pH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12.

scientific article

pH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.187.1.304-319.2005
P932PMC publication ID538838
P698PubMed publication ID15601715

P2093author name stringJoan L Slonczewski
Elizabeth Yohannes
Lisa M Maurer
Michael Radmacher
Sandra S Bondurant
P2860cites workpH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coliQ24539204
Cluster analysis and display of genome-wide expression patternsQ24644463
Alkaline induction of a novel gene locus, alx, in Escherichia coliQ24673303
Microarray results: how accurate are they?Q24803108
HDEA, a periplasmic protein that supports acid resistance in pathogenic enteric bacteriaQ27620904
Model-based analysis of oligonucleotide arrays: expression index computation and outlier detectionQ27860727
Novel small RNA-encoding genes in the intergenic regions of Escherichia coliQ28205853
Analyzing high-density oligonucleotide gene expression array dataQ30619702
Principal component analysis for clustering gene expression data.Q30661940
Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array dataQ30673320
Escherichia coli acid resistance: cAMP receptor protein and a 20 bp cis-acting sequence control pH and stationary phase expression of the gadA and gadBC glutamate decarboxylase genesQ32135328
Acetate and formate stress: opposite responses in the proteome of Escherichia coliQ33555165
A low pH-inducible, PhoPQ-dependent acid tolerance response protects Salmonella typhimurium against inorganic acid stressQ33730040
The pH 6 antigen of Yersinia pestis binds to beta1-linked galactosyl residues in glycosphingolipidsQ33763732
Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresisQ33991664
Involvement of carbon source and acetyl phosphate in the external-pH-dependent expression of porin genes in Escherichia coliQ33993453
pepA, a gene mediating pH regulation of virulence genes in Vibrio choleraeQ33995198
Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance responseQ33995875
Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylateQ33996373
DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxideQ33996654
External-pH-dependent expression of the maltose regulon and ompF gene in Escherichia coli is affected by the level of glycerol kinase, encoded by glpK.Q33996932
Regulatory network of acid resistance genes in Escherichia coliQ34190517
How Bacteria Assemble FlagellaQ34194719
Regulatory roles for small RNAs in bacteriaQ34194972
Collaborative regulation of Escherichia coli glutamate-dependent acid resistance by two AraC-like regulators, GadX and GadW (YhiW)Q34321388
Histidine-226 is part of the pH sensor of NhaA, a Na+/H+ antiporter in Escherichia coli.Q34355324
Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae.Q42680546
Construction of lac fusions to the inducible arginine- and lysine decarboxylase genes of Escherichia coli K12.Q43906592
Instruction of translating ribosome by nascent peptideQ44135169
Turnover of FlhD and FlhC, master regulator proteins for Salmonella flagellum biogenesis, by the ATP-dependent ClpXP proteaseQ44390470
Excretion and uptake of cadaverine by CadB and its physiological functions in Escherichia coliQ44775874
Autogenous and global control of the flagellar master operon, flhD, in Salmonella typhimuriumQ50134658
Upper gastrointestinal (GI) pH in young, healthy men and women.Q51615125
Regulation of bacterial motility in response to low pH in Escherichia coli: the role of H-NS protein.Q53972186
RcsCDB His-Asp phosphorelay system negatively regulates the flhDC operon in Escherichia coli.Q54521795
Regulatory aspects of alkali tolerance induction in Escherichia coli.Q54587839
Overproduction and purification of a functional Na+/H+ antiporter coded by nhaA (ant) from Escherichia coliQ68238305
Studies on the intestinal flora. I. The bacterial flora of the gastrointestinal tract in healthy and achlorhydric personsQ69868122
The effect of food preservatives on pH homeostasis in Escherichia coliQ70413366
Proton chemical potential, proton electrical potential and bacterial motilityQ71515882
Multiple paths for nonphysiological transport of K+ in Escherichia coliQ34435541
Short chain fatty acids in human large intestine, portal, hepatic and venous bloodQ34529426
Measurement of gastrointestinal pH profiles in normal ambulant human subjectsQ34530993
pH-dependent catabolic protein expression during anaerobic growth of Escherichia coli K-12.Q34555339
Signal detection and target gene induction by the CpxRA two-component systemQ34892000
Genes of the GadX-GadW regulon in Escherichia coliQ34977584
YjdE (AdiC) is the arginine:agmatine antiporter essential for arginine-dependent acid resistance in Escherichia coliQ35162120
Transcriptional regulation of the proton-translocating ATPase (atpIBEFHAGDC) operon of Escherichia coli: control by cell growth rateQ35613740
Proteins induced in Escherichia coli by benzoic acidQ35634101
Dual regulation of inaA by the multiple antibiotic resistance (mar) and superoxide (soxRS) stress response systems of Escherichia coliQ35979443
Acid and base resistance in Escherichia coli and Shigella flexneri: role of rpoS and growth pH.Q36106069
pH dependence and gene structure of inaA in Escherichia coliQ36120434
DnaK, DnaJ, and GrpE are required for flagellum synthesis in Escherichia coliQ36140461
Mu d-directed lacZ fusions regulated by low pH in Escherichia coliQ36239957
Change in intracellular pH of Escherichia coli mediates the chemotactic response to certain attractants and repellentsQ36320321
Cytoplasmic pH mediates pH taxis and weak-acid repellent taxis of bacteria.Q36320336
pH homeostasis in Escherichia coli: measurement by 31P nuclear magnetic resonance of methylphosphonate and phosphate.Q36374847
Effects of pH and repellent tactic stimuli on protein methylation levels in Escherichia coli.Q36406324
A glutamate-dependent acid resistance gene in Escherichia coliQ36574708
Cytochrome o (cyoABCDE) and d (cydAB) oxidase gene expression in Escherichia coli is regulated by oxygen, pH, and the fnr gene productQ37608513
Development and evaluation of a model predicting the survival of Escherichia coli O157:H7 NCTC 12900 in homemade eggplant salad at various temperatures, pHs, and oregano essential oil concentrationsQ39485887
Control of acid resistance in Escherichia coliQ39496012
Perturbation of anion balance during inhibition of growth of Escherichia coli by weak acidsQ39564551
Accuracy and calibration of commercial oligonucleotide and custom cDNA microarraysQ39607930
Functional characterization and regulation of gadX, a gene encoding an AraC/XylS-like transcriptional activator of the Escherichia coli glutamic acid decarboxylase systemQ39679110
Gene expression profiling of the pH response in Escherichia coliQ39680649
Effect of intracellular pH on rotational speed of bacterial flagellar motorsQ39706079
DNA microarray analyses of the long-term adaptive response of Escherichia coli to acetate and propionate.Q39734749
Regulation of the alternative sigma factor sigma(E) during initiation, adaptation, and shutoff of the extracytoplasmic heat shock response in Escherichia coliQ39743804
Influence of gastric acidity on bacterial and parasitic enteric infections. A perspectiveQ39921807
Roles of LysP and CadC in mediating the lysine requirement for acid induction of the Escherichia coli cad operonQ39932109
An alkaline shift induces the heat shock response in Escherichia coliQ39955885
Induction of SOS functions by alkaline intracellular pH in Escherichia coliQ39961647
Interconversion of components of the bacterial proton motive force by electrogenic potassium transportQ39970793
The effects of fermentation acids on bacterial growthQ41610162
Cation/proton antiport systems in Escherichia coli. Absence of potassium/proton antiporter activity in a pH-sensitive mutantQ41613799
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectoxidative stressQ898814
Escherichia coli K-12Q21399437
P304page(s)304-319
P577publication date2005-01-01
P1433published inJournal of BacteriologyQ478419
P1476titlepH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12.
P478volume187

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