pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli

scientific article

pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.184.15.4246-4258.2002
P3181OpenCitations bibliographic resource ID1388152
P932PMC publication ID135203
P698PubMed publication ID12107143
P5875ResearchGate publication ID11271587

P2093author name stringJoan L Slonczewski
Brian Schmidt
Yuliya N Yoncheva
D Michael Barnhart
Dawn M Stancik
Lauren M Stancik
P2860cites workArginine catabolism and the arginine succinyltransferase pathway in Escherichia coliQ24521436
Quorum sensing in Escherichia coli, Salmonella typhimurium, and Vibrio harveyi: a new family of genes responsible for autoinducer productionQ24672151
Alkaline induction of a novel gene locus, alx, in Escherichia coliQ24673303
Molecular analysis of two genes of the Escherichia coli gab cluster: nucleotide sequence of the glutamate:succinic semialdehyde transaminase gene (gabT) and characterization of the succinic semialdehyde dehydrogenase gene (gabD)Q24682620
The structure of the outer membrane protein OmpX from Escherichia coli reveals possible mechanisms of virulenceQ27620219
Identification of a central regulator of stationary-phase gene expression inEscherichia coliQ27976519
An activator of glutamate decarboxylase genes regulates the expression of enteropathogenic Escherichia coli virulence genes through control of the plasmid-encoded regulator, Per.Q30716869
Escherichia coli acid resistance: cAMP receptor protein and a 20 bp cis-acting sequence control pH and stationary phase expression of the gadA and gadBC glutamate decarboxylase genesQ32135328
Acetate and formate stress: opposite responses in the proteome of Escherichia coliQ33555165
LuxR- and acyl-homoserine-lactone-controlled non-lux genes define a quorum-sensing regulon in Vibrio fischeriQ33603187
Acid-sensitive enteric pathogens are protected from killing under extremely acidic conditions of pH 2.5 when they are inoculated onto certain solid food sources.Q33718125
Role of the Escherichia coli SurA protein in stationary-phase survival.Q33739792
Expression of outer membrane proteins in Escherichia coli growing at acid pH.Q33986724
Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresisQ33991664
Escherichia coli intracellular pH, membrane potential, and cell growthQ39968207
Isolation and properties of Escherichia coli K-12 mutants impaired in the utilization of gamma-aminobutyrateQ39978325
Influence of pH on bacterial gene expressionQ40854185
From acids to osmZ: multiple factors influence synthesis of the OmpF and OmpC porins in Escherichia coli.Q41113929
The effects of fermentation acids on bacterial growthQ41610162
The effect of the pH of the medium during growth on the enzymic activities of bacteria (Escherichia coli and Micrococcus lysodeikticus) and the biological significance of the changes producedQ42540231
Identification of the polyamine-induced protein as a periplasmic oligopeptide binding proteinQ42633042
Identification of sigma S-dependent genes associated with the stationary-phase acid-resistance phenotype of Shigella flexneriQ42642088
A microtiter plate-based system for the semiautomated growth and assay of bacterial cells for beta-galactosidase activityQ44105839
Thioredoxin-linked "thiol peroxidase" from periplasmic space of Escherichia coliQ48069055
Cholera toxin transcriptional activator toxR is a transmembrane DNA binding proteinQ48350458
Control of carbon flux to acetate excretion during growth of Escherichia coli in batch and continuous cultures.Q54341294
Studies on the synthesis of the Fe-S cluster of dihydroxy-acid dehydratase in escherichia coli crude extract. Isolation of O-acetylserine sulfhydrylases A and B and beta-cystathionase based on their ability to mobilize sulfur from cysteine and to paQ54585563
Amino acid composition and N-terminal sequence of purified cystine binding protein of Escherichia coli.Q54663949
The Effects of Fermentation Acids on Bacterial GrowthQ56029959
Regulation of alpha-ketoglutarate dehydrogenase formation in Escherichia coliQ71160718
Bacterial protein disulfide isomerase: efficient catalysis of oxidative protein folding at acidic pHQ72551904
A pleîotropic acid phosphatase-deficient mutant of Escherichia coli shows premature termination in the dsbA gene. Use of dsbA::phoA fusions to localize a structurally important domain in DsbAQ72697656
Role of iron and superoxide for generation of hydroxyl radical, oxidative DNA lesions, and mutagenesis in Escherichia coliQ73212083
Proteomic analysis of pH-dependent stress responses in Escherichia coli and Helicobacter pylori using two-dimensional gel electrophoresisQ78635314
Isolation and properties of Escherichia coli K-12 mutants impaired in the utilization of gamma-aminobutyrate.Q104945522
Mutations enhancing amino acid catabolism confer a growth advantage in stationary phaseQ33992996
Involvement of carbon source and acetyl phosphate in the external-pH-dependent expression of porin genes in Escherichia coliQ33993453
Expression of a sodium proton antiporter (NhaA) in Escherichia coli is induced by Na+ and Li+ ionsQ33994569
Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance responseQ33995875
Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylateQ33996373
Indole can act as an extracellular signal in Escherichia coliQ33996505
External-pH-dependent expression of the maltose regulon and ompF gene in Escherichia coli is affected by the level of glycerol kinase, encoded by glpK.Q33996932
The LuxS family of bacterial autoinducers: biosynthesis of a novel quorum-sensing signal moleculeQ34086014
CATALYTIC PROPERTIES OF TRYPTOPHANASE, A MULTIFUNCTIONAL PYRIDOXAL PHOSPHATE ENZYMEQ34400099
Escherichia coli genes regulated by cell-to-cell signalingQ35135075
Mechanisms of acid resistance in enterohemorrhagic Escherichia coliQ35192892
Lethal oxidative damage and mutagenesis are generated by iron in delta fur mutants of Escherichia coli: protective role of superoxide dismutaseQ35584018
Proteins induced in Escherichia coli by benzoic acidQ35634101
Dual regulation of inaA by the multiple antibiotic resistance (mar) and superoxide (soxRS) stress response systems of Escherichia coliQ35979443
Analysis of proteins synthesized by Salmonella typhimurium during growth within a host macrophageQ36102098
Acid and base resistance in Escherichia coli and Shigella flexneri: role of rpoS and growth pH.Q36106069
Adaptive acidification tolerance response of Salmonella typhimurium.Q36158004
Mu d-directed lacZ fusions regulated by low pH in Escherichia coliQ36239957
Rho-dependent transcription termination in the tryptophanase operon leader region of Escherichia coli K-12.Q36283992
Proteins induced by anaerobiosis in Escherichia coliQ36327219
pH homeostasis in Escherichia coli: measurement by 31P nuclear magnetic resonance of methylphosphonate and phosphate.Q36374847
Mecillinam resistance in Escherichia coli is conferred by loss of a second activity of the AroK protein.Q36574585
A glutamate-dependent acid resistance gene in Escherichia coliQ36574708
Metabolism of cyclic adenosine 3',5'-monophosphate and induction of tryptophanase in Escherichia coliQ36606973
A third periplasmic transport system for L-arginine in Escherichia coli: molecular characterization of the artPIQMJ genes, arginine binding and transportQ36819131
Downregulation of Escherichia coli yfiD expression by FNR occupying a site at -93.5 involves the AR1-containing face of FNR.Q38332556
Control of acid resistance in Escherichia coliQ39496012
Fur positive regulation of iron superoxide dismutase in Escherichia coli: functional analysis of the sodB promoterQ39500041
Functional characterization and regulation of gadX, a gene encoding an AraC/XylS-like transcriptional activator of the Escherichia coli glutamic acid decarboxylase systemQ39679110
Nucleotide sequence of the adi gene, which encodes the biodegradative acid-induced arginine decarboxylase of Escherichia coliQ39885164
Roles of LysP and CadC in mediating the lysine requirement for acid induction of the Escherichia coli cad operonQ39932109
Nucleotide sequence of the Escherichia coli cad operon: a system for neutralization of low extracellular pH.Q39933772
Biosynthesis of riboflavin: cloning, sequencing, and expression of the gene coding for 3,4-dihydroxy-2-butanone 4-phosphate synthase of Escherichia coliQ39934748
Decay of ompA mRNA and processing of 9S RNA are immediately affected by shifts in growth rate, but in opposite mannersQ39935803
P433issue15
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
P304page(s)4246-58
P577publication date2002-08-01
P1433published inJournal of BacteriologyQ478419
P1476titlepH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli
P478volume184

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