strictosidine synthase from Rauvolfia serpentina: analysis of a gene involved in indole alkaloid biosynthesisQ31143670
3D-Structure and function of strictosidine synthase--the key enzyme of monoterpenoid indole alkaloid biosynthesisQ33320116
Inhibitory potency against human acetylcholinesterase and enzymatic hydrolysis of fluorogenic nerve agent mimics by human paraoxonase 1 and squid diisopropyl fluorophosphataseQ33327276
Enzyme promiscuity: a mechanistic and evolutionary perspectiveQ34021669
Lactonase and lactonizing activities of human serum paraoxonase (PON1) and rabbit serum PON3.Q34229017
Substrate specificity of strictosidine synthaseQ34494915
Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage databaseQ34496170
Camptothecin biosynthetic genes in hairy roots of Ophiorrhiza pumila: cloning, characterization and differential expression in tissues and by stress compoundsQ34648441
The cDNA clone for strictosidine synthase from Rauvolfia serpentina. DNA sequence determination and expression in Escherichia coliQ34661310
Evolution of enzyme superfamiliesQ36578374
Lactone-ring-cleaving enzyme: genetic analysis, novel RNA editing, and evolutionary implicationsQ36607041
Protein function prediction--the power of multiplicityQ37404175
Role of adhesion in arthropod immune recognitionQ37594785
Lactonases with organophosphatase activity: structural and evolutionary perspectivesQ37685391
Directed biosynthesis of alkaloid analogs in the medicinal plant Catharanthus roseusQ40273992
Nucleotide sequence of a cDNA encoding the vacuolar protein strictosidine synthase from Catharanthus roseusQ40522813
A member of the second carbohydrate uptake subfamily of ATP-binding cassette transporters is responsible for ribonucleoside uptake in Streptococcus mutansQ41063169
Helix pomatia lectin, an inducer of Drosophila immune response, binds to hemomucin, a novel surface mucinQ41197351
Molecular characterization and expression analysis of a new cDNA encoding strictosidine synthase from Ophiorrhiza japonica.Q42602428
Molecular analysis of the xylFGH operon, coding for xylose ABC transport, in Thermoanaerobacter ethanolicusQ42623893
Purification and characterization of a novel lactonohydrolase, catalyzing the hydrolysis of aldonate lactones and aromatic lactones, from Fusarium oxysporumQ44909586
Senescence marker protein-30 is a unique enzyme that hydrolyzes diisopropyl phosphorofluoridate in the liverQ44976550
The histidine 115-histidine 134 dyad mediates the lactonase activity of mammalian serum paraoxonasesQ46890415
Inactive enzyme-homologues find new function in regulatory processesQ47311616
The nucleotide sequences of the rbsD, rbsA, and rbsC genes of Escherichia coli K12.Q47598159
Cell wall-affecting antibiotics induce expression of a novel gene, drp35, in Staphylococcus aureusQ47918354
Redesign of a central enzyme in alkaloid biosynthesis.Q51102596
Human serum paraoxonase (PON1) isozymes Q and R hydrolyze lactones and cyclic carbonate estersQ73093312
Animal and plant members of a gene family with similarity to alkaloid-synthesizing enzymesQ73704354
P4510describes a project that usesCytoscapeQ3699942
P433issue11
P407language of work or nameEnglishQ1860
P921main subjectprotein evolutionQ59870539
P304page(s)3082-3098
P577publication date2011-09-21
P1433published inProteinsQ7251514
P1476titleThe evolution of function in strictosidine synthase-like proteins
P478volume79

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Q30415265Root parasitic plant Orobanche aegyptiaca and shoot parasitic plant Cuscuta australis obtained Brassicaceae-specific strictosidine synthase-like genes by horizontal gene transfer
Q27318584Subunit composition of a DEG/ENaC mechanosensory channel of Caenorhabditis elegans
Q57618832The Nucleophilic Attack Six-Bladed β-Propeller (N6P) Superfamily
Q37661971The Structure-Function Linkage Database

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