scholarly article | Q13442814 |
P2093 | author name string | Cory G Toyota | |
John M McAfee | |||
Alexandria C Mills | |||
Eleanor R Giglio | |||
Elise M Fontenot | |||
Karen E Ezelle | |||
Kristin M Salmon | |||
Lauren N Gabreski | |||
Maryam N Qureshi | |||
P2860 | cites work | Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection | Q22122301 |
pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli | Q24539204 | ||
Nonchromosomal Antibiotic Resistance in Bacteria: Genetic Transformation of Escherichia coli by R-Factor DNA | Q24562997 | ||
Differential substrate specificity and kinetic behavior of Escherichia coli YfdW and Oxalobacter formigenes formyl coenzyme A transferase | Q24655270 | ||
Purification and characterization of formyl-coenzyme A transferase from Oxalobacter formigenes | Q24681970 | ||
New insights into structure-function relationships of oxalyl CoA decarboxylase from Escherichia coli | Q27662338 | ||
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products | Q27860842 | ||
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase | Q28220384 | ||
Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research | Q29619122 | ||
Structural basis for activation of the thiamin diphosphate-dependent enzyme oxalyl-CoA decarboxylase by adenosine diphosphate. | Q30351586 | ||
Escherichia coli acid resistance: cAMP receptor protein and a 20 bp cis-acting sequence control pH and stationary phase expression of the gadA and gadBC glutamate decarboxylase genes | Q32135328 | ||
Rapid acid treatment of Escherichia coli: transcriptomic response and recovery | Q33321349 | ||
Acid tolerance of enterohemorrhagic Escherichia coli | Q33489673 | ||
Acetate and formate stress: opposite responses in the proteome of Escherichia coli | Q33555165 | ||
Hydrogenase-3 contributes to anaerobic acid resistance of Escherichia coli | Q33559866 | ||
Oxalate-degrading activity in Bifidobacterium animalis subsp. lactis: impact of acidic conditions on the transcriptional levels of the oxalyl coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes | Q33624952 | ||
Acid stress response in Escherichia coli: mechanism of regulation of gadA transcription by RcsB and GadE. | Q33922436 | ||
Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance response | Q33995875 | ||
Characteristics of anaerobic oxalate-degrading enrichment cultures from the rumen | Q34046761 | ||
Regulatory network of acid resistance genes in Escherichia coli | Q34190517 | ||
Calcium-dependent bacteriophage DNA infection | Q34223120 | ||
Sequence of a gene cluster from Klebsiella pneumoniae encoding malonate decarboxylase and expression of the enzyme in Escherichia coli | Q34431253 | ||
Regulation of acid resistance by connectors of two-component signal transduction systems in Escherichia coli | Q34740460 | ||
Escherichia coli gene expression responsive to levels of the response regulator EvgA. | Q34838928 | ||
Comparative analysis of extreme acid survival in Salmonella typhimurium, Shigella flexneri, and Escherichia coli | Q35590338 | ||
Oxalobacter formigenes and its role in oxalate metabolism in the human gut. | Q35634094 | ||
Escherichia coli acid resistance: tales of an amateur acidophile | Q35923268 | ||
Weak organic acids: a panoply of effects on bacteria | Q35929672 | ||
Acid and base resistance in Escherichia coli and Shigella flexneri: role of rpoS and growth pH. | Q36106069 | ||
Purification and characterization of oxalyl-coenzyme A decarboxylase from Oxalobacter formigenes | Q36177064 | ||
Oxalobacter formigenes gen. nov., sp. nov.: oxalate-degrading anaerobes that inhabit the gastrointestinal tract | Q36495169 | ||
Analysis of substrate-binding elements in OxlT, the oxalate:formate antiporter of Oxalobacter formigenes | Q36744250 | ||
External concentration of organic acid anions and pH: key independent variables for studying how organic acids inhibit growth of bacteria in mildly acidic foods | Q37387715 | ||
Escherichia coli glutamate- and arginine-dependent acid resistance systems increase internal pH and reverse transmembrane potential | Q37494481 | ||
Characterization of EvgAS-YdeO-GadE branched regulatory circuit governing glutamate-dependent acid resistance in Escherichia coli | Q37583355 | ||
Oxalate-degrading bacteria of the human gut as probiotics in the management of kidney stone disease | Q37770140 | ||
Antagonistic role of H-NS and GadX in the regulation of the glutamate decarboxylase-dependent acid resistance system in Escherichia coli | Q38328783 | ||
Control of acid resistance in Escherichia coli | Q39496012 | ||
Overexpression of the response regulator evgA of the two-component signal transduction system modulates multidrug resistance conferred by multidrug resistance transporters | Q39502594 | ||
Induction of acid resistance of Salmonella typhimurium by exposure to short-chain fatty acids | Q39563466 | ||
Perturbation of anion balance during inhibition of growth of Escherichia coli by weak acids | Q39564551 | ||
Functional characterization and regulation of gadX, a gene encoding an AraC/XylS-like transcriptional activator of the Escherichia coli glutamic acid decarboxylase system | Q39679110 | ||
Gene expression profiling of the pH response in Escherichia coli | Q39680649 | ||
Regulation of katF and katE in Escherichia coli K-12 by weak acids | Q39935387 | ||
Mechanisms of transcription activation exerted by GadX and GadW at the gadA and gadBC gene promoters of the glutamate-based acid resistance system in Escherichia coli | Q41063822 | ||
The effects of fermentation acids on bacterial growth | Q41610162 | ||
Oxalate:formate exchange. The basis for energy coupling in Oxalobacter | Q41957209 | ||
The Escherichia coli trmE (mnmE) gene, involved in tRNA modification, codes for an evolutionarily conserved GTPase with unusual biochemical properties | Q42689609 | ||
Three-dimensional structure of a bacterial oxalate transporter. | Q44064226 | ||
A biological role for prokaryotic ClC chloride channels | Q44183187 | ||
Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes | Q44948912 | ||
GadX/GadW-dependent regulation of the Escherichia coli acid fitness island: transcriptional control at the gadY-gadW divergent promoters and identification of four novel 42 bp GadX/GadW-specific binding sites | Q45745812 | ||
Acid response of exponentially growing Escherichia coli K-12. | Q46843405 | ||
In vitro methane emission and acetate:propionate ratio are decreased when artificial stimulation of the rumen wall is combined with increasing grain diets in sheep | Q46879229 | ||
Oxalate consumption by lactobacilli: evaluation of oxalyl-CoA decarboxylase and formyl-CoA transferase activity in Lactobacillus acidophilus | Q46937606 | ||
Cloning, sequencing, and expression in escherichia coli of OxlT, the oxalate:formate exchange protein of Oxalobacter formigenes | Q48065497 | ||
The Escherichia coli AraC-family regulators GadX and GadW activate gadE, the central activator of glutamate-dependent acid resistance | Q50069893 | ||
The acid tolerance response of Salmonella typhimurium provides protection against organic acids | Q50136930 | ||
Mg2+ as an extracellular signal: environmental regulation of Salmonella virulence | Q50140541 | ||
BioMetals: a historical and personal perspective. | Q53052557 | ||
The survival benefit of short-chain organic acids and the inducible arginine and lysine decarboxylase genes for Escherichia coli. | Q54587846 | ||
The effect of food preservatives on pH homeostasis in Escherichia coli | Q70413366 | ||
In Vitro Degradation of Oxalate and of Cellulose by Rumen Ingesta from Sheep Fed Halogeton Glomeratus1 | Q71991502 | ||
Identification of a Sex-factor-affinity Site in E. coli as | Q72911552 | ||
Glyoxylate synthesis, and its modulation and influence on oxalate synthesis | Q77449183 | ||
The importance of pH in the regulation of ruminal acetate to propionate ratio and methane production in vitro | Q77801798 | ||
Oxidation of glyoxylic acid to oxalic acid by glycolic acid oxidase | Q78992647 | ||
P433 | issue | 7 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | Escherichia coli K-12 | Q21399437 |
P304 | page(s) | 1446-1455 | |
P577 | publication date | 2013-01-18 | |
P1433 | published in | Journal of Bacteriology | Q478419 |
P1476 | title | YfdW and YfdU are required for oxalate-induced acid tolerance in Escherichia coli K-12. | |
P478 | volume | 195 |
Q43065961 | Characterization of mutations in the PAS domain of the EvgS sensor kinase selected by laboratory evolution for acid resistance in Escherichia coli |
Q39197061 | Draft genome sequence of the first acid-tolerant sulfate-reducing deltaproteobacterium Desulfovibrio sp. TomC having potential for minewater treatment. |
Q27679519 | Function and X-Ray crystal structure of Escherichia coli YfdE |
Q38952381 | Genome sequence of the acid-tolerant Desulfovibrio sp. DV isolated from the sediments of a Pb-Zn mine tailings dam in the Chita region, Russia. |
Q39003102 | Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area |
Q39193854 | Genomic insights into a new acidophilic, copper-resistant Desulfosporosinus isolate from the oxidized tailings area of an abandoned gold mine |
Q38900207 | Global transcriptional response of Dickeya dadantii to environmental stimuli relevant to the plant infection |
Q37314836 | Hyperoxaluria leads to dysbiosis and drives selective enrichment of oxalate metabolizing bacterial species in recurrent kidney stone endures |
Q58780726 | Regulator SlyA Controls Bacterial Acid Resistance by Directly Activating the Glutamate Decarboxylation System |
Q50276031 | Transcriptome Profiling Reveals Interplay of Multifaceted Stress Response in Escherichia coli on Exposure to Glutathione and Ciprofloxacin |
Q51737004 | Trees, fungi and bacteria: tripartite metatranscriptomics of a root microbiome responding to soil contamination. |
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