Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA.

scientific article

Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKQ172
P932PMC publication ID2910052
P698PubMed publication ID20338880
P5875ResearchGate publication ID42589004

P50authorPamela J. GreenQ18719177
Joanna KufelQ72095031
Monika Zakrzewska-PlaczekQ83909385
P2093author name stringFrederic F Souret
Grzegorz J Sobczyk
P2860cites workHuman 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sitesQ24317135
Mfold web server for nucleic acid folding and hybridization predictionQ24498105
The final step in the formation of 25S rRNA in Saccharomyces cerevisiae is performed by 5'-->3' exonucleasesQ24539838
Polyadenylation of ribosomal RNA in human cellsQ24546450
Exoribonuclease superfamilies: structural analysis and phylogenetic distributionQ24555225
The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage siteQ24595513
Efficient termination of transcription by RNA polymerase I requires the 5' exonuclease Rat1 in yeastQ24657729
A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue CulturesQ25938988
Structure and function of the 5′→3′ exoribonuclease Rat1 and its activating partner Rai1Q27653658
Clustal W and Clustal X version 2.0Q27860517
Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thalianaQ27860555
Making ribosomesQ27930690
Identification of a regulated pathway for nuclear pre-mRNA turnover.Q27931532
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymeraseQ27932117
Polyadenylation of rRNA in Saccharomyces cerevisiae.Q27932222
RNA degradation by the exosome is promoted by a nuclear polyadenylation complexQ27932438
Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectivelyQ27933347
Budding yeast RNA polymerases I and II employ parallel mechanisms of transcriptional terminationQ27933929
The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.Q27934493
Ribosome synthesis in Saccharomyces cerevisiaeQ27935371
A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesisQ27937306
Rat1p and Rai1p function with the nuclear exosome in the processing and degradation of rRNA precursorsQ27938577
A versatile binary vector system with a T-DNA organisational structure conducive to efficient integration of cloned DNA into the plant genomeQ50788144
A link between RNA metabolism and silencing affecting Arabidopsis development.Q51956889
A link between mRNA turnover and RNA interference in Arabidopsis.Q52085930
Identification of protein factors and U3 snoRNAs from aBrassica oleraceaRNP complex involved in the processing of pre-rRNAQ59291042
The Rat1p 5′ to 3′ Exonuclease Degrades Telomeric Repeat-Containing RNA and Promotes Telomere Elongation in Saccharomyces cerevisiaeQ63977010
Splicing-independent processing of plant box C/D and box H/ACA small nucleolar RNAsQ77918506
The exoribonuclease XRN4 is a component of the ethylene response pathway in ArabidopsisQ79330583
Targeting of aberrant mRNAs to cytoplasmic processing bodiesQ27939158
Processing of the precursors to small nucleolar RNAs and rRNAs requires common componentsQ27940213
Improved method for high efficiency transformation of intact yeast cellsQ28131608
The tandem affinity purification (TAP) method: a general procedure of protein complex purificationQ28131621
Yeast vectors for the controlled expression of heterologous proteins in different genetic backgroundsQ28131643
The highways and byways of mRNA decayQ28284717
5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNAQ28488947
Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3'ETS in ArabidopsisQ28755268
Recruitment of factors linking transcription and processing of pre-rRNA to NOR chromatin is UBF-dependent and occurs independent of transcription in human cellsQ28910336
RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent siteQ29614775
The many pathways of RNA degradationQ29615760
Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNAQ33590679
In vivo disruption of Xenopus U3 snRNA affects ribosomal RNA processingQ33920876
Identification and functional analysis of two U3 binding sites on yeast pre-ribosomal RNAQ33937656
Active-site mutations in the Xrn1p exoribonuclease of Saccharomyces cerevisiae reveal a specific role in meiosisQ33959116
Visualization of Nucleolar GenesQ34054255
Construct design for efficient, effective and high-throughput gene silencing in plants.Q34092911
Decay of mRNAs targeted by RISC requires XRN1, the Ski complex, and the exosomeQ34366308
The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo modelQ34511126
ETHYLENE-INSENSITIVE5 encodes a 5'-->3' exoribonuclease required for regulation of the EIN3-targeting F-box proteins EBF1/2.Q34999022
The nucleolus: a site of ribonucleoprotein maturationQ35145834
Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasmQ35583606
Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in ArabidopsisQ35613446
Cytoplasmic decay of intergenic transcripts in Saccharomyces cerevisiaeQ35641725
Degradation of a polyadenylated rRNA maturation by-product involves one of the three RRP6-like proteins in Arabidopsis thalianaQ36540208
A plant snoRNP complex containing snoRNAs, fibrillarin, and nucleolin-like proteins is competent for both rRNA gene binding and pre-rRNA processing in vitroQ36700946
Primary processing of mammalian rRNA involves two adjacent cleavages and is not species specificQ36919793
Powering through ribosome assemblyQ37426589
Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1.Q38310518
Mutational analysis of exoribonuclease I from Saccharomyces cerevisiaeQ38335035
Widespread impact of nonsense-mediated mRNA decay on the yeast intronomeQ41999821
The 5' external transcribed spacer in mouse ribosomal RNA contains two cleavage sites.Q42068018
Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAsQ42630007
AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targetsQ44984049
Arabidopsis FIERY1, XRN2, and XRN3 are endogenous RNA silencing suppressorsQ46907096
Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptomeQ48075748
Effectiveness of RNA interference in transgenic plantsQ48190210
P275copyright licenseCreative Commons Attribution-NonCommercial 2.5 GenericQ19113746
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesImageQuantQ112270642
P433issue13
P407language of work or nameEnglishQ1860
P921main subjectArabidopsis thalianaQ158695
P304page(s)4487-4502
P577publication date2010-03-24
P1433published inNucleic Acids ResearchQ135122
P1476titleArabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA
P478volume38

Reverse relations

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