scholarly article | Q13442814 |
P819 | ADS bibcode | 2000PNAS...9713985K |
P356 | DOI | 10.1073/PNAS.97.25.13985 |
P932 | PMC publication ID | 17687 |
P698 | PubMed publication ID | 11106401 |
P5875 | ResearchGate publication ID | 12222461 |
P2093 | author name string | P J Green | |
J P Kastenmayer | |||
P2860 | cites work | The DEAD box RNA helicase family in Arabidopsis thaliana | Q24548436 |
The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site | Q24595513 | ||
Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively | Q27933347 | ||
The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex | Q27934144 | ||
An essential yeast gene with homology to the exonuclease-encoding XRN1/KEM1 gene also encodes a protein with exoribonuclease activity | Q27935477 | ||
Processing of the precursors to small nucleolar RNAs and rRNAs requires common components | Q27940213 | ||
A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates | Q28304600 | ||
Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript | Q29615273 | ||
Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA | Q29620080 | ||
Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure | Q29620098 | ||
A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation | Q29620357 | ||
Post-transcriptional gene-silencing: RNAs on the attack or on the defense? | Q33936673 | ||
Active-site mutations in the Xrn1p exoribonuclease of Saccharomyces cerevisiae reveal a specific role in meiosis | Q33959116 | ||
Fragments of the internal transcribed spacer 1 of pre-rRNA accumulate in Saccharomyces cerevisiae lacking 5'----3' exoribonuclease 1 | Q36164476 | ||
RNS2: a senescence-associated RNase of Arabidopsis that diverged from the S-RNases before speciation | Q36338232 | ||
Regulation and intracellular localization of Saccharomyces cerevisiae strand exchange protein 1 (Sep1/Xrn1/Kem1), a multifunctional exonuclease | Q36551043 | ||
Degradation of the soybean ribulose-1,5-bisphosphate carboxylase small-subunit mRNA, SRS4, initiates with endonucleolytic cleavage | Q36556159 | ||
Genes galore: a summary of methods for accessing results from large-scale partial sequencing of anonymous Arabidopsis cDNA clones | Q36714766 | ||
Arabidopsis thaliana poly (A) binding protein 2 (PAB2) functions in yeast translational and mRNA decay processes | Q38311471 | ||
Structural modifications of RNA influence the 5' exoribonucleolytic hydrolysis by XRN1 and HKE1 of Saccharomyces cerevisiae | Q38344801 | ||
Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activities | Q39574871 | ||
Silencing of beta-1,3-glucanase genes in tobacco correlates with an increased abundance of RNA degradation intermediates | Q39725659 | ||
The rate-limiting step in yeast PGK1 mRNA degradation is an endonucleolytic cleavage in the 3'-terminal part of the coding region | Q40655360 | ||
Current perspectives on mRNA stability in plants: multiple levels and mechanisms of control. | Q40793005 | ||
Protein import into the nucleus: an integrated view | Q41020952 | ||
RNA turnover: the helicase story unwinds | Q41110719 | ||
Characterization of Post-Transcriptionally Suppressed Transgene Expression That Confers Resistance to Tobacco Etch Virus Infection in Tobacco. | Q44855907 | ||
Identification and developmental expression of a 5'-3' exoribonuclease from Drosophila melanogaster | Q47959827 | ||
Cloning vectors for the expression of green fluorescent protein fusion proteins in transgenic plants | Q48001365 | ||
RNA-mediated RNA degradation and chalcone synthase A silencing in petunia | Q48052408 | ||
Requirement of S. pombe exonuclease II, a homologue of S. cerevisiae Sep1, for normal mitotic growth and viability | Q48060807 | ||
Nuclear localization signal(s) required for nuclear targeting of the maize regulatory protein Opaque-2 | Q67507012 | ||
Vectors for constitutive and inducible gene expression in yeast | Q70120830 | ||
Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast | Q71738227 | ||
Oat phytochrome A mRNA degradation appears to occur via two distinct pathways | Q72689300 | ||
Discrete domains mediate the light-responsive nuclear and cytoplasmic localization of Arabidopsis COP1 | Q74595680 | ||
P433 | issue | 25 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | cytoplasm | Q79899 |
P304 | page(s) | 13985-13990 | |
P577 | publication date | 2000-12-01 | |
P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
P1476 | title | Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasm | |
P478 | volume | 97 |
Q58056974 | 3'-Phosphoadenosine 5'-Phosphate Accumulation Delays the Circadian System |
Q38437684 | 5' to 3' mRNA Decay Contributes to the Regulation of Arabidopsis Seed Germination by Dormancy. |
Q27487031 | A Viral Noncoding RNA Generated by cis-Element-Mediated Protection against 5'->3' RNA Decay Represses both Cap-Independent and Cap-Dependent Translation |
Q91932047 | A genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing |
Q27933414 | A role for KEM1 at the START of the cell cycle in Saccharomyces cerevisiae |
Q39042341 | Activity and roles of Arabidopsis thaliana XRN family exoribonucleases in noncoding RNA pathways |
Q60130334 | Analysis of XRN Orthologs by Complementation of Yeast Mutants and Localization of XRN–GFP Fusion Proteins |
Q46907096 | Arabidopsis FIERY1, XRN2, and XRN3 are endogenous RNA silencing suppressors |
Q47554042 | Arabidopsis mRNA decay landscape arises from specialized RNA decay substrates, decapping-mediated feedback, and redundancy. |
Q34020217 | Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA. |
Q90396368 | AtXRN4 Affects the Turnover of Chosen miRNA*s in Arabidopsis |
Q60950939 | Beyond transcription factors: roles of mRNA decay in regulating gene expression in plants |
Q26824566 | Biogenesis, turnover, and mode of action of plant microRNAs |
Q37371527 | Comparative analysis of editosome proteins in trypanosomatids |
Q39317738 | Comparison of preribosomal RNA processing pathways in yeast, plant and human cells - focus on coordinated action of endo- and exoribonucleases. |
Q33344053 | Components of the Arabidopsis mRNA decapping complex are required for early seedling development |
Q34115546 | Conserved RNaseII domain protein functions in cytoplasmic mRNA decay and suppresses Arabidopsis decapping mutant phenotypes |
Q35813310 | Cooperation of endo- and exoribonucleases in chloroplast mRNA turnover |
Q36783661 | Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants |
Q39987352 | Degradation of initiator tRNAMet by Xrn1/2 via its accumulation in the nucleus of heat-treated HeLa cells |
Q33988634 | Degradation of the unstable EP1 mRNA in Trypanosoma brucei involves initial destruction of the 3'-untranslated region |
Q34999022 | ETHYLENE-INSENSITIVE5 encodes a 5'-->3' exoribonuclease required for regulation of the EIN3-targeting F-box proteins EBF1/2. |
Q64238782 | Emerging Roles of LSM Complexes in Posttranscriptional Regulation of Plant Response to Abiotic Stress |
Q36925468 | Ethylene signaling: new levels of complexity and regulation |
Q38995678 | Evidence for a SAL1-PAP chloroplast retrograde pathway that functions in drought and high light signaling in Arabidopsis |
Q38338115 | Evidence that XRN4, an Arabidopsis homolog of exoribonuclease XRN1, preferentially impacts transcripts with certain sequences or in particular functional categories |
Q24316889 | Evolutionary conservation supports ancient origin for Nudt16, a nuclear-localized, RNA-binding, RNA-decapping enzyme |
Q24555225 | Exoribonuclease superfamilies: structural analysis and phylogenetic distribution |
Q64892986 | Expression of the Arabidopsis Xrn4p 5'-3' exoribonuclease facilitates degradation of tombusvirus RNA and promotes rapid emergence of viral variants in plants. |
Q43913903 | FRIGIDA delays flowering in Arabidopsis via a cotranscriptional mechanism involving direct interaction with the nuclear cap-binding complex |
Q48290299 | Genome-Wide Mapping of Uncapped and Cleaved Transcripts Reveals a Role for the Nuclear mRNA Cap-Binding Complex in Cotranslational RNA Decay in Arabidopsis. |
Q36665764 | Genome-based analysis of Chlamydomonas reinhardtii exoribonucleases and poly(A) polymerases predicts unexpected organellar and exosomal features |
Q33219824 | Genome-wide screen identifies host genes affecting viral RNA recombination |
Q35562070 | Heat-induced ribosome pausing triggers mRNA co-translational decay in Arabidopsis thaliana. |
Q37699519 | Host Factors in the Infection Cycle of Bamboo mosaic virus |
Q30627276 | In plants, decapping prevents RDR6-dependent production of small interfering RNAs from endogenous mRNAs |
Q83100725 | In vitro assays of 5' to 3'-exoribonuclease activity |
Q36801398 | Interaction of host cell microRNAs with the HCV RNA genome during infection of liver cells |
Q36927344 | Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm |
Q39135907 | Interconnections between mRNA degradation and RDR-dependent siRNA production in mRNA turnover in plants. |
Q85636434 | LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development |
Q53443383 | Loss of Arabidopsis 5'-3' Exoribonuclease AtXRN4 Function Enhances Heat Stress Tolerance of Plants Subjected to Severe Heat Stress. |
Q60042605 | Loss-of-Susceptibility Mutants of Arabidopsis thaliana Reveal an Essential Role for eIF(iso)4E during Potyvirus Infection |
Q33674380 | Methylation protects microRNAs from an AGO1-associated activity that uridylates 5' RNA fragments generated by AGO1 cleavage |
Q28344647 | Multiple snoRNA gene clusters from Arabidopsis |
Q57791525 | NanoPARE: parallel analysis of RNA 5' ends from low-input RNA |
Q28202730 | Plant snoRNAs: functional evolution and new modes of gene expression |
Q46770241 | Polysomes, stress granules and processing bodies: a dynamic triumvirate controlling cytoplasmic mRNA fate and function |
Q36432141 | Promotion of Bamboo Mosaic Virus Accumulation in Nicotiana benthamiana by 5'→3' Exonuclease NbXRN4. |
Q26864165 | Proteins involved in the degradation of cytoplasmic mRNA in the major eukaryotic model systems |
Q57291902 | RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling |
Q37441871 | RNA Quality Control as a Key to Suppressing RNA Silencing of Endogenous Genes in Plants |
Q38013753 | RNA decay and RNA silencing in plants: competition or collaboration? |
Q92717026 | RNA degradomes reveal substrates and importance for dark and nitrogen stress responses of Arabidopsis XRN4 |
Q50488241 | RRP41L, a putative core subunit of the exosome, plays an important role in seed germination and early seedling growth in Arabidopsis |
Q35082909 | Reactive oxygen species mediate Na+-induced SOS1 mRNA stability in Arabidopsis |
Q36516803 | Reconsidering the nature and mode of action of metabolite retrograde signals from the chloroplast. |
Q37694319 | Regulation of mRNA decay in plant responses to salt and osmotic stress. |
Q41882734 | Ribosome biogenesis requires a highly diverged XRN family 5'->3' exoribonuclease for rRNA processing in Trypanosoma brucei. |
Q35172256 | Roles of a Trypanosoma brucei 5'->3' exoribonuclease homolog in mRNA degradation |
Q48144858 | Second-Site Mutagenesis of a Hypomorphic argonaute1 Allele Identifies SUPERKILLER3 as an Endogenous Suppressor of Transgene Posttranscriptional Gene Silencing. |
Q45368240 | Silencing of NbXrn4 facilitates the systemic infection of Tobacco mosaic virus in Nicotiana benthamiana |
Q51809357 | Silencing of Nicotiana benthamiana Xrn4p exoribonuclease promotes tombusvirus RNA accumulation and recombination. |
Q39319517 | Sm-Like Protein-Mediated RNA Metabolism Is Required for Heat Stress Tolerance in Arabidopsis. |
Q26765946 | Small RNAs: essential regulators of gene expression and defenses against environmental stresses in plants |
Q90388650 | SnRK2 Protein Kinases and mRNA Decapping Machinery Control Root Development and Response to Salt |
Q35113601 | Stress-induced endogenous siRNAs targeting regulatory intron sequences in Brachypodium. |
Q35914979 | Surveillance of 3' Noncoding Transcripts Requires FIERY1 and XRN3 in Arabidopsis |
Q37989882 | The 5' → 3' exoribonuclease XRN1/Pacman and its functions in cellular processes and development |
Q60951494 | The 5'-3' Exoribonuclease XRN4 Regulates Auxin Response via the Degradation of Auxin Receptor Transcripts |
Q28542463 | The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana |
Q79330583 | The exoribonuclease XRN4 is a component of the ethylene response pathway in Arabidopsis |
Q54484163 | The late steps of plant nonsense-mediated mRNA decay. |
Q38429034 | The role of LARP1 in translation and beyond |
Q36266055 | The sRNAome mining revealed existence of unique signature small RNAs derived from 5.8SrRNA from Piper nigrum and other plant lineages |
Q50536551 | The second face of a known player: Arabidopsis silencing suppressor AtXRN4 acts organ-specifically |
Q43631197 | Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation |
Q43189177 | Two different mechanisms control ethylene sensitivity in Arabidopsis via the regulation of EBF2 expression |
Q35171631 | Unraveling the mechanistic features of RNA polymerase II termination by the 5'-3' exoribonuclease Rat1 |
Q37080390 | Uridylation prevents 3' trimming of oligoadenylated mRNAs |
Q37092102 | XRN 5'→3' exoribonucleases: structure, mechanisms and functions. |
Q34365908 | mRNA deadenylation by PARN is essential for embryogenesis in higher plants |
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