| scholarly article | Q13442814 |
| P2093 | author name string | Grigorieff N | |
| P2860 | cites work | EMAN: semiautomated software for high-resolution single-particle reconstructions | Q27860772 |
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 117-25 | |
| P577 | publication date | 2007-01-01 | |
| P1433 | published in | Journal of Structural Biology | Q3186947 |
| P1476 | title | FREALIGN: high-resolution refinement of single particle structures | |
| P478 | volume | 157 |
| Q27700746 | 2.2 Å resolution cryo-EM structure of β-galactosidase in complex with a cell-permeant inhibitor |
| Q41608772 | 3-D Structures of Macromolecules Using Single-Particle Analysis in EMAN |
| Q24615465 | 3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry |
| Q30374360 | 3D Structural Fluctuation of IgG1 Antibody Revealed by Individual Particle Electron Tomography. |
| Q36870621 | 3D electron microscopy of biological nanomachines: principles and applications. |
| Q35859527 | A Bayesian View on Cryo-EM Structure Determination |
| Q36040978 | A Bayesian adaptive basis algorithm for single particle reconstruction |
| Q37606178 | A conformational switch in bacteriophage p22 portal protein primes genome injection |
| Q38710948 | A facile method for isolation of recombinant human apolipoprotein A-I from E. coli |
| Q40083989 | A mechanism of viral immune evasion revealed by cryo-EM analysis of the TAP transporter |
| Q90695741 | A microtubule RELION-based pipeline for cryo-EM image processing |
| Q36276483 | A multivalent adsorption apparatus explains the broad host range of phage phi92: a comprehensive genomic and structural analysis |
| Q36253415 | A new protocol to accurately determine microtubule lattice seam location |
| Q27680922 | A new topology of the HK97-like fold revealed in Bordetella bacteriophage by cryoEM at 3.5 Å resolution |
| Q41619329 | A novel approximation method of CTF amplitude correction for 3D single particle reconstruction |
| Q90035773 | A particle-filter framework for robust cryo-EM 3D reconstruction |
| Q27322872 | A primer to single-particle cryo-electron microscopy |
| Q37643700 | Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2. |
| Q38696835 | Addressing preferred specimen orientation in single-particle cryo-EM through tilting. |
| Q36535456 | Adenovirus serotype 5 hexon is critical for virus infection of hepatocytes in vivo |
| Q27680006 | Allosteric Regulation of DNA Cleavage and Sequence-Specificity through Run-On Oligomerization |
| Q27679233 | Allosteric mechanism of water-channel gating by Ca2+–calmodulin |
| Q38606592 | An adaptation of the Wiener filter suitable for analyzing images of isolated single particles |
| Q48031186 | An antimicrobial peptide that inhibits translation by trapping release factors on the ribosome. |
| Q27324472 | An intrinsically disordered region of the adenovirus capsid is implicated in neutralization by human alpha defensin 5 |
| Q29614288 | Appion: an integrated, database-driven pipeline to facilitate EM image processing |
| Q33633412 | Application of symmetry adapted function method for three-dimensional reconstruction of octahedral biological macromolecules |
| Q41607512 | Architecture of mammalian respiratory complex I. |
| Q36122751 | Arrangement of subunits in intact mammalian mitochondrial ATP synthase determined by cryo-EM. |
| Q44749348 | Assessing the mechanisms of cholesteryl ester transfer protein inhibitors. |
| Q45045809 | Atomic model for the membrane-embedded VO motor of a eukaryotic V-ATPase |
| Q27703101 | Atomic model of a nonenveloped virus reveals pH sensors for a coordinated process of cell entry |
| Q27666313 | Atomic model of an infectious rotavirus particle |
| Q34572922 | Atomic modeling of cryo-electron microscopy reconstructions – Joint refinement of model and imaging parameters |
| Q36973854 | Atomic resolution cryo electron microscopy of macromolecular complexes |
| Q27676980 | Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography |
| Q47388913 | Automated tracing of helical assemblies from electron cryo-micrographs |
| Q33708402 | Automation in single-particle electron microscopy connecting the pieces. |
| Q42610211 | Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm |
| Q35878913 | Beam-induced motion of vitrified specimen on holey carbon film |
| Q27660311 | Bluetongue virus coat protein VP2 contains sialic acid-binding domains, and VP5 resembles enveloped virus fusion proteins. |
| Q104073430 | CD147-spike protein is a novel route for SARS-CoV-2 infection to host cells |
| Q34683137 | Calsyntenin-3 molecular architecture and interaction with neurexin 1α. |
| Q35825769 | Capsomer dynamics and stabilization in the T = 12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM |
| Q90782966 | Clustering cryo-EM images of helical protein polymers for helical reconstructions |
| Q41610747 | Coagulation factor binding orientation and dimerization may influence infectivity of adenovirus-coagulation factor complexes. |
| Q27679409 | Computational Design of Self-Assembling Protein Nanomaterials with Atomic Level Accuracy |
| Q28292908 | Conformational switching of the 26S proteasome enables substrate degradation |
| Q35173188 | Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins. |
| Q33743691 | Contribution of the global subunit structure and stargazin on the maturation of AMPA receptors |
| Q30008863 | Coordinated autoinhibition of F-BAR domain membrane binding and WASp activation by Nervous Wreck |
| Q27331094 | Coordinated movement of cytoplasmic and transmembrane domains of RyR1 upon gating |
| Q37796337 | Correcting for the Ewald Sphere in High-Resolution Single-Particle Reconstructions |
| Q36895817 | Cross-validation in cryo-EM–based structural modeling |
| Q26774271 | Cryo electron microscopy to determine the structure of macromolecular complexes |
| Q34555630 | Cryo-EM Structure of the Open Human Ether-à-go-go-Related K+ Channel hERG. |
| Q30843913 | Cryo-EM image alignment based on nonuniform fast Fourier transform |
| Q57178721 | Cryo-EM in drug discovery: achievements, limitations and prospects |
| Q35023140 | Cryo-EM of macromolecular assemblies at near-atomic resolution |
| Q34558723 | Cryo-EM reconstruction of the Cafeteria roenbergensis virus capsid suggests novel assembly pathway for giant viruses |
| Q37007395 | Cryo-EM reveals a novel octameric integrase structure for betaretroviral intasome function. |
| Q98286425 | Cryo-EM structure of VASH1-SVBP bound to microtubules |
| Q64097848 | Cryo-EM structure of phosphodiesterase 6 reveals insights into the allosteric regulation of type I phosphodiesterases |
| Q47132439 | Cryo-EM structure of the bifunctional secretin complex of Thermus thermophilus |
| Q97545812 | Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain |
| Q41872322 | Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions. |
| Q33900890 | Cryo-EM structures and atomic model of the HIV-1 strand transfer complex intasome |
| Q33800540 | Cryo-EM structures of human RAD51 recombinase filaments during catalysis of DNA-strand exchange |
| Q35132520 | Cryo-EM techniques to resolve the structure of HSV-1 capsid-associated components |
| Q35638563 | Cryo-EM: A Unique Tool for the Visualization of Macromolecular Complexity |
| Q27680656 | Cryo-Electron Microscopy Reconstruction Shows Poliovirus 135S Particles Poised for Membrane Interaction and RNA Release |
| Q28077127 | Cryo-electron Microscopy Analysis of Structurally Heterogeneous Macromolecular Complexes |
| Q39182422 | Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State |
| Q38875362 | Cryo-electron microscopy and cryo-electron tomography of nanoparticles |
| Q39848879 | Cryo-electron microscopy structure of adenovirus type 2 temperature-sensitive mutant 1 reveals insight into the cell entry defect |
| Q39804477 | Cryo-electron microscopy structure of an adenovirus-integrin complex indicates conformational changes in both penton base and integrin |
| Q30854732 | CryoEM Structure Refinement by Integrating NMR Chemical Shifts with Molecular Dynamics Simulations. |
| Q27678761 | CryoEM and Molecular Dynamics of the Circadian KaiB–KaiC Complex Indicates That KaiB Monomers Interact with KaiC and Block ATP Binding Clefts |
| Q27335395 | CryoEM visualization of an adenovirus capsid-incorporated HIV antigen |
| Q36620780 | Cryoelectron Microscopy Analysis of Small Heat Shock Protein 16.5 (Hsp16.5) Complexes with T4 Lysozyme Reveals the Structural Basis of Multimode Binding |
| Q89000628 | Current approaches for the fitting and refinement of atomic models into cryo-EM maps using CCP-EM |
| Q43010634 | DNA poised for release in bacteriophage phi29. |
| Q58571289 | De novo design of self-assembling helical protein filaments |
| Q38983076 | Determination of the ribosome structure to a resolution of 2.5 Å by single-particle cryo-EM. |
| Q38311694 | Differential accessibility of a rotavirus VP6 epitope in trimers comprising type I, II, or III channels as revealed by binding of a human rotavirus VP6-specific antibody |
| Q30887503 | Do's and don'ts of cryo-electron microscopy: a primer on sample preparation and high quality data collection for macromolecular 3D reconstruction |
| Q42685144 | Domain structure and conformational changes in rat KV2.1 ion channel. |
| Q30378954 | EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps. |
| Q64886147 | Effects of α-tubulin acetylation on microtubule structure and stability. |
| Q27679952 | Electron microscopy analysis of a disaccharide analog complex reveals receptor interactions of adeno-associated virus |
| Q34223995 | Fabs enable single particle cryoEM studies of small proteins |
| Q36694086 | Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site |
| Q36116315 | Frealign: An Exploratory Tool for Single-Particle Cryo-EM. |
| Q41043590 | Frealix: model-based refinement of helical filament structures from electron micrographs |
| Q41618674 | GPU-enabled FREALIGN: accelerating single particle 3D reconstruction and refinement in Fourier space on graphics processors |
| Q41603517 | Gctf: Real-time CTF determination and correction |
| Q47233096 | Geometric Defects and Icosahedral Viruses |
| Q42791545 | HCV IRES manipulates the ribosome to promote the switch from translation initiation to elongation |
| Q30385130 | High resolution single particle refinement in EMAN2.1. |
| Q27683920 | High-Resolution Microtubule Structures Reveal the Structural Transitions in αβ-Tubulin upon GTP Hydrolysis |
| Q27646306 | High-resolution Electron Microscopy of Helical Specimens: A Fresh Look at Tobacco Mosaic Virus |
| Q38750904 | High-resolution Single Particle Analysis from Electron Cryo-microscopy Images Using SPHIRE |
| Q36392578 | High-resolution cryo-EM proteasome structures in drug development. |
| Q42103385 | High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy |
| Q35247680 | High-resolution structures of kinesin on microtubules provide a basis for nucleotide-gated force-generation |
| Q41610914 | Hsc70-induced changes in clathrin-auxilin cage structure suggest a role for clathrin light chains in cage disassembly. |
| Q36554764 | Human TFIID binds to core promoter DNA in a reorganized structural state |
| Q27310005 | IPET and FETR: Experimental Approach for Studying Molecular Structure Dynamics by Cryo-Electron Tomography of a Single-Molecule Structure |
| Q90212251 | IgG Antibody 3D Structures and Dynamics |
| Q91452705 | In situ structure determination at nanometer resolution using TYGRESS |
| Q40404242 | In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus |
| Q33619244 | Insight into the mechanisms of adenovirus capsid disassembly from studies of defensin neutralization |
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| Q36511911 | Interfacing Microfluidics with Negative Stain Transmission Electron Microscopy |
| Q27680525 | Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation |
| Q47983792 | Katanin spiral and ring structures shed light on power stroke for microtubule severing |
| Q57294680 | Kinesin-binding-triggered conformation switching of microtubules contributes to polarized transport |
| Q36442558 | Ligand-induced architecture of the leptin receptor signaling complex |
| Q30352230 | Likelihood-based classification of cryo-EM images using FREALIGN |
| Q37010480 | Limiting factors in atomic resolution cryo electron microscopy: No simple tricks |
| Q41893235 | Liposomes on a Streptavidin Crystal: A System to Study Membrane Proteins by Cryo-EM |
| Q36055614 | Low cost, high performance GPU computing solution for atomic resolution cryoEM single-particle reconstruction |
| Q30947722 | Low cost, high performance processing of single particle cryo-electron microscopy data in the cloud |
| Q38018577 | Macromolecular structure modeling from 3D EM using VolRover 2.0 |
| Q28728451 | Maturation in action: CryoEM study of a viral capsid caught during expansion |
| Q30557415 | Maximizing the potential of electron cryomicroscopy data collected using direct detectors. |
| Q38858803 | Mechanism of action and capsid-stabilizing properties of VHHs with an in vitro antipolioviral activity |
| Q24564109 | Mechanism of gate opening in the 20S proteasome by the proteasomal ATPases |
| Q57091691 | Miniaturized Sample Preparation for Transmission Electron Microscopy |
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| Q39398105 | Molecular Architecture of Contactin-associated Protein-like 2 (CNTNAP2) and Its Interaction with Contactin 2 (CNTN2). |
| Q27682053 | Molecular Mechanism of Antibody-Mediated Activation of β-galactosidase |
| Q37138839 | Molecular electron microscopy: state of the art and current challenges |
| Q27655706 | Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM |
| Q33580197 | Molecular structure and dimeric organization of the Notch extracellular domain as revealed by electron microscopy |
| Q36534257 | Monolayer purification: a rapid method for isolating protein complexes for single-particle electron microscopy |
| Q34395191 | Morphology and structure of lipoproteins revealed by an optimized negative-staining protocol of electron microscopy |
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| Q36433748 | Movies of ice-embedded particles enhance resolution in electron cryo-microscopy |
| Q30419661 | Multimodal microtubule binding by the Ndc80 kinetochore complex |
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| Q37844745 | Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopy |
| Q36890886 | Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction |
| Q40076561 | Near-atomic-resolution cryo-EM analysis of the Salmonella T3S injectisome basal body |
| Q58563641 | New tools for automated high-resolution cryo-EM structure determination in RELION-3 |
| Q103805780 | Non-uniform refinement: adaptive regularization improves single-particle cryo-EM reconstruction |
| Q47585613 | Observation of Bacteriophage Ultrastructure by Cryo-electron Microscopy |
| Q33703047 | Obtaining high-resolution images of biological macromolecules by using a cryo-electron microscope with a liquid-helium cooled stage |
| Q41143645 | Optimal noise reduction in 3D reconstructions of single particles using a volume-normalized filter |
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| Q34785823 | Peering down the barrel of a bacteriophage portal: the genome packaging and release valve in p22 |
| Q30532713 | Peptide-Conjugation Induced Conformational Changes in Human IgG1 Observed by Optimized Negative-Staining and Individual-Particle Electron Tomography |
| Q27680442 | Prefusion structure of trimeric HIV-1 envelope glycoprotein determined by cryo-electron microscopy |
| Q47588689 | Preribosomes escaping from the nucleus are caught during translation by cytoplasmic quality control. |
| Q35261056 | Primed for Discovery: Atomic-Resolution Cryo-EM Structure of a Reovirus Entry Intermediate |
| Q90440963 | Principles for enhancing virus capsid capacity and stability from a thermophilic virus capsid structure |
| Q36567286 | Principles of cryo-EM single-particle image processing |
| Q89405929 | Processing apoferritin with the Appion pipeline |
| Q27675382 | Protein Secondary Structure Determination by Constrained Single-Particle Cryo-Electron Tomography |
| Q47107077 | Quenching protein dynamics interferes with HIV capsid maturation. |
| Q90576408 | Real-time cryo-electron microscopy data preprocessing with Warp |
| Q39000382 | ResLog plots as an empirical metric of the quality of cryo-EM reconstructions. |
| Q41615171 | Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates |
| Q30364626 | Robust evaluation of 3D electron cryomicroscopy data using tilt-pairs |
| Q36913704 | Robust w-Estimators for Cryo-EM Class Means |
| Q41612818 | SIMPLE: Software for ab initio reconstruction of heterogeneous single-particles |
| Q30830127 | Schizosaccharomyces pombe kinesin-5 switches direction using a steric blocking mechanism |
| Q64931077 | Separating the effects of nucleotide and EB binding on microtubule structure. |
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| Q37401754 | Single-Particle Refinement and Variability Analysis in EMAN2.1. |
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| Q38649482 | Single-particle cryo-electron microscopy of macromolecular complexes |
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