review article | Q7318358 |
scholarly article | Q13442814 |
P50 | author | Slavica Jonić | Q42758841 |
P2093 | author name string | C O S Sorzano | |
E Larquet | |||
N Boisset | |||
S Marco | |||
M Cottevieille | |||
P2860 | cites work | Lipid-protein interactions in double-layered two-dimensional AQP0 crystals | Q22251098 |
Solution structure of the E. coli 70S ribosome at 11.5 A resolution | Q27621780 | ||
Crystal structure of dihydropyrimidine dehydrogenase, a major determinant of the pharmacokinetics of the anti-cancer drug 5-fluorouracil | Q27629628 | ||
Cross-talk and ammonia channeling between active centers in the unexpected domain arrangement of glutamate synthase | Q27629777 | ||
The structure of bacteriorhodopsin at 3.0 A resolution based on electron crystallography: implication of the charge distribution | Q27639782 | ||
Structure and gating mechanism of the acetylcholine receptor pore | Q27641514 | ||
Adding the Third Dimension to Virus Life Cycles: Three-Dimensional Reconstruction of Icosahedral Viruses from Cryo-Electron Micrographs | Q27702159 | ||
SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields | Q27860560 | ||
EMAN: semiautomated software for high-resolution single-particle reconstructions | Q27860772 | ||
Accurate determination of local defocus and specimen tilt in electron microscopy | Q27861008 | ||
Computer visualization of three-dimensional image data using IMOD | Q27861080 | ||
A new generation of the IMAGIC image processing system | Q28131751 | ||
Protein structure prediction and structural genomics | Q28190526 | ||
Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology | Q28263554 | ||
Ab initio resolution measurement for single particle structures | Q28267596 | ||
Fourier shell correlation threshold criteria | Q28269234 | ||
Cryo-electron microscopy of vitreous sections | Q28277790 | ||
Visualizing flexibility at molecular resolution: analysis of heterogeneity in single-particle electron microscopy reconstructions | Q36698585 | ||
Three-dimensional reconstruction from random projections: orientational alignment via Radon transforms | Q36748889 | ||
A common-lines based method for determining orientations for N > 3 particle projections simultaneously | Q36832840 | ||
Automatic particle selection: results of a comparative study | Q38462518 | ||
The reconstruction of helical particles with variable pitch. | Q38595433 | ||
Three-dimensional reconstruction of single particles from random and nonrandom tilt series | Q39545938 | ||
Cryo-Transmission Electron Microscopy of Frozen-Hydrated Sections ofEscherichia coliandPseudomonas aeruginosa | Q39997774 | ||
Electron crystallography reveals the structure of metarhodopsin I. | Q40018770 | ||
XMIPP: a new generation of an open-source image processing package for electron microscopy. | Q40476526 | ||
Electron Crystallography of Two-Dimensional Crystals of Membrane Proteins | Q40856095 | ||
Three-dimensional reconstruction of icosahedral particles--the uncommon line | Q41065407 | ||
Dual-axis tomography: an approach with alignment methods that preserve resolution | Q41069925 | ||
Three-dimensional reconstruction from electron micrographs of disordered specimens. I. Method | Q41410941 | ||
Limulus polyphemus hemocyanin: 10 A cryo-EM structure, sequence analysis, molecular modelling and rigid-body fitting reveal the interfaces between the eight hexamers. | Q41625150 | ||
2dx--user-friendly image processing for 2D crystals | Q41625483 | ||
A novel method for improvement of visualization of power spectra for sorting cryo-electron micrographs and their local areas. | Q41625622 | ||
The SAXS solution structure of RF1 differs from its crystal structure and is similar to its ribosome bound cryo-EM structure | Q41626544 | ||
Divalent ion-dependent swelling of tomato bushy stunt virus: a multi-approach study | Q41627015 | ||
The 13 angstroms structure of a chaperonin GroEL-protein substrate complex by cryo-electron microscopy. | Q41627400 | ||
An iterative Fourier-Bessel algorithm for reconstruction of helical structures with severe Bessel overlap | Q41627811 | ||
Seeing GroEL at 6 A resolution by single particle electron cryomicroscopy | Q41628277 | ||
Recognition and separation of single particles with size variation by statistical analysis of their images | Q41628690 | ||
Three-dimensional structure of herpes simplex virus from cryo-electron tomography | Q41628861 | ||
Use of cryo‐negative staining in tomographic reconstruction of biological objects: application to T4 bacteriophage | Q41628990 | ||
Improved common line-based icosahedral particle image orientation estimation algorithms | Q41633638 | ||
Maximum-entropy three-dimensional reconstruction with deconvolution of the contrast transfer function: a test application with adenovirus | Q41633907 | ||
The ribosome at improved resolution: new techniques for merging and orientation refinement in 3D cryo-electron microscopy of biological particles | Q41634823 | ||
Three-dimensional reconstruction from electron micrographs of disordered specimens. II. Implementation and results | Q41636121 | ||
Structure of the gamma-tubulin ring complex: a template for microtubule nucleation | Q41741547 | ||
Basal-body-associated macromolecules: a continuing debate | Q42455779 | ||
Electron diffraction of wet proteins: catalase | Q70411711 | ||
Iterative methods for the three-dimensional reconstruction of an object from projections | Q70476100 | ||
A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy | Q71351775 | ||
Image analysis of helical objects: the Brandeis Helical Package | Q71351785 | ||
CTF determination of images of ice-embedded single particles using a graphics interface | Q71351791 | ||
Reconstruction of three-dimensional images from electron micrographs of structures with helical symmetry | Q71608529 | ||
EM-tomography of section collapse, a non-linear phenomenon | Q71718027 | ||
Spectroscopic electron tomography | Q73691474 | ||
High-pressure freezing for cryoelectron microscopy | Q75294413 | ||
An oscillating cryo‐knife reduces cutting‐induced deformation of vitreous ultrathin sections | Q79095407 | ||
Tetrameric structure of thermostable direct hemolysin from vibrio parahaemolyticus revealed by ultracentrifugation, small-angle X-ray scattering and electron microscopy | Q79286172 | ||
Dynamics of EF-G interaction with the ribosome explored by classification of a heterogeneous cryo-EM dataset | Q80792287 | ||
Novel techniques in electron microscopy | Q35909246 | ||
Ultrastructure of the proximal region of somatic cilia in Paramecium tetraurelia | Q36199505 | ||
Cryo-electron microscopy and three-dimensional reconstruction of the calcium release channel/ryanodine receptor from skeletal muscle | Q36234710 | ||
X-ray tomography of whole cells | Q36254000 | ||
A visual approach to proteomics. | Q36398101 | ||
A method of focused classification, based on the bootstrap 3D variance analysis, and its application to EF-G-dependent translocation | Q36414988 | ||
The development of basal bodies in paramecium | Q36475596 | ||
ART: mathematics and applications. A report on the mathematical foundations and on the applicability to real data of the algebraic reconstruction techniques | Q36528298 | ||
Structure of complex viruses and virus-infected cells by electron cryo tomography | Q36531129 | ||
SPINE high-throughput crystallization, crystal imaging and recognition techniques: current state, performance analysis, new technologies and future aspects | Q36603785 | ||
Computer Averaging of Electron Micrographs of 40 S Ribosomal Subunits | Q36660849 | ||
Realizing the potential of electron cryo-microscopy | Q28295276 | ||
Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy | Q29547579 | ||
Bsoft: image processing and molecular modeling for electron microscopy | Q29614289 | ||
Automated molecular microscopy: the new Leginon system | Q29614290 | ||
Resolution of phase ambiguity in macromolecular crystallography | Q29617474 | ||
FREALIGN: high-resolution refinement of single particle structures | Q30080020 | ||
Protein structure prediction in genomics. | Q30328460 | ||
Structural proteomics: the potential of high-throughput structure determination. | Q30332062 | ||
Multivariate statistical classification of noisy images (randomly oriented biological macromolecules). | Q30412687 | ||
MRC image processing programs | Q30424665 | ||
Structural polymorphism in bacterial EspA filaments revealed by cryo-EM and an improved approach to helical reconstruction | Q30440999 | ||
The iterative helical real space reconstruction method: surmounting the problems posed by real polymers | Q30441328 | ||
Three-dimensional organization of basal bodies from wild-type and delta-tubulin deletion strains of Chlamydomonas reinhardtii | Q30478339 | ||
Visualization of alpha-helices in a 6-angstrom resolution cryoelectron microscopy structure of adenovirus allows refinement of capsid protein assignments | Q30478392 | ||
Automated data collection with a Tecnai 12 electron microscope: applications for molecular imaging by cryomicroscopy. | Q30666103 | ||
Correlation of topographic surface and volume data from three-dimensional electron microscopy. | Q30675693 | ||
Robotic grid loading system for a transmission electron microscope | Q30761073 | ||
Multiple-axis tomography: applications to basal bodies from Paramecium tetraurelia. | Q30808556 | ||
Collaborative EM image processing with the IPLT image processing library and toolbox | Q30822645 | ||
Review: electron crystallography: present excitement, a nod to the past, anticipating the future | Q30827541 | ||
Methods for reconstructing density maps of "single" particles from cryoelectron micrographs to subnanometer resolution. | Q30827563 | ||
Transfer function restoration in 3D electron microscopy via iterative data refinement. | Q30910287 | ||
Observing single biomolecules at work with the atomic force microscope. | Q30913966 | ||
Normal mode based flexible fitting of high-resolution structure into low-resolution experimental data from cryo-EM. | Q30966235 | ||
High resolution protein localization using soft X-ray microscopy | Q30983090 | ||
Fourier amplitude decay of electron cryomicroscopic images of single particles and effects on structure determination | Q30989511 | ||
Classification of single-projection reconstructions for cryo-electron microscopy data of icosahedral viruses. | Q30990881 | ||
The effect of overabundant projection directions on 3D reconstruction algorithms | Q30997325 | ||
Automated determination of parameters describing power spectra of micrograph images in electron microscopy | Q31029428 | ||
Automated identification of filaments in cryoelectron microscopy images | Q31031441 | ||
Automated microscopy for electron tomography | Q31043024 | ||
Processing images of helical structures: a new twist | Q31043041 | ||
An improved strategy for automated electron microscopic tomography | Q31078358 | ||
Flexible fitting in 3D-EM with incomplete data on superfamily variability | Q31096146 | ||
E-MSD: the European Bioinformatics Institute Macromolecular Structure Database | Q31125431 | ||
Three dimensional reconstructions of spherical viruses by fourier synthesis from electron micrographs | Q44044627 | ||
Procedures for three-dimensional reconstruction of spherical viruses by Fourier synthesis from electron micrographs | Q44837974 | ||
Three-dimensional distributions of elements in biological samples by energy-filtered electron tomography. | Q44953369 | ||
Electron cryomicroscopy and bioinformatics suggest protein fold models for rice dwarf virus | Q45735533 | ||
Conical tomography II: A method for the study of cellular organelles in thin sections. | Q45936535 | ||
Contrast transfer for frozen-hydrated specimens: determination from pairs of defocused images | Q46316410 | ||
The orthogonal tilt reconstruction method: an approach to generating single-class volumes with no missing cone for ab initio reconstruction of asymmetric particles | Q46645791 | ||
Correction of autofocusing errors due to specimen tilt for automated electron tomography | Q47727877 | ||
A multiresolution approach to orientation assignment in 3D electron microscopy of single particles | Q47729272 | ||
FindEM--a fast, efficient program for automatic selection of particles from electron micrographs | Q47815374 | ||
Flexible multi-scale fitting of atomic structures into low-resolution electron density maps with elastic network normal mode analysis. | Q47919295 | ||
Normalizing projection images: a study of image normalizing procedures for single particle three-dimensional electron microscopy. | Q48559268 | ||
On the Euclidean distance of images | Q50376453 | ||
Experimental verification of conformational variation of human fatty acid synthase as predicted by normal mode analysis. | Q51038029 | ||
3-d reconstruction of 2-D crystals in real space. | Q51613936 | ||
SPI-EM: towards a tool for predicting CATH superfamilies in 3D-EM maps. | Q51634915 | ||
Three-dimensional reconstruction with contrast transfer function correction from energy-filtered cryoelectron micrographs: procedure and application to the 70S Escherichia coli ribosome. | Q51648419 | ||
On the nature of 2D crystal unbending. | Q51932873 | ||
The contrast-imaging function for tilted specimens. | Q51932983 | ||
Estimation of variance in single-particle reconstruction using the bootstrap technique. | Q51948353 | ||
Spline-based image-to-volume registration for three-dimensional electron microscopy. | Q51974361 | ||
Conical tomography of freeze-fracture replicas: a method for the study of integral membrane proteins inserted in phospholipid bilayers. | Q51981002 | ||
Unified 3-D structure and projection orientation refinement using quasi-Newton algorithm. | Q51981005 | ||
On the three-dimensional reconstruction of icosahedral particles. | Q52007278 | ||
Automatic CTF correction for single particles based upon multivariate statistical analysis of individual power spectra. | Q52015351 | ||
A method for estimating the CTF in electron microscopy based on ARMA models and parameter adjustment. | Q52021207 | ||
Three-dimensional spectral signal-to-noise ratio for a class of reconstruction algorithms. | Q52035309 | ||
Quantitative fitting of atomic models into observed densities derived by electron microscopy. | Q52216421 | ||
A maximum-likelihood approach to single-particle image refinement. | Q52234622 | ||
3D reconstruction in electron microscopy using ART with smooth spherically symmetric volume elements (blobs). | Q52244656 | ||
Three-dimensional reconstruction from reduced sets of very noisy images acquired following a single-axis tilt schema: application of a new three-dimensional reconstruction algorithm and objective comparison with weighted backprojection. | Q52250501 | ||
Helical processing using PHOELIX. | Q52319129 | ||
Double-tilt electron tomography. | Q52328661 | ||
Three-dimensional reconstruction of single particles embedded in ice | Q52430878 | ||
Angular reconstitution: a posteriori assignment of projection directions for 3D reconstruction. | Q52606936 | ||
An algorithm for straightening images of curved filamentous structures. | Q52651351 | ||
Use of multivariate statistics in analysing the images of biological macromolecules | Q52745385 | ||
Limitations to significant information in biological electron microscopy as a result of radiation damage | Q52999916 | ||
Arrangement of tRNAs in pre- and posttranslocational ribosomes revealed by electron cryomicroscopy. | Q53001846 | ||
Electron tomographic analysis of frozen-hydrated tissue sections. | Q53674393 | ||
Disentangling conformational states of macromolecules in 3D-EM through likelihood optimization. | Q54449974 | ||
Electron microscopy of frozen water and aqueous solutions | Q56595357 | ||
The correlation averaging of a regularly arranged bacterial cell envelope protein | Q60191226 | ||
Molecular structure determination by electron microscopy of unstained crystalline specimens | Q67427358 | ||
Electron Diffraction of Frozen, Hydrated Protein Crystals | Q68920343 | ||
Electron microscopy of frozen hydrated specimens: preparation and characteristics | Q69576100 | ||
TOM software toolbox: acquisition and analysis for electron tomography. | Q31148432 | ||
Automated acquisition of cryo-electron micrographs for single particle reconstruction on an FEI Tecnai electron microscope | Q31157230 | ||
Multiphase method for automatic alignment of transmission electron microscope images using markers. | Q31916169 | ||
Cryo-negative staining | Q32048514 | ||
Three-dimensional structure of bovine NADH:ubiquinone oxidoreductase (complex I) at 22 A in ice. | Q32065329 | ||
Automatic alignment of transmission electron microscope tilt series without fiducial markers. | Q32126710 | ||
Radiation damage in the TEM and SEM. | Q33202505 | ||
Direct sub-angstrom imaging of a crystal lattice | Q33206931 | ||
Maximum-likelihood multi-reference refinement for electron microscopy images | Q33213664 | ||
ACE: automated CTF estimation | Q33216460 | ||
A public software for energy filtering transmission electron tomography (EFTET-J): application to the study of granular inclusions in bacteria from Riftia pachyptila. | Q33217954 | ||
Effects of nuclease and protease digestion on the ultrastructure of Paramecium basal bodies | Q33298915 | ||
The cell in absence of aggregation artifacts | Q33334767 | ||
Reconstruction principles of icosahedral virus structure determination using electron cryomicroscopy | Q33933606 | ||
Single-particle electron cryo-microscopy: towards atomic resolution. | Q33936480 | ||
Structure determination of clathrin coats to subnanometer resolution by single particle cryo-electron microscopy | Q34020359 | ||
Recent developments in cryo-electron microscopy reconstruction of single particles | Q34066562 | ||
Macromolecular electron microscopy in the era of structural genomics | Q34104540 | ||
A short reader's guide to 3D tomographic reconstruction | Q34118170 | ||
Structure analysis of soluble proteins using electron crystallography | Q34133187 | ||
Cryo-negative staining reduces electron-beam sensitivity of vitrified biological particles. | Q34148333 | ||
Advances in structure analysis using small-angle scattering in solution | Q34162462 | ||
Three-dimensional reconstruction from a single-exposure, random conical tilt series applied to the 50S ribosomal subunit of Escherichia coli | Q34173266 | ||
A new resolution criterion based on spectral signal-to-noise ratios | Q34186788 | ||
Review: automatic particle detection in electron microscopy | Q34319034 | ||
Identification of macromolecular complexes in cryoelectron tomograms of phantom cells | Q34392410 | ||
Spectral signal-to-noise ratio and resolution assessment of 3D reconstructions | Q34623563 | ||
Single-particle imaging of macromolecules by cryo-electron microscopy | Q34623606 | ||
Reconstruction of three dimensional structures from electron micrographs | Q34682297 | ||
From words to literature in structural proteomics | Q35084576 | ||
Complementary approaches to structure determination of icosahedral viruses | Q35564019 | ||
Electron microscopy in cell biology: integrating structure and function | Q35572321 | ||
Three-dimensional electron microscopy at molecular resolution | Q35771560 | ||
Toward detecting and identifying macromolecules in a cellular context: template matching applied to electron tomograms | Q35839251 | ||
P433 | issue | 8 | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | 995-1013 | |
P577 | publication date | 2007-07-05 | |
P1433 | published in | European Biophysics Journal | Q5412316 |
P1476 | title | 3D electron microscopy of biological nanomachines: principles and applications | |
P478 | volume | 36 |
Q57378457 | Cryogenic Transmission Electron Microscopy for Direct Observation of Polymer and Small-Molecule Materials and Structures in Solution |
Q37271722 | Molecular structure of low density lipoprotein: current status and future challenges |
Q37876829 | Scanning force microscopy as applied to conformational studies in macromolecular research. |
Q27649544 | The subnanometer resolution structure of the glutamate synthase 1.2-MDa hexamer by cryoelectron microscopy and its oligomerization behavior in solution: functional implications |
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