Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm

scientific article published on 20 January 2013

Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1007/S12192-012-0398-3
P2888exact matchhttps://scigraph.springernature.com/pub.10.1007/s12192-012-0398-3
P932PMC publication ID3682024
P698PubMed publication ID23334891
P5875ResearchGate publication ID234702765

P50authorMyunghee KimQ43166216
Hironori KaminakaQ59564328
P2093author name stringYutaka Sonoda
Ryozo Imai
Kentaro Sasaki
P2860cites workPleiotropic roles of cold shock domain proteins in plantsQ35970426
Y-box binding protein 1 and RNase UK114 mediate monocyte chemoattractant protein 1 mRNA stability in vascular smooth muscle cellsQ36197071
Arabidopsis cold shock domain proteins: relationships to floral and silique developmentQ37119318
A homolog of human ski-interacting protein in rice positively regulates cell viability and stress toleranceQ37158969
Cold shock domain protein 3 regulates freezing tolerance in Arabidopsis thaliana.Q37358130
RNA remodeling and gene regulation by cold shock proteinsQ37806516
A cold-regulated nucleic acid-binding protein of winter wheat shares a domain with bacterial cold shock proteinsQ39121796
LOS2, a genetic locus required for cold-responsive gene transcription encodes a bi-functional enolaseQ39647285
Use of fluorescent protein tags to study nuclear organization of the spliceosomal machinery in transiently transformed living plant cellsQ41079393
Some like it cold: response of microorganisms to cold shockQ41224215
bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection.Q41875159
Arabidopsis COLD SHOCK DOMAIN PROTEIN2 is a RNA chaperone that is regulated by cold and developmental signals.Q42635622
A DEAD box RNA helicase is essential for mRNA export and important for development and stress responses in ArabidopsisQ45187138
A superfamily of proteins that contain the cold-shock domainQ47747869
CONSTANS and the CCAAT box binding complex share a functionally important domain and interact to regulate flowering of ArabidopsisQ48083169
Arabidopsis CONSTANS-LIKE3 is a positive regulator of red light signaling and root growth.Q50745674
Arabidopsis nucleolin affects plant development and patterning.Q51991351
Arabidopsis decapping 5 is required for mRNA decapping, P-body formation, and translational repression during postembryonic development.Q54457563
Nuclear localization and in vivo dynamics of a plant-specific serine/arginine-rich protein.Q54563787
CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone.Q54572346
Localization of poly(A)-binding protein 2 (PABP2) in nuclear speckles is independent of import into the nucleus and requires binding to poly(A) RNAQ73821966
Conservation of the cold shock domain protein family in plantsQ78799847
A role for circadian evening elements in cold-regulated gene expression in ArabidopsisQ84146201
Nuclear speckles: a model for nuclear organellesQ22121993
The product of an oculopharyngeal muscular dystrophy gene, poly(A)-binding protein 2, interacts with SKIP and stimulates muscle-specific gene expressionQ24291254
Characterization of the cDNA encoding a protein binding to the major histocompatibility complex class II Y boxQ24297065
RNA-associated protein 55 (RAP55) localizes to mRNA processing bodies and stress granulesQ24305036
RAP55, a cytoplasmic mRNP component, represses translation in Xenopus oocytesQ24310395
Small nucleolar RNA-guided post-transcriptional modification of cellular RNAsQ24535572
The DEAD box RNA helicase family in Arabidopsis thalianaQ24548436
Selective blockade of microRNA processing by Lin28Q24609864
Conservation of the heterochronic regulator Lin-28, its developmental expression and microRNA complementary sitesQ28178157
LIP19, a basic region leucine zipper protein, is a Fos-like molecular switch in the cold signaling of rice plantsQ28264232
Alternative splicing regulation by interaction of phosphatase PP2Cgamma with nucleic acid-binding protein YB-1Q28306523
Interactions of nucleolin and ribosomal protein L26 (RPL26) in translational control of human p53 mRNAQ28384376
GATEWAY vectors for Agrobacterium-mediated plant transformationQ29615003
Acquirement of cold sensitivity by quadruple deletion of the cspA family and its suppression by PNPase S1 domain in Escherichia coliQ30168294
Non-invasive quantitative detection and applications of non-toxic, S65T-type green fluorescent protein in living plantsQ30734147
Sugar-inducible expression of the nucleolin-1 gene of Arabidopsis thaliana and its role in ribosome synthesis, growth and developmentQ33343711
A putative novel transcription factor, AtSKIP, is involved in abscisic acid signalling and confers salt and osmotic tolerance in ArabidopsisQ33504850
Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functionsQ33564752
CspI, the ninth member of the CspA family of Escherichia coli, is induced upon cold shockQ33991400
Poly(A) tail length control is caused by termination of processive synthesis.Q34059279
mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation.Q34067754
The major mRNA-associated protein YB-1 is a potent 5' cap-dependent mRNA stabilizerQ34092756
Cbf5p, the putative pseudouridine synthase of H/ACA-type snoRNPs, can form a complex with Gar1p and Nop10p in absence of Nhp2p and box H/ACA snoRNAs.Q34366130
The pleiotropic functions of the Y-box-binding protein, YB-1.Q35158110
Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasmQ35583606
Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in ArabidopsisQ35613446
Cold shock domain proteins and glycine-rich RNA-binding proteins from Arabidopsis thaliana can promote the cold adaptation process in Escherichia coliQ35646795
Recent developments in bacterial cold-shock responseQ35761291
P2507corrigendum / erratumErratum to: Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasmQ43144737
P433issue4
P921main subjectRNA analysisQ95588220
P304page(s)517-525
P577publication date2013-01-20
P1433published inCell Stress & ChaperonesQ13458649
P1476titleInteractome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm
P478volume18

Reverse relations

cites work (P2860)
Q35999715A Cold-Inducible DEAD-Box RNA Helicase from Arabidopsis thaliana Regulates Plant Growth and Development under Low Temperature
Q52684222Abiotic Stresses Modulate Landscape of Poplar Transcriptome via Alternative Splicing, Differential Intron Retention, and Isoform Ratio Switching.
Q36215425An RNA chaperone, AtCSP2, negatively regulates salt stress tolerance
Q46192284Arabidopsis COLD SHOCK DOMAIN PROTEIN 2 is a negative regulator of cold acclimation
Q37313668COLD SHOCK DOMAIN PROTEIN 3 is involved in salt and drought stress tolerance in Arabidopsis.
Q36891344Characterization of Two Dinoflagellate Cold Shock Domain Proteins
Q26864862Composition and function of P bodies in Arabidopsis thaliana
Q41700180Detection of genomic loci associated with environmental variables using generalized linear mixed models
Q50334913Function of Plant DExD/H-Box RNA Helicases Associated with Ribosomal RNA Biogenesis.
Q50546110The DEAD-Box RNA Helicase AtRH7/PRH75 Participates in Pre-rRNA Processing, Plant Development and Cold Tolerance in Arabidopsis.
Q35855223cDNA Library Screening Identifies Protein Interactors Potentially Involved in Non-Telomeric Roles of Arabidopsis Telomerase

Q43144737Erratum to: Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasmmain subjectP921

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